mRNA_F-serratus_M_contig786.19121.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: D8LFT7_ECTSI (Plastid phosphoglycerate mutase protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT7_ECTSI) HSP 1 Score: 434 bits (1116), Expect = 9.140e-142 Identity = 220/318 (69.18%), Postives = 256/318 (80.50%), Query Frame = 3
Query: 123 APGGFVLTMTAARKGIAQAFSFGGLRGVISRQRPAIGKRLFGAAAEPSNT------------TPPESPLPPPGDD-DLVSFYLLRHGQTNFNAIGRIQGTLDSSVLTEQGISQAVEAGKILASAVDLELGPTVVVSPMTRARQTLECVREELQHAE--RDFDAVEIVRDIREIELFEWEGELKEDIIRNSPDEYATWVEDPSNFNFSGRYPAKDLWARAGKAWDEIRSLQSIQGQRSTLLVAHNAINQALVFTAFGCDTTYFRKLAWPNCAVLELQWRRGAERAERYRWVIPEPSSFVEAADAARILKTSADDNRFTL 1031
APGGF++ + ARK +AF FGG ++GKRLF + A S+ TPPESP PP GDD +L SF+LLRHGQTNFNAIGRIQGTLDSS+LTE+GISQA+EAGK LAS DL+LGPTVVVSPM RA+QTLECVR+EL+ +E +DF+ VEIV DIREIELFEW+G+LKEDII+N+P++YA+WV DPSNFNFSGRYPA+DLW RA AWD+IRSLQSIQ Q TL+VAHNAINQAL++TA GCDTTYFRKL+WPNCAVLELQWRRG RAERYRWV+PE S FVEAADAAR+LK DDNR+TL
Sbjct: 10 APGGFLIALATARKSFTRAFCFGG------GSSSSVGKRLFRSTAAESSAKAGTGPRGLATATPPESPFPPAGDDGELESFFLLRHGQTNFNAIGRIQGTLDSSILTEEGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSEISKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWKRASNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEASGFVEAADAARLLKDGEDDNRYTL 321
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: Q00GN2_KARBR (Plastid phosphoglycerate mutase protein (Fragment) n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GN2_KARBR) HSP 1 Score: 173 bits (438), Expect = 4.210e-44 Identity = 105/240 (43.75%), Postives = 141/240 (58.75%), Query Frame = 3
Query: 324 FYLLRHGQTNFNAIGRIQGTLDSSVLTEQGISQAVEAGKILASAVDLELGPTVVVSPMTRARQTLECVREELQHAERDFDAVEIVRDIREIELFEWEGELKEDIIRNSPDEYATWVEDPSNFNFSGRYPAKDLWARAGKAWDEIRSLQSIQGQRS----TLLVAHNAINQALVFTAFGCDTTYFRKLAWPNCAVLELQWRRGAERAERYRWVIP--EPSSFVEAADAARILKTSADDNRF 1025
+ +LRHG+TNFNA G +QG+ D S LTE+G +QA +AG LA+ DL + V VSP+TRA TLE V + L + + ++REI+L+ WEG+ KED+ R PD Y W +F G YP +LW RA +AW IR+ S G+R TL+V HN I QAL F+A G D +YFR+L++PN LE W G A R+RW +P E SS +A AA + A D R+
Sbjct: 99 YLILRHGETNFNAKGILQGSSDISRLTEKGQAQANKAGMELATLSDLPI-EQVFVSPLTRATSTLELVAQSLPCS---LPEAITLPELREIDLYSWEGKQKEDLKREMPDTYQAWKSADPDFVVDGHYPLVELWQRAKEAWAAIRA--SEDGKRDIDGVTLIVCHNGIGQALFFSAIGLDASYFRQLSFPNAGALECDWPLGELHASRWRWRLPLDEASSEWRSATAASL---DASDGRY 329
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: A0A7S0F1H7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1H7_9CRYP) HSP 1 Score: 174 bits (440), Expect = 8.850e-44 Identity = 99/218 (45.41%), Postives = 138/218 (63.30%), Query Frame = 3
Query: 324 FYLLRHGQTNFNAIGRIQGTLDSSVLTEQGISQAVEAGKILASAVDLELGPTVVVSPMTRARQTLECVREELQHAERDFDAVEIVRD-IREIELFEWEGELKEDIIRNSPDEYATWV-EDPSNFNF-SGRYPAKDLWARAGKAWDEIRSLQSIQGQRSTLLVAHNAINQALVFTAFGCDTTYFRKLAWPNCAVLELQWRRGAERAERYRWVIPEPSSF 968
F +LRHG+TN+NA GRIQG+ D S LTE+G +QA G IL S + ++ +V VSP+TRAR+TLE L R+ IV D +RE++L+EWEG LK++I PD Y+ W E+P F SG+YP +DLW RA WD +R + ++TL+VAHN INQAL+ T G +FRKL +PNC + E+ G +A+++RW+ P PS +
Sbjct: 158 FLILRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGGIL-SEIHID---SVFVSPLTRARRTLELAEAGLG---RNLSGSAIVLDDLREVDLYEWEGMLKKEIKEMYPDIYSLWRGENPRQFKLDSGKYPIRDLWKRASNVWDVLR--RDATNGKTTLIVAHNGINQALLCTTLGLSEEFFRKLEFPNCGIAEVIIPHGQSKAKQWRWLYPTPSEW 366
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: A0A7S4I552_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I552_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.520e-42 Identity = 92/242 (38.02%), Postives = 136/242 (56.20%), Query Frame = 3
Query: 297 PPGDDDLVSFYLLRHGQTNFNAIGRIQGTLDSSVLTEQGISQAVEAGKILASAVDLEL---GPT--VVVSPMTRARQTLECVREELQHAERDFDAVEIVRDIREIELFEWEGELKEDIIRNSPDEYATW-VEDPSNFNFSGRYPAKDLWARAGKAWDEIRSLQSIQGQR-------STLLVAHNAINQALVFTAFGCDTTYFRKLAWPNCAVLELQWRRGAERAERYRWVIPEPSSFVEAAD 983
PP L +++LRHG+T+ NA GRIQG+ D S LTE+G SQA G ++ D E GP V SP+TRA++TL+ +RE + + ++ ++REI+L++WEG +I N P+ YA W + D SG P ++WARAG+ W+ IRS ++ G+ STLLV H + Q L+ +A G D T+FR+ +PNC + E+ W E A +RW P S ++ D
Sbjct: 33 PPSSASLHRYFILRHGETDANASGRIQGSADFSRLTERGQSQAARVGSVVFGGSDGEGSIDGPIRHVYASPLTRAQETLQIIREHADPSLIPGEGEIVLDELREIDLYDWEGRHTSEIEENDPEAYAAWTMGDAHGMEVSGCKPIVEMWARAGRVWEIIRSANAVAGRTDSDENPSSTLLVCHGTLGQGLLSSALGLDETHFRRHDFPNCGMAEIVWYHDEEIARNWRWHHPSRSELMQPFD 274
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: L1ISC6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ISC6_GUITC) HSP 1 Score: 157 bits (398), Expect = 3.220e-40 Identity = 90/196 (45.92%), Postives = 124/196 (63.27%), Query Frame = 3
Query: 324 FYLLRHGQTNFNAIGRIQGTLDSSVLTEQGISQAVEAGKILASAVDLELGPTVVVSPMTRARQTLECVREELQHAERDFDAVEIVRDIREIELFEWEGELKEDIIRNS-PDEYATWV-EDPSNFNF-SGRYPAKDLWARAGKAWDEIRSLQSIQGQRSTLLVAHNAINQALVFTAFGCDTTYFRKLAWPNCAVLEL 902
F LRHG+TN+NA GRIQG+ D S LTE+G +QA G+IL+ D+ + +V VSP+TRAR TLE D+ ++ D+RE++L EWEG LK+ I+ PD Y+ W E+P F SG+YP +DLW RAGK W+ +R + +++L+VAHN INQAL+ T G YFRKL +PNC + E+
Sbjct: 17 FLFLRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGRILS---DIPID-SVFVSPLTRARMTLELAA--AGSGRNLSDSAMVLDDLREVDLHEWEGMLKKQEIKEMYPDIYSLWRGENPREFKLDSGKYPIRDLWKRAGKVWEVLR--RDAANGKTSLIVAHNGINQALLCTTLGLSEEYFRKLEFPNCGIAEV 204
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: A0A7S4C0X0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0X0_CHRCT) HSP 1 Score: 159 bits (403), Expect = 5.630e-40 Identity = 103/264 (39.02%), Postives = 134/264 (50.76%), Query Frame = 3
Query: 222 PAIGKRLFGAAAEPSNTTPPESPLPPPGDDDLVSFYLLRHGQTNFNAIGRIQGTLDSSVLTEQGISQAVEAGKILASAVDLELGPTVVVSPMTRARQTLECVREELQHAERDFDAVEIVRDIREIELFEWEGELKEDIIRNSPDEYATWVEDPSNFNFSGRYPAKDLWARAGKAWDEIRSLQSIQGQRSTLLVA-HNAINQALVFTAFGCDTTYFRKLAWPNCAVLELQWRRGAER--------------AERYRWVIPEPSSF 968
P + L A + PP S P G F +LRHG+TN NA G IQG+ D SVLT++G QA AG+ LA V VSP++RAR TLE R+ + ++ D+RE++L++WEG K D+ R PDEY W P F+ SG+ P DLWARA W EI S T+LV H+ I QAL+ TA G D FR+ A PNC +EL+W G A R+RW+IP S +
Sbjct: 5 PTLLLSLLLGRASSAALQPPTSAAPGAG----CKFVILRHGETNHNADGIIQGSSDVSVLTDKGKEQARRAGEQLAELYQEGSISKVFVSPLSRARDTLELCRKTAPLPTGEI----VLADLREVDLWDWEGRNKADLRRERPDEYEAWKGQPLLFSVSGKKPIVDLWARARNVWREIHSQVPEDPSSGTILVVCHSGIGQALLSTALGEDERSFRRRALPNCGAVELEWIDGYVASTDGGVASMDSDCLANRWRWLIPNTSEW 260
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: A0A7S2AAY9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAY9_TRICV) HSP 1 Score: 145 bits (365), Expect = 1.870e-34 Identity = 105/307 (34.20%), Postives = 144/307 (46.91%), Query Frame = 3
Query: 201 GVISRQRPAIGKR---LFGAAAEPSNTTPPESPLPPPGDDDLVSFYLLRHGQTNFNAIGRIQGTLDSSVLTEQGISQAVEAGKILASAVDLELGPTVV----VSPMTRARQTLECVRE-----ELQHAERDFDAVEIVRDIREIELFEWEGELKEDIIRNSPDEYATW-VEDPSNFNFSGRYPAKDLWARAGKAWDEIRS--------------------LQSIQGQR--------------------STLLVAHNAINQALVFTAFGCDTTYFRKLAWPNCAVLELQWRRGAERAERYRWVIPEPS 962
G++ P+IG+ F A + T+ SP PP +Y+LRHG+T+ NA GRIQG+ D+S LTE+G +QA E S V TV VSP+TRAR+TL VRE L AER ++ D+REI+ + WEG K D++ PD Y W V D N GR P ++W RA W+ +R+ +++ G STLLV H + QAL+ AFG D T+FR +PNC + E+ W + A +RW P PS
Sbjct: 27 GLVLLAAPSIGRAGRPSFARALATAATSRSPSPSPP------HRYYILRHGETDANASGRIQGSSDASRLTERGRAQAAEVAAAAFSGVVGGAVGTVFSAAYVSPLTRARETLSVVRELAGPGVLPPAER------VLTDLREIDFYGWEGRDKADLMAEFPDSYRAWKVGDSRNVVVEGRLPVVEVWERAASVWEVVRADAAAAAXXXXXXXXXSAENHPRAVDGSPGADGDGXXXXTXXXXXDTTPSTLLVCHGTLGQALLCAAFGRDETHFRLYEFPNCGLAEIVWHGDEKLARSWRWHHPTPS 321
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: A0A8J2X569_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X569_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.010e-31 Identity = 94/227 (41.41%), Postives = 125/227 (55.07%), Query Frame = 3
Query: 324 FYLLRHGQTNFNAIGRIQGTLDSSVLTEQGISQAVEAGKILASAVDLELG--PTVVVSPMTRARQTLECVREELQHAERDFDAVEIVRD-IREIELFEWEGELKEDIIRNSPDEYATWVEDPSNFNFS-GRYPAKDLWARAGKAWDEIRSLQSIQGQRSTLLVAHNAINQALVFTAFGCDTTYFR--KLAWPNCAVLELQWRRGAERAERYRWVIPEPSSFVEAADA 986
F + RHG+TNFNA GRIQGTLD+SVLT +G+ QA E G +A D EL V VSPMTRARQTL C+ E A +VRD +REIEL WEG+LK +++ +A W DP+ F G P DLWARA W +R +L+V+H A+ + +V A G FR K + NC ++E+ W GA A +R + +++ A DA
Sbjct: 23 FLIARHGETNFNAEGRIQGTLDTSVLTARGVRQAEELGCYIA---DEELARISKVWVSPMTRARQTLACIEE----ACGTLLPEPVVRDDLREIELHTWEGKLKSEVMDTG---WARWKADPAAFVMDDGARPLPDLWARAVGNWAALRR----DAPPCSLVVSHGALGRCMVAAALGGAMDTFRDPKFQFDNCELVEVAWAPGAPAAACWRRLHRARTAWEAAEDA 235
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: A0A812MB86_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812MB86_9DINO) HSP 1 Score: 134 bits (338), Expect = 1.120e-31 Identity = 91/233 (39.06%), Postives = 128/233 (54.94%), Query Frame = 3
Query: 324 FYLLRHGQTNFNAIGRIQGTLDS-SVLTEQGISQAVEAGKILASAVDLELGPTVVVSPMTRARQTLECVR----EELQHAERDFDAVEIVRDIREIELFEWEGELKEDIIRNSPDEYATWVEDPSNFNFSGRYPAKDLWARAGKAWDEIRSLQSIQGQRSTLLVAHNAINQALVFTAFGCDTTYFRKLAWPNCAVLELQWRRGAERAERYRWVIPEPSSFVEAADAARILKTS 1007
F L+RHGQT FNA R QG++D SVLT +GISQA E G+ L V VSP+ RARQTLE R E L E ++REI+L+EW+G +++I P+ W E+ N SGRY +DLW R+ +AW +R + G+ +L+VAH AI +AL+ TA G FR LA N V+E+ W G+E ++R + P+ + AD + +K +
Sbjct: 22 FLLVRHGQTTFNAEKRFQGSMDEGSVLTAKGISQAEELGQWLKG----NPVAAVFVSPLLRARQTLEVARTVAGEVLPPTETKLS------ELREIDLYEWQGRTQDEIRAEDPELMRLWKEETWNLQVSGRYVVRDLWRRSIEAWHRMRQVAP-SGEERSLVVAHGAIIKALISTALGLPEQGFRHLAMSNGEVVEVAWS-GSEA--KWRKLHPDKGPWRCLADEEQAMKAN 240
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Match: Q014L4_OSTTA (Histidine phosphatase superfamily, clade-1 n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q014L4_OSTTA) HSP 1 Score: 135 bits (339), Expect = 3.130e-30 Identity = 81/215 (37.67%), Postives = 117/215 (54.42%), Query Frame = 3
Query: 249 AAAEPSNTTPPESPLPPPGDDDLVSFYLLRHGQTNFNAIGRIQGTLDSSVLTEQGISQAVEAGKILASAVDLELGPTVVVSPMTRARQTLECVREELQHAERDFDAVEIVRDIREIELFEWEGELKEDIIRNSPDEYATWVEDPSNFNFSGRYPAKDLWARAGKAWDEIRSLQSIQGQRSTLLVAHNAINQALVFTAFGCDTTYFRKLAWPNCAV 893
A+ +++T ES P +RHGQ+ +NA+GRIQG+ + S LT++G SQA I+A E + SP+ RARQT + V RD A+ RD+REI+++ +EG K++ D Y TW + P G +P ++LW RA W+ RSL G++ L+VAHNA+NQAL+ +A G YFR+L NCAV
Sbjct: 27 ASVRAASSTSAESSRPQSHSSTRREITFVRHGQSTWNAVGRIQGSSNFSFLTDKGESQAEITRGIVAE----EEYDACLASPLRRARQTADVV-----WGRRDASAIREDRDLREIDMYAFEGLFKDEGKAKFGDAYDTWKKSPHELVIEGHHPVRELWDRATSVWE--RSLSGSGGEQKILVVAHNAMNQALIGSALGLGPNYFRRLLQSNCAV 230 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig786.19121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig786.19121.1 >prot_F-serratus_M_contig786.19121.1 ID=prot_F-serratus_M_contig786.19121.1|Name=mRNA_F-serratus_M_contig786.19121.1|organism=Fucus serratus male|type=polypeptide|length=314bp MKPRGCRSLFAPGGFVLTMTAARKGIAQAFSFGGLRGVISRQRPAIGKRLback to top mRNA from alignment at F-serratus_M_contig786:125754..134862+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig786.19121.1 ID=mRNA_F-serratus_M_contig786.19121.1|Name=mRNA_F-serratus_M_contig786.19121.1|organism=Fucus serratus male|type=mRNA|length=9109bp|location=Sequence derived from alignment at F-serratus_M_contig786:125754..134862+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig786:125754..134862+ >mRNA_F-serratus_M_contig786.19121.1 ID=mRNA_F-serratus_M_contig786.19121.1|Name=mRNA_F-serratus_M_contig786.19121.1|organism=Fucus serratus male|type=CDS|length=1884bp|location=Sequence derived from alignment at F-serratus_M_contig786:125754..134862+ (Fucus serratus male)back to top |