prot_F-serratus_M_contig785.19110.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig785.19110.1
Unique Nameprot_F-serratus_M_contig785.19110.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length262
Homology
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 2.890e-118
Identity = 192/262 (73.28%), Postives = 208/262 (79.39%), Query Frame = 0
Query:    1 MRAVSSLVSFSALATSSAFVVPGVTISHAFRGRTGWAGALRYVSRAHRSSTSRV-LALRRPAPGAGGXXXXXXXXXXXXXXEHGVEAAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 261
            MRAVSSLVS SALATSSAFV PG     A  G+T  A ALR +SRA  +S+ R   ALRRP                    E    AAP GELTELARLEIR+GKI+EI+RHPDADSLYVEKVD+G GEEEGPRTIVSGLVNFC+ESDLLGRDVVVLCNLKPV+MKGV SAGMLLCSSNEDH+KVEPLCPP GVPLGELVTF+GH  SPV+AGNRAGKAWK+ASKTL VDD++ AKFTGE LPA FMTSKGPITSPLPG IS
Sbjct:    1 MRAVSSLVSLSALATSSAFVAPGGNAIRASTGKTNAAMALRCLSRARLTSSVRPQAALRRPTA----VRTMMMMSDAAVTEEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSEEAKFTGEKLPATFMTSKGPITSPLPGSIS 258          
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 249 bits (637), Expect = 6.760e-80
Identity = 127/176 (72.16%), Postives = 146/176 (82.95%), Query Frame = 0
Query:   86 AAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 261
            AAP G+LTELARLE+RVG+I+EI RHPDAD LYVEK+DIG  E  GPRTIVSGLV +C E+DLL RDVV+L NLKPV+M+GV SAGM+LCSSN DHT+V PL PP G PLGELVTFEGH ++PVEAGNRA KAWKK +KT+ V +  VA+FT E LPA F TSKG +TSPLPG IS
Sbjct:   71 AAPVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIG--EPAGPRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGEDGVARFTDEALPAAFATSKGVVTSPLPGNIS 244          
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.500e-64
Identity = 110/178 (61.80%), Postives = 137/178 (76.97%), Query Frame = 0
Query:   84 VEAAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 261
            V  AP+GELTEL+RLEIR GKILEISRHP+AD LYVEK+D+G  E +GPRTIVSGLV +  E +LLGR+VVVL NLKP ++KG+ S GMLLC+SNEDHT V+PL PP GV LGEL+TFEGH ++P   GNRAGKA+ + ++ L   +  +A + G     PFMTSKGP+T+ + G IS
Sbjct:  189 VVEAPKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLG--EADGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGAGEDMIATYKG----IPFMTSKGPVTTGMAGSIS 360          
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.310e-60
Identity = 114/177 (64.41%), Postives = 126/177 (71.19%), Query Frame = 0
Query:   86 AAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSP-LPGPIS 261
            A P G+  E   LEIRVGKILEI +HP+ADSLYVEKVD+G  E  GPRTIVSGLV FC    LL RDVVVLCNLKP + KG+ S GMLLCSSN+   KVEPL PPAGVP GELV+FEGH   P E GNRA KA+ K S    V D+ +A + G     PFMTSKGPITS  L GPIS
Sbjct:   67 AKPSGDSIEA--LEIRVGKILEIGKHPEADSLYVEKVDLG--ESSGPRTIVSGLVEFCTAEYLLNRDVVVLCNLKPRAFKGINSQGMLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDSGIATYKG----IPFMTSKGPITSTILKGPIS 235          
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 192 bits (489), Expect = 6.540e-58
Identity = 99/171 (57.89%), Postives = 125/171 (73.10%), Query Frame = 0
Query:   91 ELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 261
            ELTEL+RLEIRVGKI+E+ RHP+AD LYVEK+D+G  E  GPRTIVSGLV FC    LL  +V+VLCNLKP ++KG+ S GM+LC++++D TKV+PL PP   P+G+L+TFEGH S PVE GNRA KA+ K +    V++  VA + G     PF T  GP+TS L G IS
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLG--EPTGPRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNEQGVATYNG----IPFSTPNGPVTSTLIGKIS 215          
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 188 bits (478), Expect = 6.250e-56
Identity = 96/172 (55.81%), Postives = 128/172 (74.42%), Query Frame = 0
Query:   85 EAAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPL 256
            E AP GE+TEL+RLEIRVGKILE++ HP  + ++VEK+D+G   E+ PRTI SGL ++ +E DLL +D +VLCNLKP  + GV S GM+LC+S+ +HT V+ + PPAGV  GELVTF+GH ++PV+AGNRA KA+KK +   + DD+  A FTGE   + F TS GP TSP+
Sbjct:   66 EVAPVGEMTELSRLEIRVGKILEVAVHPTKEKIFVEKIDVG---EDEPRTICSGLRDYLKEDDLLNKDCIVLCNLKPRDLDGVPSNGMVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDSGAAVFTGEPASS-FQTSSGPCTSPI 233          
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 188 bits (477), Expect = 7.140e-56
Identity = 98/172 (56.98%), Postives = 123/172 (71.51%), Query Frame = 0
Query:   92 LTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSP--LPGPIS 261
            LTEL+RLEIRVGK++E  RHPDAD+LYVEKVD+G   E+ PRTIVSGLVNF  + +L GR V+VLCNLKP +M+G+ S GMLLC+SNEDHTKV+PL  P    +G L+TFEGH ++P++AGNRA KA+ K +     D   +A+F       PFMT  G   SP  L G +S
Sbjct:   68 LTELSRLEIRVGKVVECERHPDADTLYVEKVDVG---EDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTDADGIARFNA----TPFMTEAGACYSPAKLQGSVS 232          
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 188 bits (477), Expect = 1.520e-55
Identity = 100/172 (58.14%), Postives = 125/172 (72.67%), Query Frame = 0
Query:   92 LTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSP--LPGPIS 261
            LTEL+RLEIRVGKI++  +HP+ADSLYVE+VD+G  +E G R IVSGLV+F    +++ R V+VLCNLKP +M+G+ S GMLLC+SNEDH++V+PL  P GVP+G LVTFEGH S P  AGNRA KA+ K +K+L  D T VA F       PF T  GP  SP  L GP+S
Sbjct:   92 LTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVG--DESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTDATGVAMFEQ----VPFATPSGPCFSPKKLVGPVS 257          
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 2.050e-55
Identity = 99/170 (58.24%), Postives = 122/170 (71.76%), Query Frame = 0
Query:   85 EAAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITS 254
            ++AP   LTEL+RLEIRVGKI+E  +HPDAD+LYVEKVD+G   EE PRTIVSGLV +     ++GR VVVLCNLKP +M+GV S GMLLC+SNEDHT V+PLC P   P+GELVTFEGH S+P++  NRA KA+ + +  L  ++  VA F       PF TS GP  S
Sbjct:  108 DSAPDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVG---EEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEAGVAMFED----VPFSTSAGPCFS 270          
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.390e-54
Identity = 101/176 (57.39%), Postives = 123/176 (69.89%), Query Frame = 0
Query:   86 AAPRGELTELARLEIRVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVTFEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKGPITSPLPGPIS 261
            AAP GEL E +RLEIRVGKI+++S HPDAD LYVEK+D G   E+ PRTIVSGLV + +  DLL R VVVL NLKP +M+G+ S GMLLC+SNEDH++V PL PP     GEL+T EG  S P+E  NRA KA+ K +K L V+D   A F G+    PF+T  GP TS + G IS
Sbjct:   77 AAPAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCG---EDEPRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVNDDLQATFDGK----PFLTPNGPCTSTMKGAIS 245          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig785.19110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI2.890e-11873.28Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA6.760e-8072.16Endothelial monocyte-activating polypeptide II pro... [more]
W7U6C4_9STRA2.500e-6461.80Endothelial monocyte-activating polypeptide ii pro... [more]
A0A7S3M138_9STRA3.310e-6064.41Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S0XDL6_9STRA6.540e-5857.89Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2R5F0_9STRA6.250e-5655.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0ZE83_9RHOD7.140e-5656.98Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A5J4Z2W6_PORPP1.520e-5558.14Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]
A0A2V3IUX7_9FLOR2.050e-5558.24Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]
A0A7S2V4I0_9STRA3.390e-5457.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 90..257
e-value: 1.1E-49
score: 170.5
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 68..258
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.609
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 100..197
e-value: 2.8E-29
score: 101.0
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 94..200
score: 30.77
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 95..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig785contigF-serratus_M_contig785:359213..365057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig785.19110.1mRNA_F-serratus_M_contig785.19110.1Fucus serratus malemRNAF-serratus_M_contig785 359213..365057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig785.19110.1 ID=prot_F-serratus_M_contig785.19110.1|Name=mRNA_F-serratus_M_contig785.19110.1|organism=Fucus serratus male|type=polypeptide|length=262bp
MRAVSSLVSFSALATSSAFVVPGVTISHAFRGRTGWAGALRYVSRAHRSS
TSRVLALRRPAPGAGGMMMSETTTTTTTDDEHGVEAAPRGELTELARLEI
RVGKILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLG
RDVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLCPPAGVPLGELVT
FEGHSSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAPFMTSKG
PITSPLPGPIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold