mRNA_F-serratus_M_contig784.19093.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: D7FVZ6_ECTSI (C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ6_ECTSI) HSP 1 Score: 346 bits (887), Expect = 4.140e-103 Identity = 205/393 (52.16%), Postives = 251/393 (63.87%), Query Frame = 1
Query: 1 CRILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAG-----ETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDGYMTKRHQTGRSFQRRNLDSVTLSFVWMGQVRSLDQKTTVYGIRTLPPWLLPGVAM-GVESSERTAKALGNRAELSSGKPIAGVGASLPTRAVD--TLGIDDQRGVNDRGQTAKTCDSDSSGRTGIDPIVLPEVCALCGKRYKTAQAVRTHTRQQHELGHGG 1155
CRIL LGDGNFSFSLALA+A+L+P + S Q R ++ E+VATSFDG++DL +KY EA GI+A LRS+G TVLHNVDATALDSR R + + ++H+IFNHPHTGTEDMRRHRSFLGHFFHAV N+ + + P +G + ++ G +GG+ +ILAPGGAVHVTLA DQPERWGL EQAARHGF+L HRRRFPAE IDGYMTKRHQTGRSF++R S TLSF W ++ TLPPWL P V M G E+S RAE ++ +P+ G+ AVD T +DD G+ C +D +G + + LPEVC LCGKRYK+AQA+RTHTRQ HELG G
Sbjct: 13 CRILILGDGNFSFSLALAKALLLPPTPHLLPSSPQARLQQQTFEIVATSFDGRLDLLSKYAEAPGIVAALRSVGVTVLHNVDATALDSRVLQVSPSDRR-RAQQQQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAIGSTGPVGGGGSGACGVSDIGGGGAVAAVPGMADRQGGKG---AILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRRFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAARGDDGAAFGSTLPPWLWPEVVMCGDEASPA-------RAETATDEPVRAGGSD----AVDAPTPAVDDNVRTRGGGRKGGGC-TDRTGAAAAEAL-LPEVCELCGKRYKSAQALRTHTRQFHELGQEG 388
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: K3WT47_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT47_GLOUD) HSP 1 Score: 127 bits (319), Expect = 3.860e-27 Identity = 119/397 (29.97%), Postives = 175/397 (44.08%), Query Frame = 1
Query: 4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATAL-----DSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHR-RRFPAENIDG--YMTKRHQTGRSFQRRNLDSVTLSFVWMGQVRSLDQKTTVYGIRTLPPWLLPGVAMGVESSERTAKALGNRAELSSGKPIAGVGASLPTRAVDTLGIDDQRGVNDRGQTAKTCDS-----------DSSGRTGIDPIVLPEVCALCGKRYKTAQAVRTHTRQQH 1137
R+LT+GDGNFS+SLA A+ L F S++QP ELVATS+D +L KYPE+ I ++LR LGA VLH VDAT L ++ E + + A++R + +D I+FNHPH G E+++RH+S L HFF + L NH +N+ S +H+TLA QPERW +A R L R + N G Y KRHQ G+SF R L + Q++T++ + E+++ + ++ + SS K VG+S +A D+ + + ++ KT G TG P+ LP C C + +K A R H +H
Sbjct: 29 RVLTVGDGNFSYSLAFAKRFLGVSSF--ASSKEQP------IELVATSYDSYDELVEKYPESARICSQLRELGAQVLHRVDATNLAVSLANAVLESRDDDEASSRSVTTQKAFDLIVFNHPHCGEENVKRHQSLLSHFFSSALQIL---------------------------NHA----SNLQS------EIHLTLAVGQPERWEAVARAKRAELTLKQCVRDVDSHNDYGLVYERKRHQNGKSFHRVLLHG-----------EKVQQESTLFIFTQRREGEDDNLVSTSETAKPQQSSSNSQVQESSAKVPGTVGSSRKRKAQDSALMQHEFACEACEKSFKTAQGLKTHAHMVHELSKGGVTG--PVSLP--CGFCDRTFKNEDAQRQHRLAKH 365
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A5D6Y3S2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3S2_9STRA) HSP 1 Score: 123 bits (309), Expect = 7.250e-26 Identity = 126/409 (30.81%), Postives = 167/409 (40.83%), Query Frame = 1
Query: 7 ILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATAL-------DSRNEGTEREGAAAR-CGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG-------YMTKRHQTGRSFQRRNLDSVTLSFVWMGQVRSLDQKTTVYGIRTLPPWLLPGVAMGVESSERTAKALGNRAELSSGKPIAGVGASLPTRAVDTLGIDDQRGVNDRGQTAKTCDSD----------SSGRTGIDPIVLPEVCALCGKRYKTAQAVRTHTRQQHELGHGGA 1158
+LT+GDGNFSFSLA AR RF PR +L A+SFD +L AKYPEA + +LR+LGA VLH VDAT L ++ G E G A R +D ++FNHPH G E++RRHRS L HF+ AS R +LAP G + +TLA QP RW +A R G L + +++D Y KRHQ GRSF R L L Q++T++ G G S+ TA+ G A + S +A D N+ ++ KT S G P++LP C LC + +K A A +QQH L G+
Sbjct: 16 VLTVGDGNFSFSLAFAR------RF--------PR-----AQLAASSFDSAQELAAKYPEAPRHVHQLRALGARVLHRVDATQLRASLAQAETAEVGDEEGGPAPRPASPLPARFDVVVFNHPHCGEENVRRHRSLLSHFY-------------------------ASAR----------------ELLAPRGEIRLTLAAGQPARWEALARARRAGLRLTQQ----VDDVDSDEAFGLAYERKRHQNGRSFHRVLLHG-----------ERLQQQSTLFIFEREEN---EGEDAGTTGSQETAEGEGAIAAATVATVTPPDAPSRKRKARDAAS--QPFACNECEKSFKTAQGLKTHVHMVHELSGGAAQAAPVLLP--CGLCDRTFKNADA-----QQQHRLAKHGS 337
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A225VJE6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VJE6_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.180e-24 Identity = 93/273 (34.07%), Postives = 132/273 (48.35%), Query Frame = 1
Query: 4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG-------YMTKRHQTGRSFQR------RNLDSVTLSFVWMGQVRSLD 783
R+LT+GDGNFS+SLALA+ T++ Q L ATS+D +L AKYPE++ I +L+ LGA+VLH VDAT + RE A + +D ++FNHPH G E++RRH+S L HF+ + L+ LE E N ++ + +TLA QPERW E+A + G L HR+ +N+D Y KRHQ G+SF + R S TL F++ Q ++D
Sbjct: 40 RVLTVGDGNFSYSLALAKQ---------TDTTLQ---------LTATSYDSYDELVAKYPESKRICTQLKELGASVLHRVDATNI--------RESLVAE-----QKFDSVVFNHPHCGEENVRRHQSLLSHFYASALDV------------------------------LEENEENEWN------GILLTLAEGQPERWQAVERAQKAGLRL-HRQ---VDNVDNDEVFGFAYERKRHQNGKSFHQVTLHGERKKQSSTL-FIFRRQKDAMD 240
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A329SAD3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SAD3_9STRA) HSP 1 Score: 117 bits (294), Expect = 4.150e-24 Identity = 86/247 (34.82%), Postives = 118/247 (47.77%), Query Frame = 1
Query: 4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG----YMTKRHQTGRSFQRRNL 732
R+LT+GDGNFS+SLALA+ Q + +L ATS+D +L AKYPE + I A+L+ LGA+VLH VDAT + RE A G +D ++FNHPH G E++RRH+S L HF+ + L L+G E + S + +TLA QPERW E+ + G L HR+ +N + Y KRHQ G+SF + L
Sbjct: 51 RVLTVGDGNFSYSLALAK-------------QHNRQDNDTILQLTATSYDSYDELVAKYPECKRICAQLKELGASVLHRVDATNI--------RESLVA-AGAEQLKFDAVVFNHPHCGEENVRRHQSLLSHFYASALEV------------------------------LQGNEEDEES------GILLTLAEGQPERWQAVERGLKAGLRL-HRQIDDVDNDEVFGLVYERKRHQNGKSFHQVTL 238
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A8K1C3C0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3C0_PYTOL) HSP 1 Score: 117 bits (292), Expect = 4.780e-24 Identity = 86/249 (34.54%), Postives = 117/249 (46.99%), Query Frame = 1
Query: 4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPG-GAVHVTLAGDQPERWGLREQAARHGFAL--------AHRRRFPAENIDGYMTKRHQTGRSFQR 723
++LT+GDGNFSFSLA + QQ RRE+++ LVA+S+D +L KYPE+ I +L+ LGA +LH +DAT L + E E + +D IIFNHPH G E++RRH+S L HF+ + +L P G +H+TLA QPERW RE+ + G L AH P ++D Y KRHQ G+SF R
Sbjct: 28 QVLTVGDGNFSFSLAYLK-------------QQLQRREQLR--LVASSYDEYQELLEKYPESIRICTQLQELGADLLHRIDATNLRATLEACASENGEVQLPTT---FDVIIFNHPHCGEENVRRHQSLLSHFY-----------------------------------------ASAKELLHPTRGELHLTLADGQPERWEARERGTKAGLVLVEEIEDVDAH----PVYSVD-YERKRHQNGKSFHR 212
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A0W8CDT8_PHYNI (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CDT8_PHYNI) HSP 1 Score: 117 bits (292), Expect = 5.130e-24 Identity = 86/247 (34.82%), Postives = 120/247 (48.58%), Query Frame = 1
Query: 4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG----YMTKRHQTGRSFQRRNL 732
R+LT+GDGNF++SLALA+ Q + + +L A+S+D +L AKYPE + I A+L+ LGA+VLH VDAT L RE A G +D +IFNHPH G E++RRH+S L HF+ + L+ +E E + S + +TLA QPERW E+A + G L HR+ +N + Y KRHQ G+SF + L
Sbjct: 36 RVLTVGDGNFTYSLALAK-------------QHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELGASVLHRVDATNL--------RESLVA-AGAEQLKFDAVIFNHPHCGEENVRRHQSLLSHFYASALDV------------------------------IEDNEEDEES------GILLTLAEGQPERWQAVERALKAGLRL-HRQVDEVDNDEVFGLVYDRKRHQNGKSFHQVTL 223
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: G5AE26_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AE26_PHYSP) HSP 1 Score: 117 bits (292), Expect = 5.580e-24 Identity = 87/251 (34.66%), Postives = 123/251 (49.00%), Query Frame = 1
Query: 4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVK-CELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG-------YMTKRHQTGRSFQRRNL 732
R+LT+GDGNFS+SLALA+ Q + + + + +L ATS+D +L AKYPE++ I A+L+ LGA+VLH VDAT + RE A G + + ++FNHPH G E++RRH+S L HF+ + L LE GE + G + +TLA QPERW ++A G L HR+ +N+D Y KRHQ G+SF + L
Sbjct: 37 RVLTVGDGNFSYSLALAK-------------QHKSKGDDTRPLQLTATSYDSYDELVAKYPESKRICAQLKELGASVLHRVDATNI--------RESLVA-AGATSDKFHSVVFNHPHCGEENVRRHQSLLSHFYASALEV------------------------------LEKGEGDEVEQSEESGIL-LTLAEGQPERWQAVQRALSAGLKL-HRQ---VDNVDSDAKFGLEYERKRHQNGKSFHQVTL 230
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: A0A3M6VPR7_9STRA (C2H2-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPR7_9STRA) HSP 1 Score: 115 bits (288), Expect = 5.820e-24 Identity = 87/272 (31.99%), Postives = 127/272 (46.69%), Query Frame = 1
Query: 4 RILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAENIDG----YMTKRHQTGRSFQR-----RNLDSVTLSFVWMGQVRSLDQKT 792
RILTLGDGNFS+SLALA+ + + E V +L+ATS+D +L KYPE++ I A+L LGAT+ H VDAT + +E GA + +D ++FNHPH G E++RRH+S L HF+ + L LE + G + +TLA QPERW ++A G L +R+ +N D Y KRHQ G+SF + + + F++ Q +D ++
Sbjct: 11 RILTLGDGNFSYSLALAKQL------------KNQGNESVNIQLIATSYDTYEELIGKYPESKRICAQLTQLGATICHRVDATNI---HESLVAAGAEPKL-----RFDAVVFNHPHCGEENVRRHQSLLSHFYASALEV------------------------------LEKKKXXXXXKELRG--ILLTLAERQPERWQAVQRALSAGLTL-YRQVDDVDNDDQFGLVYERKRHQNGKSFHQVTLYGEKMKQTSTLFIFRRQEDDMDTRS 229
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Match: D0NMF8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMF8_PHYIT) HSP 1 Score: 116 bits (291), Expect = 7.910e-24 Identity = 87/246 (35.37%), Postives = 119/246 (48.37%), Query Frame = 1
Query: 7 ILTLGDGNFSFSLALARAMLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLRSLGATVLHNVDATALDSRNEGTEREGAAARCGYRTRHYDHIIFNHPHTGTEDMRRHRSFLGHFFHAVLNANVPAINPAVTTNAGETASDASLRTNGGHNHLEGGETNVFSILAPGGAVHVTLAGDQPERWGLREQAARHGFALAHRRRFPAEN--IDG--YMTKRHQTGRSFQRRNL 732
+LT+GDGNFS+SLALA+ Q + + +L ATS+D +L AKYPE++ I +L+ LGA+V+H VDAT L RE A G +D ++FNHPH G E++RRH+S L HF+ + L LE E + G + +TLA QPERW E+A + G L HRR +N + G Y KRHQ G+SF + L
Sbjct: 37 VLTVGDGNFSYSLALAK-------------QHKNQGNDTPVQLTATSYDSYNELVAKYPESKRICGQLKELGASVMHRVDATNL--------RESLVA-AGAEQLTFDAVVFNHPHCGEENVRRHQSLLSHFYTSALEI------------------------------LEDSEEDE------GNGILLTLAEGQPERWQAVERALQAGLRL-HRRVDDVDNDAVFGLKYERKRHQNGKSFHQVTL 223 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig784.19093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig784.19093.1 >prot_F-serratus_M_contig784.19093.1 ID=prot_F-serratus_M_contig784.19093.1|Name=mRNA_F-serratus_M_contig784.19093.1|organism=Fucus serratus male|type=polypeptide|length=382bp MLVPVRFMITESQQQPRRERVKCELVATSFDGQIDLFAKYPEARGILAKLback to top mRNA from alignment at F-serratus_M_contig784:364587..368538+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig784.19093.1 ID=mRNA_F-serratus_M_contig784.19093.1|Name=mRNA_F-serratus_M_contig784.19093.1|organism=Fucus serratus male|type=mRNA|length=3952bp|location=Sequence derived from alignment at F-serratus_M_contig784:364587..368538+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig784:364587..368538+ >mRNA_F-serratus_M_contig784.19093.1 ID=mRNA_F-serratus_M_contig784.19093.1|Name=mRNA_F-serratus_M_contig784.19093.1|organism=Fucus serratus male|type=CDS|length=2292bp|location=Sequence derived from alignment at F-serratus_M_contig784:364587..368538+ (Fucus serratus male)back to top |