mRNA_F-serratus_M_contig79.19160.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: A0A6H5JD28_9PHAE (DNL-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD28_9PHAE) HSP 1 Score: 224 bits (570), Expect = 1.660e-67 Identity = 115/176 (65.34%), Postives = 135/176 (76.70%), Query Frame = 1
Query: 208 SNGSTNKIEAPLDVQVTHVDATPGKGAREAGVDDTSDAKKSTTLDENRKNLG---DKVGGDQEPLTVRFLDVPGSEETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDASGGWDIQKITNRIGEAECHVVNEDNVMELTLVDIAGKSSK 726
S ST K LDV VTHVDA A D+ ++ ++ +E+R +G G + +P VRFLDVPGSE+TR EKMTIVFTCTVCETRTAKTFAKLSY KGVV+ARCPGCHN+HLIADRLGWFEEAGD + GWDI+KITNRIGE++CHVVNEDNVMEL LVDIAGK+++
Sbjct: 136 SGSSTGK----LDVHVTHVDAA-------AAADNKAEDEREMMPEEDRVPVGAGSTAQGSEDKPNVVRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLGWFEEAGDGADGWDIEKITNRIGESDCHVVNEDNVMELNLVDIAGKTTR 300
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: D7FSR0_ECTSI (DNL-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR0_ECTSI) HSP 1 Score: 211 bits (538), Expect = 5.980e-65 Identity = 97/118 (82.20%), Postives = 109/118 (92.37%), Query Frame = 1
Query: 373 GGDQEPLTVRFLDVPGSEETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDASGGWDIQKITNRIGEAECHVVNEDNVMELTLVDIAGKSSK 726
G + +P VRFLDVPGSE+TR EKMTIVFTCTVCETRTAKTFAKLSY KGVV+ARCPGCHN+HLIADRLGWFEEAGD + GWDI+KITNRIGE++CHVVNEDNVMEL LVDIAGK+++
Sbjct: 18 GSEDKPNVVRFLDVPGSEQTREEKMTIVFTCTVCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLGWFEEAGDGADGWDIEKITNRIGESDCHVVNEDNVMELNLVDIAGKTTR 135
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: A0A7S2LH97_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LH97_9STRA) HSP 1 Score: 131 bits (329), Expect = 3.920e-33 Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 1
Query: 379 DQEPLTVRFLDVPGSEETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDA-SGGWDIQK-ITNRIGEAECHVVNEDNVMELTLVDIAGKSSK 726
D E L+ F DVPG++ T+ + + I++TCTVC TR+AK F + +Y GVV+ RCPGC NLHLIADRLGWFE+ + GGWDI+K I + GE V DNV+ELTL DI GK +
Sbjct: 88 DTEQLSNSFTDVPGTKNTKQKTLAIIYTCTVCNTRSAKQFTEHAYRHGVVLVRCPGCQNLHLIADRLGWFEDMDEKIEGGWDIEKAILTKTGENNVTAVTNDNVLELTLEDIVGKKDE 205
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: A0A7S1ZZB8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZB8_TRICV) HSP 1 Score: 126 bits (316), Expect = 1.830e-31 Identity = 62/114 (54.39%), Postives = 81/114 (71.05%), Query Frame = 1
Query: 376 GDQEPLTVRFLDVPGSEETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDASGGWDIQKITNRIGEAECHVVNEDNVMELTLVDIAGK 717
G P ++ D+PG+E T +K+ IV+TC +C TR+AK F + +YN GVV+ RCPGC NLHLIADRLG+FE+ D GGWDIQK ++GE VN+DNV+ELTL D+ GK
Sbjct: 57 GGSPPSSLHLSDIPGAE-TGGKKLAIVYTCKLCNTRSAKKFTEQAYNHGVVMVRCPGCENLHLIADRLGFFEDRAD--GGWDIQKALAKMGE-NVRAVNDDNVLELTLEDVWGK 166
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: A0A835YZV4_9STRA (DNL zinc finger-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZV4_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.480e-29 Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 403 FLDVPGSEETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDASGGWDIQ-KITNRIGEAECHVVNEDNVMELTLVDIAG 714
F DVPG+ KM +++TC VCETR AK F+KL+Y +GVV+ RCPGC+NLHL+ADRLGWF++ GWDI+ ++ +R C VV +N+ME+TL DI G
Sbjct: 67 FKDVPGATHAPGGKMVMIYTCKVCETRAAKGFSKLAYEQGVVLVRCPGCNNLHLVADRLGWFDDE-----GWDIESRVMSRTEGGNCSVVTHENIMEITLEDIQG 166
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: A0A6G0WW39_9STRA (DNL-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW39_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.840e-28 Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 382 QEPLTVRFLDVPGSEETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDASGGWDIQKITNRIGEAECHVVNEDNVMELTLVDIAGKSSKPS 732
Q P + DVPG+ T+ EK +++TCTVC+TR AKT +K +Y GVV+ RCP C NLHL+ADRLGWFE+ GG+DIQ I GE VV D+++ELT DI G++++P+
Sbjct: 43 QTPPSDSPADVPGATLTKGEKFVMLYTCTVCDTRAAKTISKHAYYHGVVLIRCPTCQNLHLVADRLGWFED-----GGYDIQTILAEKGE-NARVVTHDDILELTEADILGQAAEPT 153
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: W4GQX1_9STRA (DNL-type domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQX1_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.180e-25 Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 409 DVPGSEETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDASGGWDIQKITNRIGEAECHVVNEDNVMELTLVDIAGKSSKPSA 735
D+PG+ T +K +V+TCTVC+TR AKT +K +Y GVV+ RCP C NLHLIADRLGWFE+ GG+D+Q++ G +V DN++ELT D+ G + S+
Sbjct: 80 DIPGATLTSGDKFVMVYTCTVCDTRAAKTISKHAYYNGVVLIRCPTCQNLHLIADRLGWFED-----GGYDVQEVLAAKG-GNARIVTHDNILELTEADVLGTPATDSS 182
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: A0A6A3LLY1_9STRA (DNL-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LLY1_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.840e-25 Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 385 EPLTVRFLDVPGSE--ETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDASGGWDIQKITNRIGEAECHVVNEDNVMELTLVDIAGKSSK 726
EP T D G+ E+ EK +V+TC+VCETR AKT +K +Y KGVV+ RCPGC NLHL+ADRLGWFE+ D++ D++ + R GE E V +DNV+ELT DI G S+
Sbjct: 79 EPTTEAAADYSGAPGVESSGEKFVMVYTCSVCETRAAKTISKHAYYKGVVLVRCPGCENLHLVADRLGWFED--DST---DVESLLQRKGE-EVLFVTDDNVLELTEKDILGSKSE 188
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: A0A485LB80_9STRA (Aste57867_18627 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB80_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.840e-25 Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 379 DQEPLTVRFLDVPGSEETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDASGGWDIQKITNRIGEAECHVVNEDNVMELTLVDIAG 714
D P VPG+ T EK +V+TCTVC+TR AKT +K +Y GVV+ RCP C NLHLIADRLGWFE+ GG+D+Q++ G +V DN++ELT D+ G
Sbjct: 56 DDPPSAPDAAAVPGATLTSGEKFVMVYTCTVCDTRAAKTISKHAYYNGVVLIRCPTCQNLHLIADRLGWFED-----GGYDVQEVIAAKG-GNARLVTHDNILELTEADVLG 161
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Match: A0A7S4MTK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTK6_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.280e-24 Identity = 54/97 (55.67%), Postives = 73/97 (75.26%), Query Frame = 1
Query: 409 DVPGSEETRAEKMTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEAGDASGGWDIQKITNRIGEAECHVVNEDNVMELTL 699
D+PG+E+ +K+ IVFTCTVC TR+AK F + +Y GVV+ RCPGC NLHLIADRLG+F + + GGWDIQK ++GE + V++DNV+ELT+
Sbjct: 191 DIPGAEK-GGKKLAIVFTCTVCSTRSAKKFTERAYTHGVVMVRCPGCENLHLIADRLGFFGDDKE-EGGWDIQKAMAKMGE-DVRAVSDDNVLELTM 284 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig79.19160.1 >prot_F-serratus_M_contig79.19160.1 ID=prot_F-serratus_M_contig79.19160.1|Name=mRNA_F-serratus_M_contig79.19160.1|organism=Fucus serratus male|type=polypeptide|length=112bp MTIVFTCTVCETRTAKTFAKLSYNKGVVVARCPGCHNLHLIADRLGWFEEback to top mRNA from alignment at F-serratus_M_contig79:264996..269236+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig79.19160.1 ID=mRNA_F-serratus_M_contig79.19160.1|Name=mRNA_F-serratus_M_contig79.19160.1|organism=Fucus serratus male|type=mRNA|length=4241bp|location=Sequence derived from alignment at F-serratus_M_contig79:264996..269236+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig79:264996..269236+ >mRNA_F-serratus_M_contig79.19160.1 ID=mRNA_F-serratus_M_contig79.19160.1|Name=mRNA_F-serratus_M_contig79.19160.1|organism=Fucus serratus male|type=CDS|length=672bp|location=Sequence derived from alignment at F-serratus_M_contig79:264996..269236+ (Fucus serratus male)back to top |