prot_F-serratus_M_contig79.19158.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig79.19158.1
Unique Nameprot_F-serratus_M_contig79.19158.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length259
Homology
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: A0A4D9CXW3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXW3_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.660e-19
Identity = 53/134 (39.55%), Postives = 75/134 (55.97%), Query Frame = 0
Query:  120 ARAKPFIGYCHSCRKALPRCYVCMQHIDALNPDMEVGRQ-HQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSRDKWIARCNTCWHVGHAHHFSYWFET-HDTCGVNGCRCKCMSLDSPI 251
            +R KP +  C  CRK LPRC++C+  + ALNP +E+ RQ HQQ +QQ    +GGG P   +      ++G   +  +++     G    +W + C  C H GHAHH   WFE   + CGV GCRC+CM  D+ I
Sbjct:  157 SRQKPLLSCCPECRKPLPRCFLCLLPMGALNPYLELRRQIHQQQRQQQ---RGGGLPRPEA------HQGADEEAALTK---LSGVRFGEWWSWCQACGHGGHAHHVRGWFEGGREVCGVTGCRCRCMQRDTAI 278          
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: A0A7S3TXM9_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TXM9_EMIHU)

HSP 1 Score: 76.3 bits (186), Expect = 1.400e-13
Identity = 54/178 (30.34%), Postives = 76/178 (42.70%), Query Frame = 0
Query:   80 RCNFCGKTVGVRDTAGGGDXXXXXXRPKRSSRNQGGGVG----RARAKPFIGYCHSCRKALPRCYVCMQHIDALNP-DMEVGRQHQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSRDKWIARCNTCWHVGHAHHFSYWFETHDTCGVNGCRCKCMSLDSPIV 252
            RC FC  ++    T GG        +  R++  +GGG+      AR       C +C+KALPRC +C+ H+   NP D+            P  G     PA +            ADG       AP +   +W+  C +C H GHA H   WF  H  C V GC C+C  LD+ ++
Sbjct:    7 RCAFCNASL---QTGGG--------QAARAAPKRGGGIAPGPAAARLAARASACPACKKALPRCALCLGHLGCPNPADL------------PEAGSAAPLPAAAED----------ADG------TAPSSGLGRWMVWCQSCRHGGHALHVEQWFARHTVCPVAGCDCQCALLDAGML 145          
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: I2CQM1_NANGC (Wd repeat-containing protein mio-b (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQM1_NANGC)

HSP 1 Score: 74.7 bits (182), Expect = 3.140e-13
Identity = 53/161 (32.92%), Postives = 77/161 (47.83%), Query Frame = 0
Query:   79 LRCNFCGKTVGVRDTAGGGDXXXXXXRPKRSSRNQGGGVGRARAKPFIGYCHSCRKALPRCYVCMQHIDALNPDMEVGRQ-HQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSRDKWIARCNTCWHVGHAHHFSYWFET-HDTCGV 237
            +RCNFC   + +              R +R  R   G    +R KP +  C  CRK LPRC++C+  + ALNP +E+ RQ HQQ +QQ    +GG  P   +      ++G   +  +++     G    +W + C  C H GHAHH   WFE   + CGV
Sbjct:    1 VRCNFCATGINL-------------SRLRRQGRT--GQSWLSRQKPLLSCCPECRKPLPRCFLCLLPMGALNPYLELRRQIHQQQRQQQ---RGGALPRPEA------HQGADEEAALTK---LSGVRFGEWWSWCQACGHGGHAHHVRGWFEGGREVCGV 134          
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: A0A7M7PAL7_STRPU (zinc_ribbon_16 domain-containing protein n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7PAL7_STRPU)

HSP 1 Score: 76.6 bits (187), Expect = 3.370e-12
Identity = 51/183 (27.87%), Postives = 76/183 (41.53%), Query Frame = 0
Query:   74 SRHLRLRCNFCGKTVGVRDTAGGGDXXXXXXRPKRSSRNQGGGVGRARAKPFIGYCHSCRKALPRCYVCMQHIDALNPDMEVGRQHQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSRDKWIARCNTCWHVGHAHHFSYWFETHDTCGVNGCRCKCMSLDS-PIVPPS 255
            S+ + + C+FC   +   + A GG                 GG  R   +     C+ CRKALPRC +C+ H+   + + ++  Q + ++   P  K   S                    + R+     T   +W + C +C H GHA H + WF TH  C V  C C+CM LDS   V PS
Sbjct:  754 SKQIYISCHFCQSPISPSELAKGGKAGYM------------GGYARGFQQRRSNTCYKCRKALPRCALCLMHMGTRSGESKLSPQQRSYK---PSSKQAASVQP-----------------MMRQ-----TDFGEWFSWCQSCRHGGHADHLTEWFRTHSECPVTSCMCRCMLLDSVAAVSPS 899          
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: A0A2T7PAB9_POMCA (zinc_ribbon_16 domain-containing protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PAB9_POMCA)

HSP 1 Score: 74.7 bits (182), Expect = 1.500e-11
Identity = 60/184 (32.61%), Postives = 76/184 (41.30%), Query Frame = 0
Query:   71 VPPSRHLRLRCNFCGKTVGVRDTAGGGDXXXXXXRP-KRSSRNQGGGVGRARAKPFIGYCHSCRKALPRCYVCMQHIDALNPDMEVGRQHQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSRDKWIARCNTCWHVGHAHHFSYWFETHDTCGVNGCRCKCMSLDSPIVP 253
            VPP   + + CNFCGK+V   +T G          P  R+ + Q       R K  I  C SCRKALPRC +C+  +   +    V  +H              SP                 GG  +      T    W + C TC H GHA H + WF  H  C V GC CKC+ +DSPI P
Sbjct:  733 VPPQ--VFISCNFCGKSV--TNTRGFRMPERNYLPPFSRAPQQQ-------RVK--ISCCPSCRKALPRCAICLCTLGTASA-FGVSGEH--------------SPLQ---------------GGQEKL-----TPFVDWFSWCQTCRHGGHAGHITAWFRDHTDCPVTGCSCKCLMIDSPIKP 868          
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: A0A3S1BNK4_ELYCH (zinc_ribbon_16 domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BNK4_ELYCH)

HSP 1 Score: 74.3 bits (181), Expect = 2.020e-11
Identity = 51/183 (27.87%), Postives = 67/183 (36.61%), Query Frame = 0
Query:   77 LRLRCNFCGKTVG----------VRDTAGGGDXXXXXXRPKRSSRNQGGGVGRARAKPFIGYCHSCRKALPRCYVCMQHIDALNPDMEVGRQHQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSRDKWIARCNTCWHVGHAHHFSYWFETHDTCGVNGCRCKCMSLDS 249
            + + CNFC   +           +  ++GG        RPK               KP I  C SCRKALPRC +C+ H+  L+                    G G+    S        GV+             T    W   C TC H GHA H + WF  H  C V GC CKC++ D+
Sbjct:  729 VHISCNFCSNQISNTQSLMNKDRMMISSGGNQYRGPQSRPKMPHN-----------KPKISCCQSCRKALPRCAICLAHMGTLS--------------------GLGADTSGS--------GVKL------------TEFGAWFTWCQTCRHGGHADHLTQWFSEHSDCPVTGCSCKCIAQDA 860          
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: A0A6U3VPN8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3VPN8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.170e-11
Identity = 41/125 (32.80%), Postives = 58/125 (46.40%), Query Frame = 0
Query:  123 KPFIGYCHSCRKALPRCYVCMQHIDALNPDMEVGRQHQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSRDKWIARCNTCWHVGHAHHFSYWFETHDTCGVNGCRCKCMSL 247
            K  +  C SCR+ LP+CY+C+  + ALNP +E+ R HQ+       G+    P    S+                       + ++W   C  C H GHA H + WFE+H  CGV+ C C C SL
Sbjct:  391 KAVLSCCPSCRQTLPKCYICLMPLRALNPYVELKR-HQK-----VTGQTDFPPTKDMSS----------------------LALNEWFTWCQRCKHGGHASHIAAWFESHTHCGVSNCNCACNSL 487          
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: A0A2P2IE19_9CRUS (Nuclear pore complex protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IE19_9CRUS)

HSP 1 Score: 72.8 bits (177), Expect = 4.520e-11
Identity = 53/184 (28.80%), Postives = 79/184 (42.93%), Query Frame = 0
Query:   71 VPPS--RHLRLRCNFCGKTVGVRDTAGGGDXXXXXXRPKRSSRNQGGGVGRARAKPFIGYCHSCRKALPRCYVCMQHID--ALNPDMEVGRQHQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSR-DKWIARCNTCWHVGHAHHFSYWFETHDTCGVNGCRCKCMSLDS 249
             PPS  +H+ L C++C K++     +           PK               K  +  C  CRK LPRC +C+QH+   +L+PDM   + H    ++  + +   +P +      GH +    DG        PG +    W   C TC H GHA H   WF  H  C V GC+C+C+  D+
Sbjct:  224 TPPSPPQHVLLACSYCMKSIAASPLS----LPPHHSPPKNQLGRMPQHSHHQHNKSKVMSCPHCRKPLPRCALCLQHLGTPSLSPDMHQ-KLHSHKAEKHSIDESSRAPHHLFIP--GHTQARLRDG-------LPGLNPFSNWFTWCQTCRHGGHASHILQWFCEHSECPVTGCKCQCLLQDN 393          
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: A0A6A7G005_9CRUS (Nuclear pore complex protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G005_9CRUS)

HSP 1 Score: 72.8 bits (177), Expect = 6.190e-11
Identity = 53/184 (28.80%), Postives = 79/184 (42.93%), Query Frame = 0
Query:   71 VPPS--RHLRLRCNFCGKTVGVRDTAGGGDXXXXXXRPKRSSRNQGGGVGRARAKPFIGYCHSCRKALPRCYVCMQHID--ALNPDMEVGRQHQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSR-DKWIARCNTCWHVGHAHHFSYWFETHDTCGVNGCRCKCMSLDS 249
             PPS  +H+ L C++C K++     +           PK               K  +  C  CRK LPRC +C+QH+   +L+PDM   + H    ++  + +   +P +      GH +    DG        PG +    W   C TC H GHA H   WF  H  C V GC+C+C+  D+
Sbjct:  490 TPPSPPQHVLLACSYCMKSIAASPLS----LPPHHSPPKNQLGRMPQHSHHQHNKSKVMSCPHCRKPLPRCALCLQHLGTPSLSPDMHQ-KLHSHKAEKHSIDESSRAPHHLFIP--GHTQARLRDG-------LPGLNPFSNWFTWCQTCRHGGHASHILQWFCEHSECPVTGCKCQCLLQDN 659          
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Match: R1EQ03_EMIHU (zinc_ribbon_16 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EQ03_EMIHU)

HSP 1 Score: 71.6 bits (174), Expect = 1.720e-10
Identity = 53/180 (29.44%), Postives = 74/180 (41.11%), Query Frame = 0
Query:   73 PSRHLRLRCNFCGKTVGVRDTAGGGDXXXXXXRPKRSSRNQGGGVG----RARAKPFIGYCHSCRKALPRCYVCMQHIDALNP-DMEVGRQHQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNHAPGTSRDKWIARCNTCWHVGHAHHFSYWFETHDTCGVNGCRCKCMSL 247
            P+  +  RC FC  ++    T GG        +  R++  +GGG+      AR       C +C+KALPRC +C+ H+   NP D+            P  G     PA +            ADG       AP +   +W+  C +C H GHA H   WF  H  C V GC C+   L
Sbjct:  843 PASQVFARCAFCNASL---QTGGG--------QAARAAPKRGGGIAPGPAAARLAARASACPACKKALPRCALCLGHLGCPNPADL------------PEAGSAAPLPAAAED----------ADG------TAPSSGLGRWMVWCQSCRHGGHALHVEQWFARHTVCPVAGCDCQSTHL 983          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A4D9CXW3_9STRA1.660e-1939.55Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3TXM9_EMIHU1.400e-1330.34Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
I2CQM1_NANGC3.140e-1332.92Wd repeat-containing protein mio-b (Fragment) n=1 ... [more]
A0A7M7PAL7_STRPU3.370e-1227.87zinc_ribbon_16 domain-containing protein n=3 Tax=E... [more]
A0A2T7PAB9_POMCA1.500e-1132.61zinc_ribbon_16 domain-containing protein n=2 Tax=P... [more]
A0A3S1BNK4_ELYCH2.020e-1127.87zinc_ribbon_16 domain-containing protein n=1 Tax=E... [more]
A0A6U3VPN8_9STRA2.170e-1132.80Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2P2IE19_9CRUS4.520e-1128.80Nuclear pore complex protein (Fragment) n=1 Tax=Hi... [more]
A0A6A7G005_9CRUS6.190e-1128.80Nuclear pore complex protein (Fragment) n=1 Tax=Hi... [more]
R1EQ03_EMIHU1.720e-1029.44zinc_ribbon_16 domain-containing protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031488WD repeat protein mio, zinc-ribbon like domainPFAMPF17034zinc_ribbon_16coord: 206..245
e-value: 4.9E-9
score: 36.5
IPR037593MIOS/Sea4PANTHERPTHR16453WD40 DOMAIN-CONTAINING PROTEIN MIO FAMILY MEMBERcoord: 71..250
NoneNo IPR availablePANTHERPTHR16453:SF9GATOR COMPLEX PROTEIN MIOScoord: 71..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig79contigF-serratus_M_contig79:240547..248998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig79.19158.1mRNA_F-serratus_M_contig79.19158.1Fucus serratus malemRNAF-serratus_M_contig79 240547..249136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig79.19158.1 ID=prot_F-serratus_M_contig79.19158.1|Name=mRNA_F-serratus_M_contig79.19158.1|organism=Fucus serratus male|type=polypeptide|length=259bp
RLSSPRPGVGLFAQDASPPGRPLGGNPRAEQGEGVRLVESSVDREPWPDN
GGVRAGLTDGGRTYDGFGGGVPPSRHLRLRCNFCGKTVGVRDTAGGGDQA
GAGDRPKRSSRNQGGGVGRARAKPFIGYCHSCRKALPRCYVCMQHIDALN
PDMEVGRQHQQHQQQPPLGKGGGSPAYSSSNSRGHNRGVRADGGVSRRNH
APGTSRDKWIARCNTCWHVGHAHHFSYWFETHDTCGVNGCRCKCMSLDSP
IVPPSISK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031488Zn_ribbon_mio
IPR037593MIOS/Sea4