mRNA_F-serratus_M_contig78.19053.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: D8LPM3_ECTSI (Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM3_ECTSI) HSP 1 Score: 493 bits (1270), Expect = 3.070e-169 Identity = 238/326 (73.01%), Postives = 287/326 (88.04%), Query Frame = 2
Query: 248 KVQSIAQDLRGKHFIVTGANTGIGYATARELAKMGAKVTLACRSAERGKEAIEKLRVEALAKQVDEGVDLIDGLEDVDVQLEIVDLGSLRSVVAFAKRFKESGSNVDVLINNAGIMALPERKETVDGLEMQIGVNHFGGHLLTRLMEPMIVEGGRILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINTYAIHPGVVDTELVRNMTDNSLMSRVVRMLAPFSKFLLLTPLTGALTTLKCAIDPAIAGPEFSGKYWTSMTEKQPSALASNPANPPRYWDLTENILETKLGKKVDELL 1225
K +S+ QDLRGKHF+VTGANTG+GYAT RELAKMGA VTLACRSAERG++AI+K++ EAL K V EGVDL++GL DVDV+LE++DLGSL+SV+AFA+RFK SG+ VDVLINNAGIMA+PER+ETVDGLEMQIGVNHFGGHLLTRLMEP++ +GGR++F SS HRQ P TLD+DNVN+EKPDTYN+WMAYGRSKLANI DAKEFA RL R I+TYA HPG+V+TEL+RNMTD+SLMSRV R+ AP S+F+L TPLTGALTT++CA+DP++AGPEFSGKYW +M E+ PS LA +PANPPR W++TE++LE KLGK VD+LL
Sbjct: 10 KAKSVCQDLRGKHFVVTGANTGLGYATTRELAKMGAAVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLEGLTDVDVRLEVLDLGSLQSVIAFAQRFKASGTKVDVLINNAGIMAIPERRETVDGLEMQIGVNHFGGHLLTRLMEPLMNDGGRVIFLSSLGHRQPPGQAKVTLDFDNVNYEKPDTYNSWMAYGRSKLANILDAKEFAKRLEARGISTYACHPGIVNTELMRNMTDSSLMSRVTRLTAPLSRFILATPLTGALTTIRCAVDPSLAGPEFSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEAKLGKNVDDLL 335
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: D8LP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP30_ECTSI) HSP 1 Score: 435 bits (1119), Expect = 3.370e-144 Identity = 218/330 (66.06%), Postives = 267/330 (80.91%), Query Frame = 2
Query: 239 ATKKVQSIAQDLRGKHFIVTGANTGIGYATARELAKMGAKVTLACRSAERGKEAIEKLRVEALAKQVDEGVDLIDGLEDVDVQLEIVDLGSLRSVVAFAKRFKESGSNVDVLINNAGIMALPERKETVDGLEMQIGVNHFGGHLLTRLMEPMIVEGGRILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINTYAIHPGVVDTELVRNMTDNSLMSRVVRM-LAPFSKFLLLTPLTGALTTLKCAIDPAIAGPEFSGKYWTSMTEKQPSALASNPANPPRYWDLTENILETKLGKKVDELL 1225
AT+K +S+ QDLRGKHFIVTGANTG+GY TARELAKMGAKVTLACRSAERG++AI+K++ EAL K V EGVDL+DGL +VDV+LE++DLGSL+SVVAFA+RFK SG+ VDVL+NNAGI +P R+ET DGLEMQIGVNHFGGHLLTRLMEP + +GGR+LF SS AH + P MP TT DWDNVNF+KP TY+ AY RSKLANI+DAKEFA RL+ R INTYA+ PG+V TE+ R + LM +V L PL GALTT++CA+DP++AGPE SGKYW +M E+ PS LA +PANPPR W++TE++LE KLGK+VD+++
Sbjct: 156 ATRKAKSLRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLDGLTEVDVRLEVLDLGSLQSVVAFAQRFKASGTKVDVLVNNAGIFGVPNRRETADGLEMQIGVNHFGGHLLTRLMEPSMNDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLMMPIVNAGYVALGWVWLKGPLDGALTTVRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEEKLGKRVDDVV 485
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: A0A6H5JP92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP92_9PHAE) HSP 1 Score: 428 bits (1100), Expect = 1.640e-143 Identity = 214/329 (65.05%), Postives = 261/329 (79.33%), Query Frame = 2
Query: 239 ATKKVQSIAQDLRGKHFIVTGANTGIGYATARELAKMGAKVTLACRSAERGKEAIEKLRVEALAKQVDEGVDLIDGLEDVDVQLEIVDLGSLRSVVAFAKRFKESGSNVDVLINNAGIMALPERKETVDGLEMQIGVNHFGGHLLTRLMEPMIVEGGRILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINTYAIHPGVVDTELVRNMTDNSLMSRVVRM-LAPFSKFLLLTPLTGALTTLKCAIDPAIAGPEFSGKYWTSMTEKQPSALASNPANPPRYWDLTENILETKLGKKVDEL 1222
AT+K +S+ QDLRGKHFIVTGANTG+GY TARELAKMGAKVTLACRSAERG++AI+KL+ E L K EGVDL+DGL +VDV+LE++DLGSLRSV+AFA+ FK SG+ VDVL+NNAGI +P R+ET DGLEM IGVNHFGGHLLTRLMEP I +GGR+LF SS H + P MP TT DWDN+NF+KP TY+ AY RSKLANI+DAKEFA RL+ R INTYA+ PG+V TE+ R + L+ +V A L PL GALTT++CA+DP +AGPE SGKYW +M E+ PS LA +PANPPR W++TE++LE KLGK+VD++
Sbjct: 9 ATRKAKSLRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKLKAEVLEKPAKEGVDLLDGLTEVDVRLEVLDLGSLRSVIAFAQGFKASGTKVDVLVNNAGIFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPSINDGGRVLFLSSLTHSRPPGMPKTTWDWDNMNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYAALGWVWLKGPLDGALTTIRCAVDPCLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEDKLGKRVDDV 337
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: D7FTL4_ECTSI (Similar to Retinol dehydrogenase 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL4_ECTSI) HSP 1 Score: 280 bits (717), Expect = 6.090e-88 Identity = 135/211 (63.98%), Postives = 166/211 (78.67%), Query Frame = 2
Query: 593 MALPERKETVDGLEMQIGVNHFGGHLLTRLMEPMIVEGGRILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINTYAIHPGVVDTELVRNMTDNSLMSRVVRMLAPFSKFLLLTPLTGALTTLKCAIDPAIAGPEFSGKYWTSMTEKQPSALASNPANPPRYWDLTENILETKLGKKVDELL 1225
MA+P + TVDGLE QIGVNHFG HLLTRLME I++GGR++F SS AH+ DWDNVN+ KP+ Y +AYGRSKLAN+ DAK FA LSDR+INTYA+HPGVV+T+L RN+TD L+SRV R+ F+L +PLTG+LTTL+CAIDPA+AGPEFSGKYW+ M + QPSALAS+PANPPR W++TE +LETKLGKK++ LL
Sbjct: 1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKH------GGWDWDNVNYTKPNKYVPMIAYGRSKLANVLDAKAFAGHLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVAKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVQPSALASDPANPPRLWEITEELLETKLGKKIENLL 205
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: A0A6H5JGN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN4_9PHAE) HSP 1 Score: 219 bits (558), Expect = 2.180e-64 Identity = 109/178 (61.24%), Postives = 138/178 (77.53%), Query Frame = 2
Query: 446 GVDLIDGLEDVDVQLEIVDLGSLRSVVAFAKRFKESGSNVDVLINNAGIMALPERKETVDGLEMQIGVNHFGGHLLTRLMEPMIVEGGRILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINTYAIHPGVVDTELVRNMTDNSLMSRV 979
GVDL++GL DVDVQ+E++DLG L+SVV+FA+R K SG +DVLI+NAGIMA+P K +VDGLE QIGVNHF HLL+RLM I++GGR++F SS AH+ DWDNVN+ KP+ + +AYGRSKLAN+ DAK FA LSDR+INTYA+HPGVV+T+L RN TD L+SR+
Sbjct: 29 GVDLLEGLSDVDVQVEVLDLGVLQSVVSFAQRLKSSGQKIDVLIDNAGIMAIPTEKRSVDGLEKQIGVNHFVTHLLSRLMGKQIIDGGRVVFFSSVAHKH------GGCDWDNVNYTKPNEHGPMIAYGRSKLANVLDAKGFAGHLSDRRINTYALHPGVVNTDLFRNATDGRLISRM 200
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: A0A433SZU2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SZU2_ELYCH) HSP 1 Score: 207 bits (526), Expect = 4.710e-58 Identity = 125/314 (39.81%), Postives = 181/314 (57.64%), Query Frame = 2
Query: 266 QDLRGKHFIVTGANTGIGYATARELAKMGAKVTLACRSAERGKEAIEKLRVEALAKQVDEGVDLIDGLEDVDVQLEIVDLGSLRSVVAFAKRFKESGSNVDVLINNAGIMALPERKETVDGLEMQIGVNHFGGHLLTRLMEPMI--VEGGRILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINTYAIHPGVVDTELVRNMTDNSLMSRVVRMLAPFSKFLLLTPLTGALTTLKCAIDPAIAGPEFSGKYWTSMTEKQPSALASNPANPPRYWDLTENILETKL 1201
+ L K ++TGANTG+G TAR+LAK G ++ +ACR+ E+G EA K++ ++ ++ DV ++ +DL S S+ FAK+F E+ + +D+LINNAG+MA P+ T DGLEMQIG NHFG LLT L+ + RI+ SS AH ++ WD++N +K Y +W AYG+SKLANI E + RL + ++HPG V+T+L R+ + ++L P SK TP+ GA TTL CA+ P + E SGKY+ EK PS + A+ R W+LTE I++ KL
Sbjct: 9 ETLELKTVLITGANTGLGKETARDLAKRGGRIIMACRNLEKG---------EATRKEI------VEETKNEDVVVQELDLASFESIQNFAKKFNETETRLDILINNAGVMACPKTL-TKDGLEMQIGTNHFGHFLLTNLLLDKLKACSPSRIVILSSMAHA------FASIKWDDINSDKK--YGDWAAYGQSKLANILHCLELSNRLKGTGVTVNSVHPGGVNTDLQRHTNRG-----IFKLLKPLSKLFFKTPVDGAQTTLYCALSPDLE--EVSGKYFVDCKEKAPSRRGQSEADAKRLWELTEEIIQQKL 291
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: A0A553N7Y6_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553N7Y6_TIGCA) HSP 1 Score: 200 bits (508), Expect = 1.980e-55 Identity = 128/317 (40.38%), Postives = 181/317 (57.10%), Query Frame = 2
Query: 272 LRGKHFIVTGANTGIGYATARELAKMGAKVTLACRSAERGKEAIEKLRVEALAKQVDEGVDLIDGLEDVDVQLEI--VDLGSLRSVVAFAKRFKESGSNVDVLINNAGIMALPERKETVDGLEMQIGVNHFGGHLLTRLMEPMIVEGG------RILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINTYAIHPGVVDTELVRNMTDNSLMSRVVRMLAPFSKFLLLTPLTGALTTLKCAIDPAIAGPEFSGKYWTSMTEKQPSALASNPANPPRYWDLTENILETK 1198
L GK ++TGANTGIG ATA +LAK GA+V + CRS E+G EA +++ E+ Q+E+ +DL SL+SV A+ S +D+LINNAG+M P K T DG +MQ G NH G LLT ++ P+I + RI+ SS AH+ P ++WD++N+EK +Y+ AY +SKLAN+ AKE A RLSD +I+ YA+HPG VDTEL R+ N +++ + P + L P+ GA TTL CA+D ++A SGKY+ E +P + A + R WDL+E + K
Sbjct: 45 LNGKLVVITGANTGIGKATAEDLAKRGARVIILCRSVEKGDEAAAEIK------------------ENTGGQVEVRRLDLASLKSVRECAEALVASEDKIDILINNAGVMLCPHWK-TEDGFDMQFGTNHLGHFLLTEMLMPLIRKSEASGFHPRIIILSSLAHKGAP------INWDDINYEK--SYSAIAAYAQSKLANVLHAKELAERLSDTEISVYAVHPGAVDTELGRHFY-NKWWAKLFK---PCASRLFKQPIHGAQTTLYCALDDSVAND--SGKYYADCRETRPHSRALRKEDQKRLWDLSEKFVGLK 328
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: A0A3S0Z7Y7_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0Z7Y7_ELYCH) HSP 1 Score: 193 bits (490), Expect = 1.560e-52 Identity = 124/315 (39.37%), Postives = 176/315 (55.87%), Query Frame = 2
Query: 266 QDLRGKHFIVTGANTGIGYATARELAKMGAKVTLACRSAERGKEAIEKLRVEALAKQVDEGVDLIDGLEDVDVQLEIVDLGSLRSVVAFAKRFKESGSNVDVLINNAGIMALPERKETVDGLEMQIGVNHFGGHLLTRLMEPMIVEG--GRILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINTYAIHPGVVDTELVRN--MTDNSLMSRVVRMLAPFSKFLLLTPLTGALTTLKCAIDPAIAGPEFSGKYWTSMTEKQPSALASNPANPPRYWDLTENILETK 1198
+ L GK ++TG NTGIG+ TA++LA+ GA++ +ACR ER + A K++ D + +V + +DL S S+ AF F + + +D+LINNAG+M P R T DGLEMQ+G NHFG LLT L+ + RI+ SS AH + +++D++N EK +Y AY +SKLANI KE RL + YA+HPGVV TEL R+ + +N + ++ + AP LL TPL GA TTL CA++PA SGKY++ EK+PS A + R WD++ I E K
Sbjct: 61 EKLNGKTVVITGCNTGIGFETAKDLAQRGARIIMACRDMERCEAAASKIK---------------DIVNSNNVICKKLDLSSFESIRAFCDEFNRTEARLDILINNAGVMMCP-RMLTKDGLEMQLGTNHFGHFLLTNLLLDKLKASRPSRIVAVSSRAHTRTQG-----INFDDINSEK--SYEKMTAYSQSKLANILHVKELTRRLEGTGVTAYALHPGVVATELPRHIALANNPI---ILFLTAPLRYILLKTPLEGAQTTLACALNPAWE--TISGKYYSDCKEKEPSLPAQDAEAAKRLWDVSVEITEGK 347
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: A0A6J8C7G3_MYTCO (RDH12 n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8C7G3_MYTCO) HSP 1 Score: 190 bits (482), Expect = 1.010e-51 Identity = 125/309 (40.45%), Postives = 182/309 (58.90%), Query Frame = 2
Query: 272 LRGKHFIVTGANTGIGYATARELAKMGAKVTLACRSAERGKEAIEKLRVEALAKQVDEGVDLIDGLEDVDVQLEIVDLGSLRSVVAFAKRFKESGSNVDVLINNAGIMALPERKETVDGLEMQIGVNHFGGHLLTRLM--EPMIVEGGRILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINTYAIHPGVVDTELVRNMTDNSLMSRVVRMLAPFSKFLLLTPLTGALTTLKCAIDPAIAGPEFSGKYWTSMTEKQPSALASNPANPPRYWDLTENILE 1192
L GKH I+TGANTGIG TA +LA GAKVTLACR +R ++A + ++ I G +++ V+ ++L SL+SV +FA+ ++ +DVLINNAGIM P K T DG EMQ GVNH G LLT L+ + I R++ SS AH + +++D++N EK Y+ AY +SKLAN+ + E A +L + TY++HPGV++TEL R++T S RML K+L+ TP GA TT+ CA+D +++ E +GKY++ +K PS A N N R W L+ +++
Sbjct: 46 LDGKHVIITGANTGIGKETAIDLANRGAKVTLACRDMKRAQDAADDIKQ-------------ITGNQNIIVKK--LNLASLKSVRSFAEDINKNEKRIDVLINNAGIMRCPYWK-TDDGFEMQFGVNHLGHFLLTNLLLDKLKISAPSRVVTVSSLAHER------GKMNFDDLNQEK--NYDKGSAYSQSKLANVLFSSELAKKLQGTGVTTYSLHPGVINTELSRHVTQ----SMGWRMLLSVIKYLIKTPNEGAQTTIYCAVDESLS--EETGKYYSDCAKKTPSKEALNDENAKRLWKLSAKMVD 324
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Match: A0A2P6NN59_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NN59_9EUKA) HSP 1 Score: 184 bits (468), Expect = 3.050e-49 Identity = 121/314 (38.54%), Postives = 177/314 (56.37%), Query Frame = 2
Query: 269 DLRGKHFIVTGANTGIGYATARELAKMGAKVTLACRSAERGKEAIEKLRVEALAKQVDEGVDLIDGLEDVDVQLEIVDLGSLRSVVAFAKRFKESGSNVDVLINNAGIMALPERKETVDGLEMQIGVNHFGGHLLTRLMEPMIVEGG--RILFTSSDAHRQLPSMPMTTLDWDNVNFEKPDTYNNWMAYGRSKLANIFDAKEFAARLSDRKINT--YAIHPGVVDTELVRNMTDNSLMSRVVRMLAPFSKFLLLTPLTGALTTLKCAIDPAIAGPEFSGKYWTSMTEKQPSALASNPANPPRYWDLTENILETK 1198
DL+GK I+TGANTGIG TA+E+AKMGA V +A R ER A+EKL+ E+ ++Q++ +QL DL S SV FAK F E + +L+NNAG+MALP+R+ T DGLEMQ+G+NHFG LLT L+ + + RI+ SS+ H+ M ++ +++N EKP +Y W YG SKL+NI A + + K++ +++HPG + TEL RN+ + + R + P L TP GALT++ CA+ P + GKY ++ E +N + W L+E+I K
Sbjct: 82 DLKGKVAIITGANTGIGLITAKEIAKMGAHVIVASRDPERSLAAVEKLKEESGSQQIE------------FLQL---DLASFASVRDFAKAFHEKNLPLHILVNNAGVMALPQRQTTKDGLEMQMGINHFGHFLLTNLLLDDLKKSAPSRIVNVSSEGHK------MAKMNLEDINCEKPGSYGPWRVYGNSKLSNILFAMQLQKQFDQEKVDVSAWSLHPGTIRTELGRNL--EGITGYLNRTIGPL---FLKTPEQGALTSIFCAVRPEAL--QSRGKYMSNCREA--GTWHANEELAEKLWKLSEDITGLK 365 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig78.19053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig78.19053.1 >prot_F-serratus_M_contig78.19053.1 ID=prot_F-serratus_M_contig78.19053.1|Name=mRNA_F-serratus_M_contig78.19053.1|organism=Fucus serratus male|type=polypeptide|length=332bp MATKKVQSIAQDLRGKHFIVTGANTGIGYATARELAKMGAKVTLACRSAEback to top mRNA from alignment at F-serratus_M_contig78:670535..682488- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig78.19053.1 ID=mRNA_F-serratus_M_contig78.19053.1|Name=mRNA_F-serratus_M_contig78.19053.1|organism=Fucus serratus male|type=mRNA|length=11954bp|location=Sequence derived from alignment at F-serratus_M_contig78:670535..682488- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig78:670535..682488- >mRNA_F-serratus_M_contig78.19053.1 ID=mRNA_F-serratus_M_contig78.19053.1|Name=mRNA_F-serratus_M_contig78.19053.1|organism=Fucus serratus male|type=CDS|length=1992bp|location=Sequence derived from alignment at F-serratus_M_contig78:670535..682488- (Fucus serratus male)back to top |