mRNA_F-serratus_M_contig79.19159.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: D7FSQ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ9_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 1.830e-139 Identity = 218/314 (69.43%), Postives = 244/314 (77.71%), Query Frame = 3
Query: 732 GEKLTPSKN-----ASGGPNRALEMTPTKRR--AFGRKLGSISKPPVTIPPAVSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLLLDAGGSDGLELNKHNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPHKVED-YGFDVDMILKMPLRLTGSKEGHTMYLYRRKNVKPGLPIARITEVDPFFARGVDLCRNGGNG--TELTKHVEARFVENTSGGIRTRRSKRLQA 1643
GE TPSK A GP R L MTPTK++ AFGRK G+ K V +P VSRVY +VAKATG++GGNGS GAIYGELT G MQKVVNVLKE TGFDE SSFIDVG+GLGKPNFHVAQDPG EISYGLELE VRW+LS+ NHR +L D G +G+ + KHNLFFA GD+L +TFDPFTHVYMFDIGFPP TL EIA FN S+ARHL+SYQ P KV D YGFDVD++L+ PL LTGS EGHTMYL+RRKNV+PGL I RI EVDPFFA GV LCRN G G +ELT HVE F NTSGG+RTRRS+R A
Sbjct: 144 GESATPSKKKKTEAALEGPVRTLSMTPTKKKRGAFGRKDGTPMKARVDVPEEVSRVYAIVAKATGNIGGNGSDGAIYGELTVGGMQKVVNVLKEHTGFDEMSSFIDVGAGLGKPNFHVAQDPGVEISYGLELEVVRWELSIANHRMVLQDEG-DNGVHVAKHNLFFARGDILGCETFDPFTHVYMFDIGFPPATLHEIAKKFNNSKARHLVSYQVPKKVIDVYGFDVDLVLQQPLSLTGSGEGHTMYLFRRKNVEPGLKIERIDEVDPFFAEGVKLCRNRGEGGGSELTAHVEGAFERNTSGGVRTRRSRRANA 456
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: K0R0G2_THAOC (DOT1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0G2_THAOC) HSP 1 Score: 244 bits (624), Expect = 2.200e-71 Identity = 137/331 (41.39%), Postives = 189/331 (57.10%), Query Frame = 3
Query: 675 PKGGLTALRLGLEDDSEEDGEKLTPSKNASGGPNRALEMTPTKRRAFGRKLGSISKPPVTIPPAVSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLLLDA------GGSDGLELNKHNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPH-KVEDYGFDVDMILKMPLRLTGSKEGHTMYLYRRKNVKPGLPIARITEV----DPFFARGVDLCRNGGNGTELTKHVEARFVENTSGGIRTRRSKR 1634
P+ +L L + E D + SK+ + G A ++T + FGR + I IP VSRVY +V TGSVGGNG GAIYGELT G MQK+ N++ + T D+ S FIDVG GLGKPN HVAQ PG E SYG+EL RW L + N +++++ A G G E H L+FAHGD+ A FDPFTHVYMFDIGFPP ++A +FN SQ+ +LI Y P +EDYGF++++I++ P + GS E HT Y+YRR + ++ DP FA+ ++C++G H + ++ G+ +RR R
Sbjct: 91 PRSPRRSLDLSSVREDEGDSTDIDESKSTAEG---AGKVTGKTKLPFGRNVKQIE-----IPRNVSRVYKIVHSQTGSVGGNGHGGAIYGELTTGSMQKMTNLMMKHTNLDKTSRFIDVGCGLGKPNLHVAQYPGVEFSYGIELYHTRWMLGMSNLQQVMVAAMSDFENGKDKGDEAIGHRLYFAHGDITEATHFDPFTHVYMFDIGFPPTLFHQLAEMFNNSQSEYLICYHGPKLMIEDYGFNIELIVQTPTSMHGSSEVHTGYIYRRSETAAEAKSCKTKKLGVLCDPLFAKAYEMCQSGLKNV----HDHTNAIVESNWGVSSRRRTR 409
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: B8BQJ6_THAPS (DOT1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQJ6_THAPS) HSP 1 Score: 235 bits (599), Expect = 3.680e-68 Identity = 133/315 (42.22%), Postives = 184/315 (58.41%), Query Frame = 3
Query: 756 NASGGPNRALEMTPTKRRAFGRKLGSISKPPVTIPPAVSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLL----LDAGGSDGLELNK---HNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPH-KVEDYGFDVDMILKMPLRLTGSKEGHTMYLYRR--------------KNVKPGLPIARITEVDPFFARGVDLCRNGGNGTELTKHVEARFVENTSGGIRTRRSKR 1634
+A P +A + + T++ FG SI IP VSRVY +V K TGS+GGNG GAIYGEL G MQK+ N++ E TG + S FIDVG GLGKPN HVAQ PG E SYG+E+E VRW L + N ++L DA + + + H + AHGD+ A FDPFTHVYMFDIGFPP ++A +FN S++ +LI Y P +E Y FD++++++ P + GS E HT Y+YRR K+ K G+P DP FA+ +LC++ + +E+++H+ + E+ G RRS R
Sbjct: 83 SAKSSPTKATKESNTRKLPFGGNTKSID-----IPTNVSRVYNIVNKHTGSIGGNGHGGAIYGELRVGSMQKMTNLMMEHTGLNVNSRFIDVGCGLGKPNLHVAQHPGVEFSYGIEMENVRWMLGIANLHQVLEQAKRDAVNDEEISEDAKIGHACYLAHGDITEANFFDPFTHVYMFDIGFPPLLFHQLAEMFNSSESEYLICYHGPKLMIETYEFDIELLVQTPTSMHGSSEVHTGYIYRRTAENKRKSKKQTGCKSKKYGVPC------DPLFAKAWELCKS--DLSEVSEHIAEQIEEHM--GATKRRSTR 382
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: A0A7S2YHF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHF8_9STRA) HSP 1 Score: 232 bits (592), Expect = 7.120e-66 Identity = 139/301 (46.18%), Postives = 174/301 (57.81%), Query Frame = 3
Query: 741 LTPSKNASGGPNRALEMTPTKRR-AFGRKLGSISKPPVTIPPAVSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLLLDAGGSDGLELNKHNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPHKVED-YGFDVDMILKMPLRLTGSKEGHTMYLYRRKNVKPGLPIARITE-----VDPFFARGVDLCRNGGNGTELTKHVEARFVENTSGGIRTR 1622
+TPSK+ + A +P KRR FGR + + V +VY L+ K TGS+GGN S+G IYGELT G MQK+VN++KE T FD S FIDVGSG+GKPNFHVAQDPG EISYGLE++ RW LS+ N R LD D E +H F D+ A +FDPFTHVYMF IGFPP +A ++NRS++ +LI Y P + D Y F+V+++ K P + GSKEGHT Y+YRR TE VDP FA G+ R G + L V S G TR
Sbjct: 211 VTPSKSGAS----ATAQSPAKRRIVFGRYSE------IDVTERVKKVYRLIRKLTGSIGGNASNGPIYGELTMGSMQKMVNLMKEHTHFDASSKFIDVGSGIGKPNFHVAQDPGVEISYGLEIDADRWLLSM-NCLRGTLDLAAQD--EDVQHRCVFVQEDIRQAHSFDPFTHVYMFSIGFPPDLWITLADVWNRSKSPYLICYHSPKDIIDCYEFEVELLAKTPTSMHGSKEGHTGYVYRRTTSASTTAAESSTETTVERVDPLFAGGIATIRGG--LSNLQTWVSTTLNAKMSSGPSTR 496
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: A0A7S3Q7R7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7R7_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.170e-65 Identity = 129/278 (46.40%), Postives = 165/278 (59.35%), Query Frame = 3
Query: 849 VTIPPAVSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLLLDA-----GGSDGLELNKHNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPHKVED-YGFDVDMILKMPLRLTGSKEGHTMYLYRR----KNVKPGLPIARITEVDPFFARGVDLCRNGGNGTELTKHVEARFVENTSGGIRTRRSKRLQAP*R 1652
VTI P VY LV K TGS+GGNG GAIYGELT G MQK++N++KE T F+ S FIDVG GLGKPN HVAQDP E SYG+E+E VRW L + N + L +A G E +H AHGD+ A+ FDPFTHVYMFDIGFPP +++ +FNRSQ+ +LI Y P + D YGF+V++I++ P + GS EGH Y+YRR + + GL DP F + N L + VE +N + R S++ QAP R
Sbjct: 150 VTILPKTRTVYKLVNKMTGSIGGNGRGGAIYGELTMGSMQKMINLMKEHTNFNSSSRFIDVGCGLGKPNIHVAQDPQVEFSYGIEMEHVRWVLGMSNLKVSLKEACRQEAEGQTEEECIRHRCMLAHGDITEAQFFDPFTHVYMFDIGFPPKLFKQLGKMFNRSQSEYLICYHRPSLMVDRYGFNVELIIQEPTSMHGSSEGHMGYIYRRVGRKQKIGKGLQSVDGVPCDPLFKDAWLSTKK--NVVPLYREVERVVKDNLNS---QRPSRQRQAPTR 422
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: A0A7S2PSU5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSU5_9STRA) HSP 1 Score: 228 bits (581), Expect = 5.110e-65 Identity = 119/253 (47.04%), Postives = 159/253 (62.85%), Query Frame = 3
Query: 837 SKPPVTIPPAVSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLLLDA-----------GGSDGLELNKHNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPHKVED-YGFDVDMILKMPLRLTGSKEGHTMYLYRRK---NVKPGLPIARI-TEVDPFFARGVDLCRNG 1547
+K + +P V RVY ++ K TGS+GGNG GAIYGELT G MQK+ N++ E T ++S FIDVG GLGKPN HVAQ PG E SYG+E+E VRW L + N ++L A G DG ++ +H FFAHGD+ A FDPFTHVYMFDIGFPP ++A +FN SQ+ +LI Y P + D Y F+V+++++ P + GS EGH Y+YRR N + ++ T DP FA+ ++CR G
Sbjct: 140 NKSTIKVPTNVKRVYEIINKHTGSIGGNGHGGAIYGELTVGSMQKMTNLMIEYTDLSKESRFIDVGCGLGKPNLHVAQYPGVEFSYGIEMEHVRWMLGMANLDQVLKAAQKDIAFEEAKKDGDDGSKI-EHRCFFAHGDITEASFFDPFTHVYMFDIGFPPRLFHQLAEMFNNSQSEYLICYHGPKLMIDRYEFNVELLVQTPTSMHGSAEGHQGYIYRRTKKANKRNSCSTSQFETPCDPLFAKAWEVCREG 391
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: A0A7S4QC13_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QC13_9STRA) HSP 1 Score: 229 bits (583), Expect = 7.280e-65 Identity = 120/230 (52.17%), Postives = 151/230 (65.65%), Query Frame = 3
Query: 801 KRRAFGRKLGSISKPPVTIPPAVSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLLLDA-----GGS----DGLELNKHNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPH-KVEDYGFDVDMILKMPLRLTGSKEGHTMYLYRR 1460
KR AFG + +T P V RVY +V + TGS+GGNG GAIYGELT G MQK+VN++K TG DE S FIDVG GLGKPN HVAQDPG + SYG+E+E VRW L + N ++L +A GGS G + H AHGD+ A+ FDPFTHVYMFDIGFPP ++A +FNRS + +LI Y P VE YGFD+++I+++ + GS EGH Y+YRR
Sbjct: 168 KRNAFGHTAVNA----ITYPANVKRVYQVVNRQTGSIGGNGHGGAIYGELTVGSMQKMVNMMKVHTGLDENSRFIDVGCGLGKPNMHVAQDPGVQFSYGIEMEHVRWLLGMSNLDQVLREAQRQDRGGSVLDVSGNSIIGHRCTLAHGDITEAQFFDPFTHVYMFDIGFPPRLFYQLADMFNRSSSPYLICYHGPKLMVERYGFDIELIIQLSTSMHGSSEGHMGYIYRR 393
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: A0A0P1A7P9_PLAHL (DOT1 domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7P9_PLAHL) HSP 1 Score: 220 bits (560), Expect = 1.500e-62 Identity = 122/274 (44.53%), Postives = 166/274 (60.58%), Query Frame = 3
Query: 867 VSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLLLDAGGSDGLELNKHNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPHKVED-YGFDVDMILKMPLRLTGSKEGHTMYLYRR----------KNVKPGLPIARIT-------EVDPFFARGVDLCRNGGNGTELTKHVEARFVENTSGGIRTRRSKR 1634
VS VY + K TGS+GGN + GAIYGE+T Q+VV+ LKE E S FIDVGSGLGKPNFHVA DPG ++SYG+ELEE+RW LS+ N R +L + L + F GD+ A TF+PF+HVY FD+GFPP + ++A++FNRS A++ S+ P KV D YGF V+ I ++ + GS EGH Y YRR KN K ++ ++ +VDP F++G++L + G G + + V F + +G RTRR KR
Sbjct: 75 VSEVYKAIRKQTGSLGGNAAGGAIYGEITQASFQRVVDYLKEFCELSESSRFIDVGSGLGKPNFHVAVDPGVQLSYGIELEELRWHLSLHNLRSVL----SLESQRLKPVSTVFTAGDITHAHTFEPFSHVYSFDVGFPPDVMDKMALMFNRSSAKYYASFHAPRKVVDMYGFAVENIGRVATSMAGSSEGHQCYFYRRLASTGGDKKVKNDKVEAQVSSVSNDINSWIDVDPLFSKGIELLKGGREG--MIEWVIDFFAQANAG--RTRRQKR 340
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: A0A7S3KVJ6_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KVJ6_9STRA) HSP 1 Score: 220 bits (560), Expect = 3.120e-62 Identity = 130/295 (44.07%), Postives = 170/295 (57.63%), Query Frame = 3
Query: 771 PNRALEMTPTKRRA-FGRKLGSISKPPVTIPPAVSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLLLDAGGSDGLELNK-----HNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPHKVED-YGFDVDMILKMPLRLTGSKEGHTMYLYRRKNVKPGLPIARITEVDPFFARGVDLCRNGGNGTELTKHVEARFVENTSGGIRTRRSKR 1634
P R + T KRR FGR++ P+ + V +VY +V + TGS+GGN SSG IYGELT G MQK++N++KE TG +S FIDVGSG+GKPN HVAQDPG SYGLE+EE RW L + + +L A EL+ H FF GD+ AK+F+PF+HVYMF IGFPP E+A I+NRS + LI Y P + D Y FDV+++ + + GSKEGH Y+Y+RK+ + A DP F D + EL V A + G TR S+R
Sbjct: 121 PGREGDDTGAKRRLLFGREVS-----PIHVQDNVRKVYKIVRRLTGSLGGNASSGPIYGELTMGSMQKMINLMKEHTGLCAESRFIDVGSGIGKPNLHVAQDPGVCFSYGLEVEESRWLLGMTCLKGMLEAAVSESVKELSDDERIHHQCFFEKGDIRQAKSFNPFSHVYMFSIGFPPMLWIELAKIWNRSSSPFLICYHSPKDIIDTYEFDVELVTQKQTSMHGSKEGHMGYIYKRKSARSFHRAA----CDPLFKPAFDKVEK--SAEELNDEVGAEIDQMQGTGPATRSSRR 404
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Match: A0A1Z5J7B9_FISSO (DOT1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7B9_FISSO) HSP 1 Score: 214 bits (545), Expect = 1.230e-60 Identity = 123/289 (42.56%), Postives = 167/289 (57.79%), Query Frame = 3
Query: 801 KRRAFGRKLGSISKPPVTIPPAVSRVYGLVAKATGSVGGNGSSGAIYGELTAGCMQKVVNVLKEETGFDEKSSFIDVGSGLGKPNFHVAQDPGCEISYGLELEEVRWQLSVVNHRRLLLDAGGSDGLELNK--------HNLFFAHGDVLSAKTFDPFTHVYMFDIGFPPGTLREIAMIFNRSQARHLISYQFPHKVED-YGFDVDMILKMPLRLTGSKEGHTMYLYRRKNVKPGLPIARITEVDPFFARGVDLCRNGGNGTELTKHVEARFVENTSGGIRTRRSKRLQ 1640
K+ FGR + I+ I P V +VYG++ K TGS+GGNGS G IYGELT MQKVVN++K+ F+ S FIDVGSG+GKPN HV QDPG ++SYG+E+E+ RW L + + +L DA + ++++ H F GD+ SA +F+PFTHVYMF IGFPP +A ++N S + +LI Y P + D Y FDV +I + P + GSKEGHT+YLYRR G IT DP F +L + +G K ++ R R KR +
Sbjct: 81 KKLIFGRLVDEIN-----IQPNVRKVYGIIRKLTGSIGGNGSHGPIYGELTMSSMQKVVNLMKQHMNFNSNSKFIDVGSGIGKPNLHVCQDPGVKLSYGIEIEQARWILGMTCLKGVL-DAAVKEEKDIDEAYDDEIILHRCVFECGDIRSANSFNPFTHVYMFSIGFPPSLWIHLAAMWNSSDSPYLICYHGPKDIIDSYEFDVVLIAQAPTSMHGSKEGHTVYLYRR-TTHTG---EEITSCDPLFK---NLDKRVDSGLHALKDDITEQLQQCVDSGRATRGKRFK 356 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig79.19159.1 >prot_F-serratus_M_contig79.19159.1 ID=prot_F-serratus_M_contig79.19159.1|Name=mRNA_F-serratus_M_contig79.19159.1|organism=Fucus serratus male|type=polypeptide|length=491bp MKRPDTSSAVDRTPEPTVGDKKNEVALLPPPPTVDETPSSPAPSRSKSITback to top mRNA from alignment at F-serratus_M_contig79:254799..264744- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig79.19159.1 ID=mRNA_F-serratus_M_contig79.19159.1|Name=mRNA_F-serratus_M_contig79.19159.1|organism=Fucus serratus male|type=mRNA|length=9946bp|location=Sequence derived from alignment at F-serratus_M_contig79:254799..264744- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig79:254799..264744- >mRNA_F-serratus_M_contig79.19159.1 ID=mRNA_F-serratus_M_contig79.19159.1|Name=mRNA_F-serratus_M_contig79.19159.1|organism=Fucus serratus male|type=CDS|length=2946bp|location=Sequence derived from alignment at F-serratus_M_contig79:254799..264744- (Fucus serratus male)back to top |