mRNA_F-serratus_M_contig785.19107.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: D7FMW3_ECTSI (Cytochrome b5 reductase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW3_ECTSI) HSP 1 Score: 473 bits (1217), Expect = 1.220e-153 Identity = 261/426 (61.27%), Postives = 309/426 (72.54%), Query Frame = 2
Query: 929 EGGLQDGEVD--EEEWREAQEVT------QDRQRQFGREGVRMVNSRRSAPEHALPSRTSVLDVSLDRCVLPEPVGPFVAWGTGVSASLAAVAVVARIPRVVGAIGNTVTQTVEPAYRQ--SPLPEVVGNL-------RYASRLWAGSLRAWASQRAEAWERAFGPEVEMLPVEDWSVCTLLERNLEG-GHVVRYRFALQDSPNAVLPLELGQEMTLCGLDSSNHVVHGNYVPLTPRKQRGHFDIAVRRESAG--LYNGFGSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFALYGHLEKAFFRNHRKLDVSCIVERDLFGHHLESNANLREAAPDFKTGTLAAVAGPEFFVRKVSDYLVRRGYPEDVIIVL 2146
EGG ++ E++ EEEW E +E + RQ++ REG S + +L+VSLDR V+PEPV P V WGT +A L VAV ARIPR++GA+G + T TV +P V G L RY +R+WAGSL +WAS+R++ W AFGPE +LP DWSVCTLLE+ EG G + RYRF L SP+AVLPLELGQE+TLCGLD+SN VV GNYVPLTPRKQRG F++ V + + G L +G +TRS REF RFLD+LPL GDEIAVKPGR GLVY G P+TDLVL+A G+GVVPMIQMVNELLPS SSV+SASV+WLNEKAEDFALY LEKAFFRNHRKLDVSCIVERDLFG HLE+NAN+ A+P+FK GTLAAVAGP+FF RKV+DYLVRRGYPED II L
Sbjct: 10 EGGAEETEMNGAEEEWTEVREAATRETELRRRQQRLYREGEXXXXXXXXXXXVLASSSSPLLEVSLDRSVMPEPVVPPVMWGTTTAAFLGVVAVTARIPRLLGAVGKSSTVTVGNTLGPVATPAAGVAGKLASAFPGLRYGARVWAGSLGSWASRRSQQWAEAFGPEAVVLPANDWSVCTLLEKVREGDGGLYRYRFGLPSSPDAVLPLELGQELTLCGLDASNQVVQGNYVPLTPRKQRGAFEVVVMKATDGAELDDGLPTTRSNREFSRFLDNLPL-GDEIAVKPGRAGLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIIGL 434
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: A0A836CM13_9STRA (Cytochrome b5 reductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM13_9STRA) HSP 1 Score: 340 bits (872), Expect = 3.140e-104 Identity = 183/350 (52.29%), Postives = 233/350 (66.57%), Query Frame = 2
Query: 1115 LPEPVGPFVAWGTGVSASLAAVAVVARIPRVVGAIGNTVTQTVEPAYRQSPLPEV---VGNLRYASRLWAGSLRAWASQRAEAWERAFGPEVEMLPVEDWSVCTLLERNLEGGHVVRYRFALQDSPNAVLPLELGQEMTLCGLDSSNHVVHGNYVPLTPRKQRGHFDIAV---RRESAGLYNGFGSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFALYGHLEKAFFRNHRKLDVSCIVERDLFGHHLESNANLREAAPDFKTGTLAAVAGPEFFVRKVSDYLVRRGYPEDVIIVL 2146
+P PV P + AVA+ AR+P V+GA+G A + V +G+ RYA RL GS +AW + A+ RAFGPE MLP DWSVCTL ER G V+YRF L P VLPLELGQE+TLCGLD++ V + VPL+PR +G+ D+ V R A L + +F R L++L + GDE+A +PGR L Y GPY+P+TD+VLIA GLGVVPM+Q+V ELLP+R+SSV +ASV+WLNE AEDFALYG LE+AF++ HRKLDV+CI+ERDLFGH L N +REA P F+ GTLA V+GP+FFV KV DYLVR+GYP++VII +
Sbjct: 1 MPPPVPPVLVGAATTLLVCLAVALAARVPLVLGALGRAAAGAWGGAAALAARANVGGALGDARYALRLALGSAQAWMDEVHAAFNRAFGPEDVMLPANDWSVCTLQERMRVGNGCVKYRFKLP-GPACVLPLELGQELTLCGLDAAGRVASASCVPLSPRAAQGYVDVVVAKPRPPDAPLTAAGAAAVGGADFARLLETLAI-GDEVAARPGRAMLQYRGPYAPITDVVLIACGLGVVPMLQLVRELLPARESSVRAASVVWLNEAAEDFALYGELERAFYKYHRKLDVACIIERDLFGHALAGNRRVREAVPAFRIGTLAVVSGPDFFVAKVRDYLVRQGYPDEVIITV 348
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: A0A6H5KGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP4_9PHAE) HSP 1 Score: 268 bits (684), Expect = 8.510e-80 Identity = 134/175 (76.57%), Postives = 149/175 (85.14%), Query Frame = 2
Query: 1622 ESAGLYNGFGSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFALYGHLEKAFFRNHRKLDVSCIVERDLFGHHLESNANLREAAPDFKTGTLAAVAGPEFFVRKVSDYLVRRGYPEDVIIVL 2146
+ A L +G +TRS REF RFLD+LPL GDEIAVKPGR LVY G P+TDLVL+A G+GVVPMIQMVNELLPS SSV+SASV+WLNEKAEDFALY LEKAFFRNHRKLDVSCIVERDLFG HLE+NAN+ A+P+FK GTLAAVAGP+FF RKV+DYLVRRGYPED II L
Sbjct: 5 DGAELDDGLPTTRSNREFSRFLDNLPL-GDEIAVKPGRARLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIISL 178
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: A0A7S2FHA9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHA9_9STRA) HSP 1 Score: 179 bits (454), Expect = 8.150e-45 Identity = 108/301 (35.88%), Postives = 160/301 (53.16%), Query Frame = 2
Query: 1262 SPLPEVVGNLRYASRLWAGSLRAWASQRAEAWERAFGPEVEMLPVEDWSVCTLLERN-LEGGHVVRYRFALQDSPNAVLPLELGQEMTLCGLDSSNHVVHGNYVPLTPRKQRGHFDIAVRRES----AGLYNGFGSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFALYGHLEKAFFRNHRKLDVSCIVERDLFGHHLESNANLREAAPD-FKTGTLAAVAGPEFFVRKVSDYLVRRGYPEDVIIVL 2146
SP P VV L+ L G +A + W P+ E L +W+ CTL + + G RY F L +S L LGQ ++L G+D +N V+ + +P TPR G FD+ + E A ++ +E E F + G++IA KPG E L Y+G Y P+ D+ IA+GLG+VP + ++NELLPSR SSV +A+++W+NE DF Y +E +++ +KLDVSC+++ D FG L N + PD + G + VAGPE F V+ L + +PE I+ L
Sbjct: 165 SPPPAVVHRLK----LLKGKGANFADSVRDTWTWVMPPQREQLGDGEWAACTLAGKTPITGSGCTRYSFRL-NSARQTFGLGLGQALSLIGIDEANRVLKVHMIPATPRLMAGSFDLILPDEDIETKAQASRSLTASNAEEEGFGAMVQTMELGEQIAAKPGDERLTYDG-YLPIDDVHCIASGLGIVPALGLLNELLPSRASSVETANLVWVNEDEGDFVNYVDMENVWYKFSKKLDVSCVLDNDTFGSELWENEAFIASVPDSYVEGMMIVVAGPENFQLNVAKELAAKDFPEGAIVCL 459
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: A0A7S2XRE5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRE5_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.560e-43 Identity = 111/280 (39.64%), Postives = 154/280 (55.00%), Query Frame = 2
Query: 1370 GPEVEML--PVEDWSVCTLLERNLEGGHV---------VRYRFALQDSPNAVLPLELGQEMTLCGLDSSNHVVHGNYVPLTPRKQR---GHFDIAVRRESAGLYNGF-GSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFAL-YGHLEKAFFRNHRKLDVSCIVERDLFGH-----HLESNANLREAAPDFKTGTLAAVAGPEFFVRKVSDYLVRRGYPEDVIIVL 2146
GP V M W VCT+ + + G + V+Y F+L S N LPL LGQ++TLC LD+++ V N+ PL+ R G F +AV S G+ R+ F R L GDEIA++PG + L Y G Y PVTD+V +A+G G+VP+++ V +LPS SSV + SV+W+N A DF + LEK +F+ +KL VSC+VE G ++ N + EA P+F GT+A ++GP F K YL+ RGYPED I VL
Sbjct: 240 GPGVPMKIDATTKWGVCTMGYSSSDDGSIAKPIGKSSMVQYDFSLSTS-NQYLPLALGQQLTLCCLDNNDKVTKANFYPLSSSNNRRTLGSFSLAVPDHSWEENETIMGADRAN--FIRVLKEDLKEGDEIAIQPGPQTLHYRGQYLPVTDMVYMASGPGIVPIVEQVRAVLPSGKSSVKAVSVVWINHNAHDFDVALDALEKEYFKYSKKLLVSCLVEPKWNGKKSEAPRMDQNDEINEAVPNFNPGTMAVLSGPRRFADKAKIYLISRGYPEDCICVL 516
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: A0A7S2A766_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A766_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.230e-42 Identity = 109/259 (42.08%), Postives = 149/259 (57.53%), Query Frame = 2
Query: 1391 PVED-WSVCTLLERNLEG-GHVVRYRFALQDSPNA--VLPLELGQEMTLCGLDSSNHVVHGNYVPLTPRKQRGHFDIAV--RRESAGLYNGFGSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFAL-YGHLEKAFFRNHRKLDVSCIVERDLFGHHLESNANLREAAPDFKTGTLAAVAGPEFFVRKVSDYLVRRGYPEDVIIVL 2146
P +D W VC L + G VRY F D P A VLPL LGQ +TLC LD S+++V GN+ T ++ G F I + + E Y+ G+ R++ F L GDEIA+KPG L Y G Y PVTD+V +A+G+G+VP++ V +LPS SSV S++W+N +DF + LE+ +F+ + KL VSCI E ++ LE N + EA PDF GT+A ++GP F K YL RGYPED + VL
Sbjct: 218 PEDDGWGVCMLRSKEHIGRSPFVRYDF---DLPRADYVLPLSLGQTITLCCLDESDNIVEGNFY--TFKEDTGTFSIVLPEKNEEETEYD-IGADRAK--FAHVLKGEMGIGDEIALKPGVSTLNYRGQYLPVTDIVYVASGVGIVPILDQVKAVLPSGSSSVKGVSLVWINGDGKDFDVAINELEEEYFKYNTKLAVSCIGE-NVRKKALEENEEIEEAVPDFNPGTMAVISGPRAFSEKAKAYLKNRGYPEDCLCVL 467
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: A0A7S2BHE3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BHE3_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.460e-42 Identity = 97/267 (36.33%), Postives = 146/267 (54.68%), Query Frame = 2
Query: 1349 EAWERAF-GPEVEMLPVEDWSVCTLLERNLEG-GHVVRYRFALQDSPNAVLPLELGQEMTLCGLDSSNHVVHGNYVPLTPRKQRGHFDIAVRRESAGLYNGFGSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFALYGHLEKAFFRNHRKLDVSCIVERDLFGHHLESN-ANLREAAPDFKTGTLAAVAGPEFFVRKVSDYLVRRGYPEDVII 2140
EAW R + ++E+LPV +W+ CTL + G RY F L + P+ L LELGQ +TL GLDS N V +P+TPR G FD+ + L + ER F L + + G+++A KP E + PVTDL LI +G G+V + ++ ELLP R SS+ +A+++W+ + F Y LEK +++ +KLDVSC+V G L N A L P FK G + ++GPE F + VS+ ++ +P+D ++
Sbjct: 242 EAWRRVWPSKDLELLPVGEWAACTLTSKLALGLSGATRYSFRLSN-PSQTLGLELGQSITLIGLDSQNRVRRSEVLPVTPRDSLGKFDVIIYDNENSLASF--KNEDERSFSGMLSKMAI-GEQVAAKPAEESALPFSGSLPVTDLHLIVSGTGIVTALNLLRELLPERSSSIDTANLVWVETSEDGFVGYSDLEKTWYKYSKKLDVSCLVNDVTSGIQLTKNEAFLSVIPPTFKEGMMLVISGPEDFRKSVSEAMIMSDFPKDYVV 504
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: A0A7S3KXF0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXF0_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.100e-41 Identity = 103/278 (37.05%), Postives = 153/278 (55.04%), Query Frame = 2
Query: 1343 RAEAWERAFGPEVEMLPV------EDWSVCTLLERNLEGG-HVVRYRFALQDSPNAVLPLELGQEMTLCGLDSSNHVVHGNYVPLTP--RKQRGHFDIAVRRESAGLYNGFGSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFALYGH-LEKAFFRNHRKLDVSCIVERDLFGHHLESNANLREAAPDFKTGTLAAVAGPEFFVRKVSDYLVRRGYPEDVIIVL 2146
R E + P+ E +P+ E W V TL R G + ++Y F L + P+ VLPLELGQ+++LC LD+ +V G++ P +P + + G F + V ++ N F R + GDE+A+KPG L Y G Y PVTD++ +A G G+VP+++ +LP SSV++ +V+W+NE+ +DF + LEK +F+ KL VSCIV+ ++N + A PDFK GT+A +AGP + K YL RGYP D I VL
Sbjct: 156 RIERFVERVKPDEEGIPMPFEEGNEGWGVSTLRSRKRLGKTNFIQYEFELPE-PDYVLPLELGQQVSLCCLDNEGNVARGDFFPFSPTGKTKPGSFSVLVPNKTPE-ENIVLLGLEAANFCRVVKQELKIGDEVAIKPGDTRLNYRGQYLPVTDILYVACGNGIVPVLEQARAVLPRGSSSVAAVTVVWINEETKDFDVLAEVLEKEYFKYSDKLAVSCIVDSPRRRDWSDNN-EINAAVPDFKQGTMAVLAGPTDLMEKAFYYLEDRGYPSDTICVL 430
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: B7FWJ3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWJ3_PHATC) HSP 1 Score: 167 bits (423), Expect = 4.880e-41 Identity = 98/254 (38.58%), Postives = 140/254 (55.12%), Query Frame = 2
Query: 1397 EDWSVCTLLERNLEG-GHVVRYRFALQDSPNAVLPLELGQEMTLCGLDSSNHVVHGNYVP--LTPRKQRGHFDIAVRRESAGLYNGFGSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFALYGHL-EKAFFRNHRKLDVSCIVERDLFGHHLESNANLREAAPDFKTGTLAAVAGPEFFVRKVSDYLVRRGYPEDVIIVL 2146
+ W +CTL + G + ++Y F L + P+ VLPL+LGQ++++ LD V G++ L+ + G F I S N S F R L GDEIA+KPG L Y G Y PVT +V IA G G+VP++ V +LP+ SSV+S SV+W+NE+A+DF + L EK +++ +KL VSC+V+ + L N + A PDF GT+A +AGP +K +L RGYP D I VL
Sbjct: 176 DGWGICTLKSKERLGKSNFMQYTFDLPE-PDYVLPLDLGQQISMMCLDDDGDVAQGDFFSYNLSASPKPGSFTILFPTGSHE-ENTCSIGSSGANFLRALKQDVKVGDEIALKPGPIKLSYRGQYLPVTGMVYIACGTGIVPVLDQVRAVLPADSSSVTSVSVVWINEEAKDFDVTAELLEKEYYKYSKKLAVSCVVDNTMQRQSLGDNTEVHAAVPDFTQGTMAVIAGPSDMAKKAIAFLENRGYPRDTICVL 427
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Match: F0YEX5_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEX5_AURAN) HSP 1 Score: 164 bits (415), Expect = 1.400e-40 Identity = 109/332 (32.83%), Postives = 160/332 (48.19%), Query Frame = 2
Query: 1217 IGNTVTQTVEPAYRQSPLPEVVGNLRYASRLWAGSLRAWASQRAEAWERAFGPEVEMLPVEDWSVCTLL------ERNLEGGHVVRYRFALQDSPNAVLPLELGQEMTLCGLDSSNHVVHGNYVPLTPRKQRGHFDIAVR-------RESAGLYNGFGSTRSEREFFRFLDSLPLAGDEIAVKPGREGLVYNGPYSPVTDLVLIATGLGVVPMIQMVNELLPSRDSSVSSASVIWLNEKAEDFALYGHLEKAFFRNHRKLDVSCIVERDLFGHHLESNA----------NLREAAPDFKTGTLAAVAGPEFFVRKVSDYLV-RRGYPEDVII 2140
+G T V PA ++ G+ +L AG +RA A AW F E ++ + W+ C L + G YRFAL+ AVLPLELGQE+T GLD N V ++ + R+ G ++ V RE+ G G T +R D L + G E AV+PGR Y G Y P+T L A LG +P+IQ++ E LP S+++ A V W+NE +DF LY LE F++ +K++++C+V+ L NA +L A ++ G LA VAGP+ F +V +L +GYP + I+
Sbjct: 39 VGYTAVSLVAPALGRAAGGAAAGSGPEWLKLRAGQVRATADALKLAWSDLFEDESLVVLEDTWAPCVLEATEDFGDDGAGGAAYTAYRFALKQGGKAVLPLELGQEVTFVGLDGRNRPVRASFPLASNRRDAGAVEVVVAAPGRRRAREAVG-----GLTAEQRAVVDAFDGLGIGG-EAAVRPGRRAFTYEGSYLPITSLQCFAEELGALPVIQLLKESLPRGRSTIAKAQVFWINEGEDDFGLYEGLETLFYKFPKKMELACVVDDKLHSPDTTKNAPGDAVFRRNDDLAGAVAPWQPGMLAVVAGPDAFQDQVVAHLTGAKGYPPECIV 364 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig785.19107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig785.19107.1 >prot_F-serratus_M_contig785.19107.1 ID=prot_F-serratus_M_contig785.19107.1|Name=mRNA_F-serratus_M_contig785.19107.1|organism=Fucus serratus male|type=polypeptide|length=690bp MIAGLPSAVDPEGSAVGEERSRTRSGGAAMQSRRRTRQGCHLPSVSAAARback to top mRNA from alignment at F-serratus_M_contig785:301508..310014- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig785.19107.1 ID=mRNA_F-serratus_M_contig785.19107.1|Name=mRNA_F-serratus_M_contig785.19107.1|organism=Fucus serratus male|type=mRNA|length=8507bp|location=Sequence derived from alignment at F-serratus_M_contig785:301508..310014- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig785:301508..310014- >mRNA_F-serratus_M_contig785.19107.1 ID=mRNA_F-serratus_M_contig785.19107.1|Name=mRNA_F-serratus_M_contig785.19107.1|organism=Fucus serratus male|type=CDS|length=4140bp|location=Sequence derived from alignment at F-serratus_M_contig785:301508..310014- (Fucus serratus male)back to top |