mRNA_F-serratus_M_contig784.19080.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: A0A6H5KIY2_9PHAE (SEC7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY2_9PHAE) HSP 1 Score: 135 bits (340), Expect = 4.300e-34 Identity = 70/95 (73.68%), Postives = 79/95 (83.16%), Query Frame = 1
Query: 1 GLKKAVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQDGLPLGFNDA 285
G+KKAVRIAGGLD+ +ARETL+NALVRFTLL+ SRHM+DKNVRC KVLL LALT+GNLL+ESWG VLRCISQL+RLQ A LQQD G A
Sbjct: 487 GVKKAVRIAGGLDVPVARETLLNALVRFTLLDASRHMKDKNVRCAKVLLSLALTEGNLLKESWGLVLRCISQLARLQNTASRLQQDDTLFGVTAA 581
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI) HSP 1 Score: 134 bits (338), Expect = 9.650e-34 Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = 1
Query: 1 GLKKAVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQD 258
G+KKAVRIAGGLD+ +ARETL+NALVRFTLL+ SRHM+DKNVRC KVLL LALT+GNLL+ESWG VLRCISQL+RLQ A LQQD
Sbjct: 948 GVKKAVRIAGGLDVPVARETLLNALVRFTLLDASRHMKDKNVRCAKVLLSLALTEGNLLKESWGLVLRCISQLARLQNTASRLQQD 1033
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: A0A835ZB96_9STRA (SEC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB96_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 7.890e-21 Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 1 GLKKAVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQDGLPLGFNDAEPPPRKVKDAVWKPGGAGA 342
GL++ VR+AG LDM+ ARE +NA+ ++T+++++R + K+V C+ LL +AL+DGNLLRESW VL C S+L+RLQL A L D F A+P + DA G A A
Sbjct: 239 GLRQGVRLAGALDMSTAREAFVNAIAKYTVVDSARDLRPKSVACINALLAVALSDGNLLRESWSAVLNCASRLARLQLSASGLATDD---AFFSADP----IVDASVADGAAAA 345
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: A0A7S1Y2E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2E9_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 6.760e-20 Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 1 GLKKAVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQD 258
G AVRIA DM++AR+T +N+L +FT L + ++M+ KN+ ++ LL +A+ DG L ESWGPVL+CISQLSRL+LFA L D
Sbjct: 467 GFVYAVRIAAHSDMSLARDTFVNSLAKFTFLGSVKNMKHKNIESIRTLLSIAVIDGEYLNESWGPVLQCISQLSRLRLFASGLDSD 552
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: A0A7S1U0S2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0S2_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.090e-19 Identity = 42/86 (48.84%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 1 GLKKAVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQD 258
G + A+RIAGG ++ +AR TL+NAL +FT L+T M++K++ C++ L+ +A+ DGN + ESW VLRC+SQ++RLQLFA D
Sbjct: 749 GFRLAIRIAGGFELEVARHTLMNALAKFTTLDTVTQMQEKHIDCIRTLIDVAIHDGNHMHESWELVLRCLSQVARLQLFASGAHTD 834
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: A0A7R9U5G8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5G8_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.090e-18 Identity = 42/86 (48.84%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 GLKKAVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQD 258
G + A+RIAG ++ +AR+TL NAL +FT L+T M++K++ C+K L+ +A+ DGN L SW VLRC+SQ++RLQLFA D
Sbjct: 661 GFRLAIRIAGDFELEVARDTLTNALAKFTTLDTVTQMQEKHIDCIKALIDVAINDGNNLHASWELVLRCLSQVARLQLFASGAHTD 746
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: A0A7S2KKT5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KKT5_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.340e-18 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 1 GLKKAVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQD 258
G ++R++ DM++AR T +N+L +FT L + +HM+ KN+ C++ LL +A+ DG L ESW P+L+CISQL RL LFA L +
Sbjct: 1173 GFVYSIRLSSHSDMSLARNTFVNSLAKFTTLGSIKHMKSKNIECIRTLLSVAIIDGEHLGESWSPILQCISQLGRLHLFASGLDSE 1258
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: A0A7R9ZDJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZDJ5_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 5.340e-18 Identity = 38/82 (46.34%), Postives = 61/82 (74.39%), Query Frame = 1
Query: 13 AVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQD 258
++R++ +M++AR+T +N+L +FT L +++ M+ KN+ ++ LL +A+ DG+ L ESWGPVL+CISQL RLQL+A L D
Sbjct: 312 SIRVSSHSEMSLARDTFVNSLAKFTTLGSTKEMKYKNIESIRTLLSIAIVDGDFLGESWGPVLQCISQLGRLQLYASGLDSD 393
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: A0A835YNY5_9STRA (SEC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNY5_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.360e-17 Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 1
Query: 25 AGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQDGLPLGFND------AEPPP 297
AG + +ARET IN L +FTLL+T M KNV C++ LL +A DG+ L +SWGPVLR ISQL+RL LFA +L D + ND AEP P
Sbjct: 1438 AGSEEAKVARETFINGLAKFTLLDTVAEMGPKNVECIRALLAIATEDGDYLGDSWGPVLRYISQLARLLLFAGNLHTDDVFFAENDDGSASTAEPSP 1534
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Match: A0A8J9T0E8_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T0E8_PHATR) HSP 1 Score: 86.7 bits (213), Expect = 6.000e-17 Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 1 GLKKAVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCLALTDGNLLRESWGPVLRCISQLSRLQLFARDLQQD 258
G AVRIA M++AR+T +++L +FT L + + M+ KNV ++ LL +A+ DG+ L ESWGPVL+CISQL+RL+L A L D
Sbjct: 522 GFVYAVRIAAHSKMSLARDTFVSSLAKFTFLGSLKEMKRKNVESIRTLLSIAVIDGDFLNESWGPVLQCISQLARLRLTASGLDSD 607 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig784.19080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig784.19080.1 >prot_F-serratus_M_contig784.19080.1 ID=prot_F-serratus_M_contig784.19080.1|Name=mRNA_F-serratus_M_contig784.19080.1|organism=Fucus serratus male|type=polypeptide|length=148bp GLKKAVRIAGGLDMTMARETLINALVRFTLLETSRHMEDKNVRCVKVLLCback to top mRNA from alignment at F-serratus_M_contig784:13579..16351+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig784.19080.1 ID=mRNA_F-serratus_M_contig784.19080.1|Name=mRNA_F-serratus_M_contig784.19080.1|organism=Fucus serratus male|type=mRNA|length=2773bp|location=Sequence derived from alignment at F-serratus_M_contig784:13579..16351+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig784:13579..16351+ >mRNA_F-serratus_M_contig784.19080.1 ID=mRNA_F-serratus_M_contig784.19080.1|Name=mRNA_F-serratus_M_contig784.19080.1|organism=Fucus serratus male|type=CDS|length=888bp|location=Sequence derived from alignment at F-serratus_M_contig784:13579..16351+ (Fucus serratus male)back to top |