prot_F-serratus_M_contig7851.19113.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig7851.19113.1
Unique Name	prot_F-serratus_M_contig7851.19113.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	82

Homology

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BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: A0A088CIH6_9CHLO (Photosystem I iron-sulfur center n=2 Tax=Chlorophyta TaxID=3041 RepID=A0A088CIH6_9CHLO)

HSP 1 Score: 127 bits (320), Expect = 7.040e-37
Identity = 77/81 (95.06%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLAAETTRSMGLAY 81
            MSH+V IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXX SVRVYL AETTRSMGLAY
Sbjct:    6 MSHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXXSVRVYLGAETTRSMGLAY 86

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BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: K9XT12_STAC7 (Photosystem I iron-sulfur center n=41 Tax=root TaxID=1 RepID=K9XT12_STAC7)

HSP 1 Score: 127 bits (319), Expect = 8.660e-37
Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLAAETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIAS+PRTEDXXXXXXXXXXXXXXXLS+RVYL  ETTRSMGLAY
Sbjct:    1 MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDXXXXXXXXXXXXXXXLSIRVYLGPETTRSMGLAY 81

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BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: A0A6I5NDM4_9CYAN (Photosystem I iron-sulfur center n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=A0A6I5NDM4_9CYAN)

HSP 1 Score: 126 bits (317), Expect = 3.990e-36
Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLAAETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIA++PRTEDXXXXXXXXXXXXXXXLS+RVYL  ETTRSMGLAY
Sbjct:   29 MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIAASPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 109

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BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: PSAC_SYNP2 (Photosystem I iron-sulfur center n=424 Tax=root TaxID=1 RepID=PSAC_SYNP2)

HSP 1 Score: 125 bits (313), Expect = 7.120e-36
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLAAETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACP DVLEMVPWDGCKAGQIAS+PRTEDXXXXXXXXXXXXXXX S+RVYL AETTRSMGLAY
Sbjct:    1 MSHSVKIYDTCIGCTQCVRACPLDVLEMVPWDGCKAGQIASSPRTEDXXXXXXXXXXXXXXXXSIRVYLGAETTRSMGLAY 81

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BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: PSAC_THEVB (Photosystem I iron-sulfur center n=199 Tax=cellular organisms TaxID=131567 RepID=PSAC_THEVB)

HSP 1 Score: 125 bits (313), Expect = 7.120e-36
Identity = 74/81 (91.36%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLAAETTRSMGLAY 81
            M+H+V IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIAS+PRTEDXXXXXXXXXXXXXXX S+RVYL AETTRSMGLAY
Sbjct:    1 MAHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDXXXXXXXXXXXXXXXXSIRVYLGAETTRSMGLAY 81

[Close]

BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: A0A097KM99_9CHLO (Photosystem I iron-sulfur center n=6 Tax=Chlorophyta TaxID=3041 RepID=A0A097KM99_9CHLO)

HSP 1 Score: 125 bits (314), Expect = 9.570e-36
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLAAETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACPTDVLEMVPWDGCKA QIASAPRTEDXXXXXXXXXXXXXXX SVRVYL +ETTRSMGLAY
Sbjct:   23 MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKANQIASAPRTEDXXXXXXXXXXXXXXXXSVRVYLGSETTRSMGLAY 103

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BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: M1X443_9NOST (Photosystem I iron-sulfur center n=9 Tax=cellular organisms TaxID=131567 RepID=M1X443_9NOST)

HSP 1 Score: 124 bits (311), Expect = 1.440e-35
Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLAAETTRSMGLAY 81
            MSH+V IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQ+A++PRTEDXXXXXXXXXXXXXXX S+RVYL AETTRSMGLAY
Sbjct:    1 MSHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQLAASPRTEDXXXXXXXXXXXXXXXXSIRVYLGAETTRSMGLAY 81

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BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: PSAC_ARATH (Photosystem I iron-sulfur center n=5680 Tax=cellular organisms TaxID=131567 RepID=PSAC_ARATH)

HSP 1 Score: 124 bits (310), Expect = 2.040e-35
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLAAETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACPTDVLEM+PWDGCKA QIASAPRTEDXXXXXXXXXXXXXXXLSVRVYL  ETTRSMGLAY
Sbjct:    1 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLWHETTRSMGLAY 81

[Close]

BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: K9XI28_9CHRO (Photosystem I iron-sulfur center n=24 Tax=Bacteria TaxID=2 RepID=K9XI28_9CHRO)

HSP 1 Score: 124 bits (310), Expect = 2.100e-35
Identity = 76/82 (92.68%), Postives = 80/82 (97.56%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLA-AETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIA++PRTEDXXXXXXXXXXXXXXXLS+RVYL+ AETTRSMGLAY
Sbjct:    1 MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIAASPRTEDXXXXXXXXXXXXXXXLSIRVYLSNAETTRSMGLAY 82

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BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Match: PSAC_HELAN (Photosystem I iron-sulfur center n=529 Tax=Pentapetalae TaxID=1437201 RepID=PSAC_HELAN)

HSP 1 Score: 123 bits (308), Expect = 4.120e-35
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLAAETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACPTDVLEM+PWDGCKA QIASAPRTEDXXXXXXXXXXXXXXXLSVRVYL  ETTRSMG+AY
Sbjct:    1 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLWHETTRSMGIAY 81

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig7851.19113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A088CIH6_9CHLO	7.040e-37	95.06	Photosystem I iron-sulfur center n=2 Tax=Chlorophy...	[more]
K9XT12_STAC7	8.660e-37	93.83	Photosystem I iron-sulfur center n=41 Tax=root Tax...	[more]
A0A6I5NDM4_9CYAN	3.990e-36	92.59	Photosystem I iron-sulfur center n=2 Tax=unclassif...	[more]
PSAC_SYNP2	7.120e-36	92.59	Photosystem I iron-sulfur center n=424 Tax=root Ta...	[more]
PSAC_THEVB	7.120e-36	91.36	Photosystem I iron-sulfur center n=199 Tax=cellula...	[more]
A0A097KM99_9CHLO	9.570e-36	93.83	Photosystem I iron-sulfur center n=6 Tax=Chlorophy...	[more]
M1X443_9NOST	1.440e-35	90.12	Photosystem I iron-sulfur center n=9 Tax=cellular ...	[more]
PSAC_ARATH	2.040e-35	93.83	Photosystem I iron-sulfur center n=5680 Tax=cellul...	[more]
K9XI28_9CHRO	2.100e-35	92.68	Photosystem I iron-sulfur center n=24 Tax=Bacteria...	[more]
PSAC_HELAN	4.120e-35	92.59	Photosystem I iron-sulfur center n=529 Tax=Pentape...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017491	Photosystem I protein PsaC	TIGRFAM	TIGR03048	TIGR03048	coord: 2..81 e-value: 7.6E-56 score: 184.3
IPR017491	Photosystem I protein PsaC	HAMAP	MF_01303	PSI_PsaC	coord: 1..81 score: 35.803
None	No IPR available	GENE3D	3.30.70.20		coord: 1..81 e-value: 1.8E-36 score: 125.5
None	No IPR available	PANTHER	PTHR24960:SF66		coord: 1..81
None	No IPR available	PANTHER	PTHR24960	FAMILY NOT NAMED	coord: 1..81
None	No IPR available	SUPERFAMILY	54862	4Fe-4S ferredoxins	coord: 7..61
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PFAM	PF12838	Fer4_7	coord: 10..61 e-value: 1.2E-9 score: 38.5
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 1..31 score: 10.407
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 39..68 score: 8.684
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 48..59

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig7851	contig	F-serratus_M_contig7851:6559..6804 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig7851.19113.1	mRNA_F-serratus_M_contig7851.19113.1	Fucus serratus male	mRNA	F-serratus_M_contig7851 6559..6804 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig7851.19113.1 ID=prot_F-serratus_M_contig7851.19113.1|Name=mRNA_F-serratus_M_contig7851.19113.1|organism=Fucus serratus male|type=polypeptide|length=82bp
MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDCVG
CKRCETACPTDFLSVRVYLAAETTRSMGLAY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017491	PSI_PsaC
IPR017896	4Fe4S_Fe-S-bd
IPR017900	4Fe4S_Fe_S_CS