mRNA_F-serratus_M_contig780.19058.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE) HSP 1 Score: 110 bits (276), Expect = 2.480e-26 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 25 CGIANLFSGSSVDGFSAVNPLCIDFLSHTHEIGHNLGCYHNRDNSNTETDYAHGYRYCDGTDPYRTIMSSF---C-------SDPDTPRINWFSN 279
CG+ +F+G++ GFS V C D SHTHEI HN+GCYH+RDNS T+ +Y HGYRYC G+DPYRTIMS + C +DP P++N+FSN
Sbjct: 458 CGLGYIFNGNAEFGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNSETQDEYRHGYRYCTGSDPYRTIMSYYQNGCGGDPTPEADPIVPQVNYFSN 552
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE) HSP 1 Score: 107 bits (266), Expect = 5.510e-25 Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 25 CGIANLFSGSSVDGFSAVNPLCIDFLSHTHEIGHNLGCYHNRDNSNTETDYAHGYRYCDGTDPYRTIMSSF---CS-------DPDTPRINWFSN 279
CG+ +F+G + GFS V+ C D SHTHEI HN+GCYH+++NS+T+ Y HG+RYC+G DPYRTIMS + C DP PR+N+FSN
Sbjct: 278 CGLGYIFNGDAAFGFSLVDSNCFDNFSHTHEIAHNMGCYHDKNNSDTQHAYRHGWRYCEGADPYRTIMSYYHNGCGGDPTSEDDPIVPRVNYFSN 372
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: D8LMP2_ECTSI (Peptidyl-Asp metallopeptidase. metallo peptidase. MEROPS family M72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP2_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 4.220e-17 Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 25 CGIANLFSGSSVDGFSAVNPLCIDFLSHTHEIGHNLGCYHNRDNSNTETDYAHGYRYCDGTDP 213
CG+ +F+G++ GFS V C D SHTHEI HN+GCYH+R NS + + HGYRYC GTDP
Sbjct: 117 CGLGYVFNGNAEYGFSLVGSNCFDNFSHTHEIAHNMGCYHDRLNSGPQDAFRHGYRYCTGTDP 179
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: D8LCC0_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC0_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 8.270e-16 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 64 GFSAVNPLCIDFLSHTHEIGHNLGCYHNRDNSNTETDYAHGYRYCDGTDPYRTIMSSFCSDPDTPRINWFS 276
G+S V+ C+D LSH HEIGHN+G HNR+++++E DYAH RYC G PYRTIM+ PR+ FS
Sbjct: 315 GYSIVHTHCLDNLSHIHEIGHNMGANHNREDTSSEHDYAHAQRYCTGDTPYRTIMAYETGCLQAPRVAMFS 385
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: A0A7S2PP87_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PP87_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.640e-14 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 52 SSVDGFSAVNPLCIDFLSHTHEIGHNLGCYHNRDNSNTETDYAHGYRYCDGTDPYRTIMSSFCSDPDTPRINWFSN 279
S + FS N I + HE+GHN GCYHNR NSNT+ +YAHGY+ D T +RTI++ C++ PR+NW+S+
Sbjct: 56 SKANMFSITNWGYIPGHTFAHELGHNWGCYHNRANSNTQVNYAHGYQSPDET--FRTILAYNCANSYCPRVNWYSS 129
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: A0A7S2LJR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LJR7_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.880e-13 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 52 SSVDGFSAVNPLCIDFLSHTHEIGHNLGCYHNRDNSNTETDYAHGYRYCDGTDPYRTIMSSFCSDPDTPRINWFSN 279
S + FS N I + HE+GHN GCYHNR NSNT+ +YAHGY+ D T +RTI++ C++ PR+NW+S+
Sbjct: 296 SKANMFSITNWGYIPGHTFAHELGHNWGCYHNRANSNTQVNYAHGYQSPDET--FRTILAYNCANSYCPRVNWYSS 369
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: D8LC56_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC56_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 5.980e-11 Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 1
Query: 13 VGFSCGIANLFSGSSVDGFSAVNPLCIDFLSHTHEIGHNLGCYHNRDN---SNTETDYAHGYRYCDGTDPYRTIMSSFCSDPDTPRINWFSN 279
VGF+ G + SG + G+S V+ C+ SH HE+GHN G HN++N S+ Y + YR C+ +RTIM+ P TPR+N FSN
Sbjct: 323 VGFTMGSPS--SGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENAGGSDGVDAYNYAYRNCEVGTKFRTIMAYSSGCPSTPRVNVFSN 412
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: A0A835YK21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK21_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 6.360e-11 Identity = 45/95 (47.37%), Postives = 53/95 (55.79%), Query Frame = 1
Query: 25 CGIANLFSGSSVD----GFSAVNPLCIDFLSHTHEIGHNLGCYHNRDNSNTET--DYAHGYRYC-DGTD--PY-RTIMSSFCSDPDTPRINWFSN 279
CG NL S +S G+S V CI SH HEIGHN+GC HN +NS T Y GYRYC DG PY RTIMS C+ R+ +FS+
Sbjct: 429 CGYGNLLSSASSSFASYGYSVVYSDCIASYSHIHEIGHNMGCQHNVENSGQTTVWPYGDGYRYCNDGVTQAPYFRTIMSYACTG--ATRVPYFSS 521
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: A0A6H5JDN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN0_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 8.230e-11 Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 46 SGSSVDGFSAVNPLCIDFLSHTHEIGHNLGCYHNRDN---SNTETDYAHGYRYCDGTDPYRTIMSSFCSDPDTPRINWFSN 279
SG + G+S V+ C+ SH HE+GHN G HN++N S Y + YR CD +RTIM+ P TPR+N FSN
Sbjct: 324 SGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENVGGSGGVDAYNYAYRNCDVGTKFRTIMAYSSGCPSTPRVNVFSN 404
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI) HSP 1 Score: 65.5 bits (158), Expect = 1.990e-10 Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 25 CGIANLFSGSSVDGFSAVNPLCIDFLSHTHEIGHNLGCYHNRDNSNTE-TDYAHGYRYCDG 204
CG +F+ + GFS ++ +C + THEIGHNLGC H+RDNSNT T Y HG RYC G
Sbjct: 324 CGRGWIFNFNEALGFSLMDSICFSNWTQTHEIGHNLGCRHDRDNSNTGMTAYGHGLRYCTG 384 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig780.19058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig780.19058.1 >prot_F-serratus_M_contig780.19058.1 ID=prot_F-serratus_M_contig780.19058.1|Name=mRNA_F-serratus_M_contig780.19058.1|organism=Fucus serratus male|type=polypeptide|length=93bp MAGNVGFSCGIANLFSGSSVDGFSAVNPLCIDFLSHTHEIGHNLGCYHNRback to top mRNA from alignment at F-serratus_M_contig780:4674..5659- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig780.19058.1 ID=mRNA_F-serratus_M_contig780.19058.1|Name=mRNA_F-serratus_M_contig780.19058.1|organism=Fucus serratus male|type=mRNA|length=986bp|location=Sequence derived from alignment at F-serratus_M_contig780:4674..5659- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig780:4674..5659- >mRNA_F-serratus_M_contig780.19058.1 ID=mRNA_F-serratus_M_contig780.19058.1|Name=mRNA_F-serratus_M_contig780.19058.1|organism=Fucus serratus male|type=CDS|length=558bp|location=Sequence derived from alignment at F-serratus_M_contig780:4674..5659- (Fucus serratus male)back to top |