mRNA_F-serratus_M_contig79.19166.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig79.19166.1 vs. uniprot
Match: D8LCI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI9_ECTSI) HSP 1 Score: 609 bits (1570), Expect = 3.100e-208 Identity = 357/667 (53.52%), Postives = 450/667 (67.47%), Query Frame = 3
Query: 156 MRMHQKTVLQKAALLVRAGMMEPPKWYAAIKQVPPFHRRPSDGIETLKLPWDALAQDFASKNPHMVEDSEWLGPNGYKPGAPPISYVFAKRQYALMQNGFKKDEAYKRTHDAMKAEKAADLATIRRRVKEASVLAGARPSFVADDDVYSGLRYWQTMMNETPYTDWDLAAKQALDVFLRREVLGWDDEQMKFAQSAKDGTAEALEAEIKRLRVSLFPETKTKDYAFPSDVVRPWGEEKEQGAAKEDDEFDELVE----IEGEEK------EEWKSPLLDADWKDSLRRFQEMAKEVSYELDWSPDDRQHLNSFLVGRCIRRSVLEEAFAWIPDPVAEALTKIGADT-------------EDATAEYDAAGQDLDHDHIDGDDRIRVSDADGANAEVEARPAVEGVGEEVLGHQQQXXXXXXXXXXXEENWMAGEELEGFKGDWMGVARRRAGKVQTTLAIRVXXXXXXXXXXXXXXXXXLE-----------KNLKAVLIQAKRQLFPDLVLEEDEQGGKESVEDRRARIAAKKKIMLADLEWENEEVEAEREVMISKLKAGVGPPKNDSLEEVRKKRLSKGTWKAERRRLLKLEKELYEKQQSGHHNETEDGEAGEERLASIPDRVVESEILRAKAREFYAKEKARMKRSAKLWADAAAAGKEAKA 2054
MR+ QKT LQK ++LV+AGMMEPPKWYAA KQVPPF RRPS+GIE LKLPWD LA +FAS+NPHMVED EWLGP G++PGAPPIS+VFAKRQYALMQNG K++AY+RTH MK E++AD+A +++ V+EAS +AG RPSFV+DDDVYSGL++WQ+MM ET Y++WDLAAK LD FLRRE++GWDD+++K AQSA+DGT+ ALEAEI RLRV+LFPETKT +YA+PSDVVRP + A ++++E D VE +EGEE EEW S L+ W + RRF+EM +EV YELDWS +DR+ L++F+VGRCIRRS+L+EAF W+PDPVAEAL K+ A E ATAE + G D D DG E W++G ELE F GDWM +AR+R G+ T +A XXXXXXXXXX +E NL+AVL QAKRQL PDLVLE DE+ G S E+RR + AA++KI+++ LEWE EE++ +R+ + KL+AG+ + D +E VRKKRL+KGTWKAERRRLL LEK+LY ++Q+G E E + + D VVESE +R KA EFYAKEKAR+K+ KL A+AAA AKA
Sbjct: 1 MRLQQKTALQKVSVLVKAGMMEPPKWYAAAKQVPPFQRRPSNGIEALKLPWDTLANEFASRNPHMVEDPEWLGPRGFRPGAPPISHVFAKRQYALMQNGLMKEDAYERTHALMKMERSADVAAVQKMVREASSMAGGRPSFVSDDDVYSGLKFWQSMMQETSYSEWDLAAKLGLDAFLRRELIGWDDDRLKLAQSARDGTSAALEAEINRLRVTLFPETKTAEYAYPSDVVRPRDD-----ANEDEEELDGDVEDEEGVEGEEALARDGTEEWISARLNCSWSATQRRFEEMTEEVGYELDWSVEDRRSLDNFIVGRCIRRSILDEAFTWLPDPVAEALAKVNASILASPPXXXXXXXXEAATAEGEGTG---DEDDKDG-----------------------------------------------ERWVSGPELEAFTGDWMSLARKRTGRTTTGVAAXXXXXXXXXXXXRRGVARDVEAVVGRPSMALQSNLRAVLTQAKRQLLPDLVLEVDEKAGPVSAEERRVKDAARQKIVMSALEWEKEEIDEQRKAVTDKLRAGMTVEQADPIEAVRKKRLAKGTWKAERRRLLNLEKKLYYEKQAG----LEHDEGPATAIPELVDDVVESESIRRKADEFYAKEKARIKKEIKLQAEAAAIAAAAKA 608 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig79.19166.1 >prot_F-serratus_M_contig79.19166.1 ID=prot_F-serratus_M_contig79.19166.1|Name=mRNA_F-serratus_M_contig79.19166.1|organism=Fucus serratus male|type=polypeptide|length=644bp MRMHQKTVLQKAALLVRAGMMEPPKWYAAIKQVPPFHRRPSDGIETLKLPback to top mRNA from alignment at F-serratus_M_contig79:475155..509904+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig79.19166.1 ID=mRNA_F-serratus_M_contig79.19166.1|Name=mRNA_F-serratus_M_contig79.19166.1|organism=Fucus serratus male|type=mRNA|length=34750bp|location=Sequence derived from alignment at F-serratus_M_contig79:475155..509904+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig79:475155..509904+ >mRNA_F-serratus_M_contig79.19166.1 ID=mRNA_F-serratus_M_contig79.19166.1|Name=mRNA_F-serratus_M_contig79.19166.1|organism=Fucus serratus male|type=CDS|length=3864bp|location=Sequence derived from alignment at F-serratus_M_contig79:475155..509904+ (Fucus serratus male)back to top |