mRNA_F-serratus_M_contig78.19044.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: D8LP25_ECTSI (60S acidic ribosomal protein P0 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP25_ECTSI) HSP 1 Score: 370 bits (949), Expect = 1.300e-126 Identity = 187/242 (77.27%), Postives = 210/242 (86.78%), Query Frame = 1
Query: 22 MDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEITTEVFLVPRGQKVGSSEAALLQTLSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPSAFIA 747
M KIR ALRG AT+LM KNTMIRK+IS + KDNPGHP EL+LP+V+GNVGFIFTNG+L +IR V+E HRVPAPARVGSIAP DV VPP TG P +T+FFQVLQ+PTKITKG+IEITT+VFLVP+GQKVGSSEAALLQ LS+ PFTYGLVI VYD+GSVFDA VLD+TD DM KFA AC N+AAVSLEL FPTLASLPHSI+NAFRALV VVIEGC+ YSF QADT+KAILA+PSAF A
Sbjct: 1 MAKIRYALRGSATVLMGKNTMIRKIISVFLKDNPGHPLELILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSIAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDEDMGNKFAAACGNVAAVSLELGFPTLASLPHSIANAFRALVGVVIEGCDTYSFDQADTIKAILADPSAFAA 242
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: A0A8D0Z1H1_PIG (RL10P_insert domain-containing protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0Z1H1_PIG) HSP 1 Score: 331 bits (848), Expect = 3.750e-110 Identity = 180/285 (63.16%), Postives = 206/285 (72.28%), Query Frame = 1
Query: 1 DNVSSNHMDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEIT---------------------------TEVFLVPRGQKV-GSSEAALLQT--------LSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPSAFIA 747
DNV S+ M KIR ALRG AT+LM KNTMIRK+ISTY KD+PGHP+ELLLPKV+GN+GFIFTNG+L IR V+EEHRVPAPARVGS+APTDVKVPP TG P +T+FFQVLQ+PTKITKG+IEIT F G + G S + Q L++ PFTYGL+I VYD+GSVFDA VLD+TDADM KFA AC+N+AAVSLEL FPTLASLPHSI+NAFRA+V VVIEGC YSF QADTVKAILA+PSAF A
Sbjct: 31 DNVGSSQMAKIRFALRGTATVLMGKNTMIRKIISTYVKDHPGHPFELLLPKVVGNIGFIFTNGELGAIRDVIEEHRVPAPARVGSVAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITFAAACANVAAVSLELGFPTLASLPHSIANAFRAMVGVVIEGCSTYSFAQADTVKAILALNIRPFTYGLMIDCVYDNGSVFDAAVLDLTDADMANKFAAACANVAAVSLELGFPTLASLPHSIANAFRAMVGVVIEGCSTYSFAQADTVKAILADPSAFAA 315
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: A0A835YRE1_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE1_9STRA) HSP 1 Score: 305 bits (782), Expect = 3.790e-101 Identity = 155/245 (63.27%), Postives = 192/245 (78.37%), Query Frame = 1
Query: 1 DNVSSNHMDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEITTEVFLVPRGQKVGSSEAALLQTLSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPS 735
DNV S M +IRLALRG+A +L+ KNTMIRK+++ Y K NPGHPYE L+P+V GNVGFIFTNGDL ++R V+EE+RVPAPARVG++AP DV VPP TG P +T+FFQVLQIPTKI KG+IEIT EV LV +G KVG+SEA LL LS+ PFTYGLVI VYD+GS+F+A VLD+TD D+ +F A N+AA SL L +PTLASLPHSI+NAF+ALVAV ++ C +F QA+ K +L P+
Sbjct: 31 DNVGSRQMAQIRLALRGQAVVLLGKNTMIRKILTNYIKQNPGHPYENLIPRVRGNVGFIFTNGDLGKVREVIEENRVPAPARVGAVAPVDVFVPPGPTGCDPGQTSFFQVLQIPTKIAKGQIEITNEVHLVKKGDKVGNSEAVLLTRLSIRPFTYGLVIELVYDNGSIFEAAVLDLTDDDLRARFVGAVRNVAAASLALGYPTLASLPHSIANAFKALVAVAVQ-CPGVTFAQAEPFKKLLPAPA 274
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: D0NVM9_PHYIT (60S acidic ribosomal protein P0 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NVM9_PHYIT) HSP 1 Score: 305 bits (782), Expect = 9.290e-101 Identity = 156/254 (61.42%), Postives = 195/254 (76.77%), Query Frame = 1
Query: 1 DNVSSNHMDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEITTEVFLVPRGQKVGSSEAALLQTLSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPSAFIAATGGG 762
DNV S M +IRL LRG+A +LM KNT++RKV + + K NPGHP EL +P + GNVGF+FTN DL+EIR V+E +RVPAPARVGSIAP DV VPP TG+ P +T+FFQ LQI TKI KG+IEI TEV L +G+KVG+SEAALLQ L + PF+YGLVI VYD+GS+FD VLD+T+AD+ KF N+AA+SLEL PTLAS+PHSI+NAF+ LVA+ +E CE++SF +A+ KA LA+PSAF A G
Sbjct: 31 DNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFNNFVKKNPGHPLELFIPLLKGNVGFVFTNDDLSEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVMLTRKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAMSLELGIPTLASIPHSIANAFKDLVAIAVE-CEEFSFEKAEPYKAFLADPSAFAVAAPAG 283
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: A0A5D6XUU0_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUU0_9STRA) HSP 1 Score: 303 bits (776), Expect = 7.070e-100 Identity = 156/249 (62.65%), Postives = 191/249 (76.71%), Query Frame = 1
Query: 1 DNVSSNHMDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEITTEVFLVPRGQKVGSSEAALLQTLSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPSAFIA 747
DNV SN + +IRLALR +A LLM KNT+IRKV + Y K NPGHP E LP + GNVGF+FTN DLT++R V+E ++VPAPARVG++AP DV VP TG+ P +T FFQ LQIPTKI KG+IEI EV L +G KVG+SEA LLQ L++ PFTYGLVI SVYD+GS+FD VLD+T+ D+ KF NIAAVSLE+ FPTLAS+PHS++NAF+ LVAVV+E + +SF +AD KA LANPSAF A
Sbjct: 31 DNVGSNQIQQIRLALRNRAELLMGKNTLIRKVFNNYVKKNPGHPLEQFLPLLKGNVGFVFTNEDLTQVREVLEANKVPAPARVGALAPIDVIVPAGPTGADPGQTGFFQALQIPTKIVKGQIEIINEVLLTKKGDKVGNSEAVLLQKLNIRPFTYGLVIQSVYDNGSLFDPAVLDLTEDDLTAKFVAGLRNIAAVSLEIGFPTLASIPHSVANAFKTLVAVVVE-LDSFSFAKADPYKAYLANPSAFAA 278
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: A0A6V2YPM3_HETAK (60S acidic ribosomal protein P0 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2YPM3_HETAK) HSP 1 Score: 303 bits (776), Expect = 7.310e-100 Identity = 156/249 (62.65%), Postives = 197/249 (79.12%), Query Frame = 1
Query: 1 DNVSSNHMDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEITTEVFLVPRGQKVGSSEAALLQTLSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPSAFIA 747
DNV S+ M +IRLALRG+A +LM KNTM+RKVI+ + K NPGHP+E + K+ GNVG +FTNGDL E+R+ +EE+RVPAPARVGSIAP +V VPP TG P +T+FFQVLQI TKI++G+IEI V L+ G KVG+SEAALLQ L + PFTYGLVI S+YD+GS+FDA VLD+TDAD+ KF A S +A+V LE+ +PTLAS+PHSI+NAF+ LVAV +E CE +SF +A+ KA LA+PSAF A
Sbjct: 29 DNVGSHQMQQIRLALRGEAEVLMGKNTMMRKVIAEFMKKNPGHPFEQISAKLRGNVGLVFTNGDLGEVRTKIEENRVPAPARVGSIAPVEVIVPPGPTGCDPGQTSFFQVLQIATKISRGQIEIVAPVSLLSAGDKVGNSEAALLQKLDIKPFTYGLVIDSIYDNGSLFDAKVLDLTDADLQAKFMAAVSKLASVCLEIGYPTLASMPHSIANAFKKLVAVAVE-CETFSFEKAEPYKAYLADPSAFAA 276
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: K3WAY4_GLOUD (60S acidic ribosomal protein P0 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAY4_GLOUD) HSP 1 Score: 302 bits (774), Expect = 1.420e-99 Identity = 151/252 (59.92%), Postives = 194/252 (76.98%), Query Frame = 1
Query: 1 DNVSSNHMDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEITTEVFLVPRGQKVGSSEAALLQTLSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPSAFIAATG 756
DNV SN + +IR++LRG+A +LM KNT+IRKV S Y K NPGHP E ++P + GNVGF+FTN DL +IR V+E ++VPAPARVG++AP DV +PP TG P +T FFQ LQ+ TKI KG+IEI EV L +G+KVG+SEA LLQ L++ PFTYGLVI +VYD+GS+FD VLD+T+ D+ KF N+AAVSLE+ FPTLAS+PHS++NAF+ LVAVV+E + +SF +AD KA LA+PSAF AA G
Sbjct: 31 DNVGSNQIQQIRISLRGRAEILMGKNTLIRKVFSNYIKKNPGHPLEQVIPLLKGNVGFVFTNQDLNQIREVLESNKVPAPARVGAVAPIDVIIPPGPTGCDPGQTAFFQALQVGTKIQKGQIEIINEVLLTKKGEKVGNSEAVLLQKLNIRPFTYGLVIQTVYDNGSIFDPAVLDLTEDDLTAKFVAGLRNVAAVSLEIGFPTLASIPHSVANAFKTLVAVVVE-LDSFSFAKADPYKAYLADPSAFAAAAG 281
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: M4B8B5_HYAAE (60S acidic ribosomal protein P0 n=11 Tax=Peronosporaceae TaxID=4777 RepID=M4B8B5_HYAAE) HSP 1 Score: 302 bits (774), Expect = 1.470e-99 Identity = 154/254 (60.63%), Postives = 194/254 (76.38%), Query Frame = 1
Query: 1 DNVSSNHMDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEITTEVFLVPRGQKVGSSEAALLQTLSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPSAFIAATGGG 762
DNV S M +IRL LRG+ +LM KNT++RKV +++ K NPGHP E +P + GNVGF+FTN DLTEIR V+E +RVPAPARVG+IAP DV VPP TG+ P +T+FFQ LQI TKI KG+IEI +EV L +G+KVG+SEAALLQ L + PF+YGLVI VYD+GS+FD VLD+T+AD+ KF N+AAVSLEL PTLAS+PHSI+NAF+ LVA+ +E CE++SF +A+ KA LA+PSAF A G
Sbjct: 31 DNVGSAQMQQIRLVLRGRGEVLMGKNTLMRKVFNSFVKKNPGHPLENFIPLLKGNVGFVFTNDDLTEIREVLESNRVPAPARVGAIAPVDVVVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVSEVMLTKKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAVSLELGLPTLASIPHSITNAFKDLVAIAVE-CEEFSFEKAEPYKAFLADPSAFAVAAPAG 283
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: F0WLB6_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLB6_9STRA) HSP 1 Score: 301 bits (771), Expect = 4.330e-99 Identity = 151/253 (59.68%), Postives = 196/253 (77.47%), Query Frame = 1
Query: 1 DNVSSNHMDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEITTEVFLVPRGQKVGSSEAALLQTLSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPSAFIAATGG 759
DNV S M +IR +LRG+A +LM KNT++RKV + + NP HP E+++P + GN+GF+FTN DL +IRSV+E +RVPAPARVG++AP DV VPP STG P +T+FFQ LQI TKI KG+IEI +EV L+ G+KVG+SEAALLQ L++ PF+YGLV+ SVYD+GSVFD VLD+T+ D+ KF N+AAVSLE+ PTLAS+PHSI+NAF++LVAV +E CE YSF +A+ KA LA+PSAF A+ G
Sbjct: 31 DNVRSKQMQQIRQSLRGRAEILMGKNTLMRKVFGNFLRKNPNHPLEMVVPLIRGNIGFVFTNDDLNDIRSVLESNRVPAPARVGAVAPADVVVPPGSTGCDPGQTSFFQALQIATKIQKGQIEIVSEVLLIKEGEKVGNSEAALLQKLNINPFSYGLVLVSVYDNGSVFDPAVLDLTEEDLFAKFIAGLRNVAAVSLEIGIPTLASIPHSIANAFKSLVAVAVE-CETYSFEKAEPFKAYLADPSAFAVASSG 282
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Match: A0A0P6IAI3_9CRUS (60S acidic ribosomal protein P0 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6IAI3_9CRUS) HSP 1 Score: 301 bits (770), Expect = 5.930e-99 Identity = 152/252 (60.32%), Postives = 193/252 (76.59%), Query Frame = 1
Query: 1 DNVSSNHMDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGFIFTNGDLTEIRSVVEEHRVPAPARVGSIAPTDVKVPPSSTGSGPVETTFFQVLQIPTKITKGKIEITTEVFLVPRGQKVGSSEAALLQTLSMLPFTYGLVISSVYDSGSVFDAVVLDITDADMVRKFANACSNIAAVSLELDFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKAILANPSAFIAATG 756
DNV S+ M +IRL LRG+A LLM KNT++RKV S + K NPGHP E +P + GNVGF+FTN DL +IR VVE ++VPAPARVG+IAP DV +P TG P +T+FFQ L I TKI KG+IEI T+V +V +G+KVG+SEAALLQ L++ PF YGLVIS VYD+GS+FD VLD+T+ D+ KFA N+AA+SLE+ FPTLAS+PHS++NAF+ LVA+ +E CE +SF +AD KA LA+PSAF A G
Sbjct: 31 DNVGSHQMQQIRLELRGRAELLMGKNTLMRKVFSNFIKKNPGHPLENFIPLLKGNVGFVFTNADLNQIREVVEGNKVPAPARVGAIAPVDVIIPAGPTGCDPGQTSFFQTLSIGTKIAKGQIEIVTDVLMVKQGEKVGNSEAALLQKLNIRPFAYGLVISQVYDNGSLFDPAVLDLTEDDLCAKFAAGLRNVAAISLEIGFPTLASIPHSVANAFKTLVAIAVE-CETFSFKKADPFKAYLADPSAFAVAAG 281 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig78.19044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig78.19044.1 >prot_F-serratus_M_contig78.19044.1 ID=prot_F-serratus_M_contig78.19044.1|Name=mRNA_F-serratus_M_contig78.19044.1|organism=Fucus serratus male|type=polypeptide|length=259bp MDKIRLALRGKATLLMRKNTMIRKVISTYCKDNPGHPYELLLPKVIGNVGback to top mRNA from alignment at F-serratus_M_contig78:149237..151039- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig78.19044.1 ID=mRNA_F-serratus_M_contig78.19044.1|Name=mRNA_F-serratus_M_contig78.19044.1|organism=Fucus serratus male|type=mRNA|length=1803bp|location=Sequence derived from alignment at F-serratus_M_contig78:149237..151039- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig78:149237..151039- >mRNA_F-serratus_M_contig78.19044.1 ID=mRNA_F-serratus_M_contig78.19044.1|Name=mRNA_F-serratus_M_contig78.19044.1|organism=Fucus serratus male|type=CDS|length=1554bp|location=Sequence derived from alignment at F-serratus_M_contig78:149237..151039- (Fucus serratus male)back to top |