mRNA_F-serratus_M_contig784.19081.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI) HSP 1 Score: 335 bits (860), Expect = 1.430e-102 Identity = 168/209 (80.38%), Postives = 187/209 (89.47%), Query Frame = 1
Query: 61 ASKPRVFSMQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARDTEEDVVQPASLMLARLSGEQFPLVQYDFVDLVHALLEMAASRFPDVSLECMGHLWSCARELGEGRVDVALQRPLLE 687
A+KPRVFSMQKLVE+AHLNMD+RSRIEWA LWG LA+H GTVGS+SG +SVAMYTVDCLRQLALKFLDKDELRDFNFQR+F+GPFATI R SRE A+RELVVSCLN VILTKG L+RSGWKTVL+VLR+AA DT+E+VVQPA L+L L+GE FPLVQYDFVDLV+ LLEMAASRF DVSL C+GHL CAR+L EG VDVALQRPL E
Sbjct: 1333 AAKPRVFSMQKLVEVAHLNMDIRSRIEWASLWGILADHFGTVGSISGNSSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIVRTSRETAVRELVVSCLNNVILTKGTLLRSGWKTVLTVLRSAAADTQEEVVQPACLILEGLAGETFPLVQYDFVDLVYTLLEMAASRFLDVSLVCIGHLRLCARQLAEGGVDVALQRPLPE 1541
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: A0A6H5KJ76_9PHAE (DUF1981 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ76_9PHAE) HSP 1 Score: 314 bits (804), Expect = 7.670e-96 Identity = 159/204 (77.94%), Postives = 178/204 (87.25%), Query Frame = 1
Query: 85 MQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARDTEEDVVQPASLMLARLSGEQFPLVQYDFVDLVHALLEMAASRFPDVSLECMGHLWSCARELGEGRVDVALQ---RPLLE 687
MQKLVE+AHLNMD+RSRIEWA LWG LA+H TVGS+SG +SVAMYTVDCLRQLALKFLDKDELRDFNFQR+F+GPFATI R SRE A+RELVVSCLN VILTKG ++RSGWKTVL+VLR+AA DT+E+VVQPA L+L L+GE FPLVQYDFVDLV+ LLEMAASRF DVSL C+GHL CAR+L EG VDVALQ RPL E
Sbjct: 1 MQKLVEVAHLNMDIRSRIEWASLWGILADHFATVGSISGNSSVAMYTVDCLRQLALKFLDKDELRDFNFQRVFLGPFATIVRTSREPAVRELVVSCLNNVILTKGTMLRSGWKTVLTVLRSAAADTQEEVVQPACLILEELAGETFPLVQYDFVDLVYTLLEMAASRFLDVSLVCIGHLRLCARQLAEGGVDVALQPNKRPLPE 204
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: A0A835ZB96_9STRA (SEC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB96_9STRA) HSP 1 Score: 234 bits (596), Expect = 4.100e-67 Identity = 120/202 (59.41%), Postives = 146/202 (72.28%), Query Frame = 1
Query: 70 PRVFSMQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARDTEEDVVQPASLMLARLSGEQFPLVQYDFVDLVHALLEMAASRFPDVSLECMGHLWSCARELGEGRVDVALQR 675
PRVFS+Q+LVE+A NMD+RSRI+WA +WG +A HL VG M G ++VAMY +DCLRQLALKFL K+ELRDFNFQR F+GPF I R S+ A RELV CL+ VI + IRSGWKT+L+VL AARD EE +VQ A ++ RL +F LV +DF DLV LL MA + DV+L C+GHL +CAR L G VDVA QR
Sbjct: 483 PRVFSLQRLVEVADYNMDIRSRIDWASMWGDIAGHLAAVGCMPGNSAVAMYAIDCLRQLALKFLTKEELRDFNFQREFLGPFEDIMRRSQHAPTRELVARCLDNVIAARAANIRSGWKTLLTVLTLAARDPEEAIVQLACGVVDRLVAARFALVAHDFADLVACLLAMARAPHLDVALSCVGHLRTCARALAAGDVDVARQR 684
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: A0A7S2AIA2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIA2_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.540e-47 Identity = 95/204 (46.57%), Postives = 130/204 (63.73%), Query Frame = 1
Query: 70 PRVFSMQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARDTEEDVVQPASLMLARLSGEQFPLVQYDFVDLVHALLEMAASRFPD--VSLECMGHLWSCARELGEGRVDVALQR 675
PRVFS+QKLVE+A NMD+R RI W+ +WG L +H G G SVA+Y VD LRQL+ KFL KDELR+FNFQR+F+ PF I SR IREL++ C++ +IL + P IRSGWK++ +VL AA D +V A +LAR++ QF L+ DF ++V+ LL A S + L + + CA LGEG++ + L +
Sbjct: 250 PRVFSLQKLVEVASFNMDIRPRIIWSAVWGVLGDHFARAGLHPNG-SVALYAVDSLRQLSAKFLAKDELREFNFQRMFLKPFEVIMSESRVVDIRELIIECVDTLILARAPNIRSGWKSLFAVLSLAAADRVPTMVDAAFSILARVTTTQFDLLVGDFTEVVNCLLCFAGSEMVNEPTRLRALELVKLCAVSLGEGKMGLLLAK 452
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: A0A4D9CUH3_9STRA (SEC7 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUH3_9STRA) HSP 1 Score: 164 bits (416), Expect = 5.970e-43 Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 1
Query: 61 ASKPRVFSMQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARDTEEDVVQPASLMLARLSGEQFPLVQYDFVDLVHALLEMAAS-RFPDVSLECMGHLWSCARELGEGRVDVAL 669
A +PRVFS+QKLVE+A NM RSR+ WA +W L+ H VG + +VAMY +D LRQL++KFL K+ELRDFNFQR+F+ PF I SR IREL++ CL+ +I + IRSGW+++ +V AA +E + Q A ++ +L F + +DFVDLVH LL A + VSL + HL L EG V +
Sbjct: 1220 ALQPRVFSLQKLVEVADFNMAARSRLVWANVWEVLSRHYAAVG-LHDNVAVAMYAIDSLRQLSMKFLAKEELRDFNFQRLFLKPFEVIMATSRSIEIRELILRCLDNLISVRAHNIRSGWRSMFAVFSLAASSPDEGLCQFAFDIVDQLFRAHFQFLVFDFVDLVHCLLAFAENDNHLHVSLAAIAHLQRAGSLLAEGVVTAGM 1422
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: A0A835YNY5_9STRA (SEC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNY5_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.530e-42 Identity = 85/193 (44.04%), Postives = 120/193 (62.18%), Query Frame = 1
Query: 64 SKPRVFSMQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARDTEEDVVQPASLMLARLSGEQFPLVQYDFVDLVHALLEMAASRFPDVSLECMGHLWSCAREL 642
S PR+FS+Q+LVE+A NMD RSRI WA +WG L+ H +G+ VAMY +D LRQLA KF+ K+ELRDFNFQR+FM PF T+ SR IRE V+ C+ +I ++ IRS WK++ +VL AAARD + ++ + A + L+ + F + YDF++L LL D++L + L + A L
Sbjct: 1648 SAPRIFSLQRLVEVADFNMDSRSRIVWADIWGVLSSHFAAIGAHDN-PQVAMYAIDSLRQLAHKFMAKEELRDFNFQRLFMRPFETVIALSRRLEIREFVLRCVEYLIRSRLASIRSAWKSIFAVLAAAARDPDANIARLAWATVDELATQHFGALTYDFLELTKCLLAFVEGPREDLALSAVDLLGTLAGHL 1839
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: A0A485K6Q7_9STRA (Aste57867_99 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K6Q7_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.220e-41 Identity = 94/215 (43.72%), Postives = 130/215 (60.47%), Query Frame = 1
Query: 55 SAASKPRVFSMQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARDTE----EDVVQPASLMLAR-LSGEQFPLVQYDFVDLVHALLEMA---------ASRFPDVSLECMGHLWSCARELGEGRV 657
+AAS PRVFS+QKLVE+A +NM VRSR+ WA +W L+ H T+G S+AMY +D L+QL++KFL+KDELRDFNFQR+F+ PF I N+ AIRELV+SC++ +IL++ I+SGWKT+ VLR AA + +D V MLA+ + F V F+D++ LL A + +SL+ L C + GRV
Sbjct: 987 TAASSPRVFSLQKLVEVADMNMHVRSRVVWASMWSVLSRHFTTIGCHDN-LSLAMYAIDSLKQLSMKFLEKDELRDFNFQRLFLTPFEIIMGNAVSMAIRELVLSCVHNMILSRVDNIKSGWKTIWGVLRVAAETYDPAERDDRVVLMGFMLAKTIVDTHFDRVVTVFLDMIECLLAFALCGSAEKNSSRELIQMSLDATHVLGLCLGYVASGRV 1200
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: A0A6G0X2Z8_9STRA (SEC7 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2Z8_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.510e-40 Identity = 93/212 (43.87%), Postives = 131/212 (61.79%), Query Frame = 1
Query: 64 SKPRVFSMQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARD---TEED--VVQPASLMLARLSGEQFPLVQYDFVDLVHALL--------EMAASRF-PDVSLECMGHLWSCARELGEGRV 657
S PRVFS+QKLVE+A +NM VRSR+ WA +W L+ H T+G S+AMY +D L+QL++KFL+KDELRDFNFQR+F+ PF I N+ IRELV+SC++ +IL++ I+SGWKT+ VLR AA TE+D VV ++ + F V F+DL+ +L E ++SR+ ++SL+ L C + GRV
Sbjct: 1007 SLPRVFSLQKLVEVADMNMHVRSRVVWASMWSVLSRHFTTIGCHDN-LSLAMYAIDSLKQLSMKFLEKDELRDFNFQRLFLAPFEIIMGNAVSMEIRELVLSCVHNMILSRVNNIKSGWKTIWGVLRVAAETFDPTEKDDRVVLMGFMLAKTIVDTHFDRVVTVFLDLIECILAFALCGSTEESSSRYLVEMSLDATHVLGLCLGYVASGRV 1217
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: A0A024TEP8_9STRA (SEC7 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEP8_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.530e-40 Identity = 97/228 (42.54%), Postives = 128/228 (56.14%), Query Frame = 1
Query: 19 EEAALAGRGGTASAASKPRVFSMQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARD---TEEDVVQPASLM----LARLSGEQFPLVQYDFVDLVHALLEMAASRFPDVS---LECMGH-----LWSCARELGEGRV 657
E A ++GRG T + PRVFS+QKLVE+A +NM VRSR+ WA +W L H T+G +AMY +D L+QL++KFL+KDELRDFNFQR+F+ PF I N+ IRELV+SC+ +IL + I+SGWKT+ VLR AA E +V +P M + F V FVD + LL A D S ++ M H L C +L G V
Sbjct: 1112 ECAGISGRGVTVRETNAPRVFSLQKLVEVADMNMHVRSRVVWASVWKVLTRHFTTIGCHDN-LGIAMYAIDSLKQLSMKFLEKDELRDFNFQRLFLAPFEIIMANAVATEIRELVLSCVQNMILGRVRNIKSGWKTIWGVLRVAAETYDPAEGEVARPVVAMGFSIAQMILTTHFDRVVSVFVDAIECLLAFAVCGCDDPSDAFMQKMAHDAINVLAVCLTQLATGHV 1338
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Match: W4FVP9_9STRA (SEC7 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FVP9_9STRA) HSP 1 Score: 156 bits (394), Expect = 5.030e-40 Identity = 92/224 (41.07%), Postives = 130/224 (58.04%), Query Frame = 1
Query: 31 LAGRGGTA-SAASKPRVFSMQKLVEIAHLNMDVRSRIEWAGLWGALAEHLGTVGSMSGGTSVAMYTVDCLRQLALKFLDKDELRDFNFQRIFMGPFATIFRNSREAAIRELVVSCLNVVILTKGPLIRSGWKTVLSVLRAAARDTEED-----VVQPASLMLARLSGEQFPLVQYDFVDLVHALLEMA---------ASRFPDVSLECMGHLWSCARELGEGRV 657
L G G T +AA+ PRVFS+QKLVE+A +NM VRSR+ WA +W L+ H T+G +AMY +D L+QL++KFL+KDELRDFNFQR+F+ PF I N+ IRELV+SC++ ++ ++ I+SGWKT+ VLR AA + VV ++ + F V FVD+V +L A + +SL+ + L C R + GRV
Sbjct: 661 LTGSGMTVRTAAALPRVFSLQKLVEVADMNMHVRSRVVWASMWSVLSRHFTTIGCHDN-LGIAMYAIDSLKQLSMKFLEKDELRDFNFQRLFLTPFEIIMANAVATEIRELVLSCVHNMLRSRVGNIKSGWKTIWGVLRVAAETFDAAAHDARVVLMGFMLAKTIVHSHFDRVVAVFVDVVECILAFALCGSLPSLSSGELLQMSLDAISVLGLCLRHVASGRV 883 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig784.19081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig784.19081.1 >prot_F-serratus_M_contig784.19081.1 ID=prot_F-serratus_M_contig784.19081.1|Name=mRNA_F-serratus_M_contig784.19081.1|organism=Fucus serratus male|type=polypeptide|length=229bp MRAARREEAALAGRGGTASAASKPRVFSMQKLVEIAHLNMDVRSRIEWAGback to top mRNA from alignment at F-serratus_M_contig784:16973..17659+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig784.19081.1 ID=mRNA_F-serratus_M_contig784.19081.1|Name=mRNA_F-serratus_M_contig784.19081.1|organism=Fucus serratus male|type=mRNA|length=687bp|location=Sequence derived from alignment at F-serratus_M_contig784:16973..17659+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig784:16973..17659+ >mRNA_F-serratus_M_contig784.19081.1 ID=mRNA_F-serratus_M_contig784.19081.1|Name=mRNA_F-serratus_M_contig784.19081.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig784:16973..17659+ (Fucus serratus male)back to top |