mRNA_F-serratus_M_contig78.19042.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig78.19042.1
Unique NamemRNA_F-serratus_M_contig78.19042.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: A0A8D0Z1H1_PIG (RL10P_insert domain-containing protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0Z1H1_PIG)

HSP 1 Score: 439 bits (1129), Expect = 1.570e-149
Identity = 265/362 (73.20%), Postives = 283/362 (78.18%), Query Frame = 3
Query:    3 MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEIT--------------------------------TQVFLVAKGQKVGSSEAALLQK----LSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPSAFIAATGXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMSMFGEEEGG-GDY 977
            MPLSP+RKTWYFERLK LLD HTKIFLV  DNVGS+QMAKIRF+LRG AT+LMGKNTMIRKIISTY KD+PGHP+ELLLPKVVGN+GFIFTNG+L  IR V+EEHRVPAPARVGS+APTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEIT                                  V +V +G    S   A   K    L+IRPFTYGL+I  VYD GSVFDAAVLD+TDADM  KFA ACAN+AAVSLELGFPTLASLPHSI+NAFRA+V VVIEGC  YSF QADTVK ILADPSAF AA  XXXXXXXXXXXXXXXXXXXXXXX VDMGG   MFGEEE G GDY
Sbjct:    1 MPLSPERKTWYFERLKGLLDNHTKIFLVQADNVGSSQMAKIRFALRGTATVLMGKNTMIRKIISTYVKDHPGHPFELLLPKVVGNIGFIFTNGELGAIRDVIEEHRVPAPARVGSVAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITFAAACANVAAVSLELGFPTLASLPHSIANAFRAMVGVVIEGCSTYSFAQADTVKAILALNIRPFTYGLMIDCVYDNGSVFDAAVLDLTDADMANKFAAACANVAAVSLELGFPTLASLPHSIANAFRAMVGVVIEGCSTYSFAQADTVKAILADPSAF-AAXXXXXXXXXXXXXXXXXXXXXXXXXEVDMGGAGGMFGEEEAGDGDY 361          
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: D8LP25_ECTSI (60S acidic ribosomal protein P0 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP25_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 6.570e-147
Identity = 243/288 (84.38%), Postives = 259/288 (89.93%), Query Frame = 3
Query:  114 MAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPSAFIAATGXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMSMFGEEEGGGDY 977
            MAKIR++LRG AT+LMGKNTMIRKIIS + KDNPGHP EL+LP+VVGNVGFIFTNG+L +IR V+E HRVPAPARVGSIAP DV VPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLV KGQKVGSSEAALLQKLSIRPFTYGLVI  VYD GSVFDAAVLD+TD DM  KFA AC N+AAVSLELGFPTLASLPHSI+NAFRALV VVIEGC+ YSF QADT+K ILADPSAF A+  XXXXXXXXXXXXXXXXXXXXX   +DMGGGMSMFG EEGGGDY
Sbjct:    1 MAKIRYALRGSATVLMGKNTMIRKIISVFLKDNPGHPLELILPRVVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSIAPIDVMVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVYDNGSVFDAAVLDLTDEDMGNKFAAACGNVAAVSLELGFPTLASLPHSIANAFRALVGVVIEGCDTYSFDQADTIKAILADPSAFAASXXXXXXXXXXXXXXXXXXXXXXX---IDMGGGMSMFGAEEGGGDY 285          
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: A0A835YRE1_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE1_9STRA)

HSP 1 Score: 384 bits (987), Expect = 4.400e-129
Identity = 188/275 (68.36%), Postives = 229/275 (83.27%), Query Frame = 3
Query:    3 MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPS 827
            MPLS +RK WYF+RL+ELL +++KI LV CDNVGS QMA+IR +LRG+A +L+GKNTMIRKI++ Y K NPGHPYE L+P+V GNVGFIFTNGDL ++R V+EE+RVPAPARVG++AP DV VPPGPTGCDPGQTSFFQVLQ+PTKI KGQIEIT +V LV KG KVG+SEA LL +LSIRPFTYGLVI  VYD GS+F+AAVLD+TD D+  +F  A  N+AA SL LG+PTLASLPHSI+NAF+ALVAV ++ C   +F QA+  K++L  P+
Sbjct:    1 MPLSAERKEWYFKRLEELLGSYSKILLVQCDNVGSRQMAQIRLALRGQAVVLLGKNTMIRKILTNYIKQNPGHPYENLIPRVRGNVGFIFTNGDLGKVREVIEENRVPAPARVGAVAPVDVFVPPGPTGCDPGQTSFFQVLQIPTKIAKGQIEITNEVHLVKKGDKVGNSEAVLLTRLSIRPFTYGLVIELVYDNGSIFEAAVLDLTDDDLRARFVGAVRNVAAASLALGYPTLASLPHSIANAFKALVAVAVQ-CPGVTFAQAEPFKKLLPAPA 274          
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: D0NVM9_PHYIT (60S acidic ribosomal protein P0 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NVM9_PHYIT)

HSP 1 Score: 374 bits (959), Expect = 1.950e-124
Identity = 213/324 (65.74%), Postives = 254/324 (78.40%), Query Frame = 3
Query:    3 MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPSAFIAATGXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMSMFGEEEGGGD 974
            M LS +RK  YF++L+ LL+ +TKIFLV  DNVGS QM +IR  LRG+A +LMGKNT++RK+ + + K NPGHP EL +P + GNVGF+FTN DL+EIR V+E +RVPAPARVGSIAP DV VPPGPTG DPGQTSFFQ LQ+ TKI KGQIEI T+V L  KG+KVG+SEAALLQKL I+PF+YGLVI  VYD GS+FD AVLD+T+AD+  KF     N+AA+SLELG PTLAS+PHSI+NAF+ LVA+ +E CE++SF +A+  K  LADPSAF  A        XXXXXXXXXXXXXXXXXXVDMGGGM MFG    GGD
Sbjct:    1 MGLSQERKLEYFDKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFNNFVKKNPGHPLELFIPLLKGNVGFVFTNDDLSEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVMLTRKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAMSLELGIPTLASIPHSIANAFKDLVAIAVE-CEEFSFEKAEPYKAFLADPSAFAVAA----PAGXXXXXXXXXXXXXXXXXXVDMGGGMDMFG----GGD 315          
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: K3WAY4_GLOUD (60S acidic ribosomal protein P0 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAY4_GLOUD)

HSP 1 Score: 372 bits (955), Expect = 7.310e-124
Identity = 184/282 (65.25%), Postives = 225/282 (79.79%), Query Frame = 3
Query:    3 MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPSAFIAATG 848
            M LS +RK  YF +L+ LLD +TKIFLV  DNVGSNQ+ +IR SLRG+A +LMGKNT+IRK+ S Y K NPGHP E ++P + GNVGF+FTN DL +IR V+E ++VPAPARVG++AP DV +PPGPTGCDPGQT+FFQ LQV TKI KGQIEI  +V L  KG+KVG+SEA LLQKL+IRPFTYGLVI +VYD GS+FD AVLD+T+ D+  KF     N+AAVSLE+GFPTLAS+PHS++NAF+ LVAVV+E  + +SF +AD  K  LADPSAF AA G
Sbjct:    1 MGLSQERKQEYFSKLENLLDNYTKIFLVGVDNVGSNQIQQIRISLRGRAEILMGKNTLIRKVFSNYIKKNPGHPLEQVIPLLKGNVGFVFTNQDLNQIREVLESNKVPAPARVGAVAPIDVIIPPGPTGCDPGQTAFFQALQVGTKIQKGQIEIINEVLLTKKGEKVGNSEAVLLQKLNIRPFTYGLVIQTVYDNGSIFDPAVLDLTEDDLTAKFVAGLRNVAAVSLEIGFPTLASIPHSVANAFKTLVAVVVE-LDSFSFAKADPYKAYLADPSAFAAAAG 281          
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: M4B8B5_HYAAE (60S acidic ribosomal protein P0 n=11 Tax=Peronosporaceae TaxID=4777 RepID=M4B8B5_HYAAE)

HSP 1 Score: 370 bits (950), Expect = 4.320e-123
Identity = 210/320 (65.62%), Postives = 252/320 (78.75%), Query Frame = 3
Query:    3 MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPSAFIAATGXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMSMFGEEE 962
            M LS +RK  YF +L+ LL+ +TKIFLV  DNVGS QM +IR  LRG+  +LMGKNT++RK+ +++ K NPGHP E  +P + GNVGF+FTN DLTEIR V+E +RVPAPARVG+IAP DV VPPGPTG DPGQTSFFQ LQ+ TKI KGQIEI ++V L  KG+KVG+SEAALLQKL I+PF+YGLVI  VYD GS+FD AVLD+T+AD+  KF     N+AAVSLELG PTLAS+PHSI+NAF+ LVA+ +E CE++SF +A+  K  LADPSAF  A       XXXXXXXXXXXXXXXXXXXVDMGGGM MFG E+
Sbjct:    1 MGLSQERKLEYFGKLETLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRGEVLMGKNTLMRKVFNSFVKKNPGHPLENFIPLLKGNVGFVFTNDDLTEIREVLESNRVPAPARVGAIAPVDVVVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVSEVMLTKKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAVSLELGLPTLASIPHSITNAFKDLVAIAVE-CEEFSFEKAEPYKAFLADPSAFAVAA---PAGXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGAED 316          
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: A0A0P6IAI3_9CRUS (60S acidic ribosomal protein P0 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6IAI3_9CRUS)

HSP 1 Score: 369 bits (946), Expect = 1.740e-122
Identity = 191/325 (58.77%), Postives = 233/325 (71.69%), Query Frame = 3
Query:    3 MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPSAFIAATGXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMSMFGEEEGGGDY 977
            M LS +RK  YF +L+ LL+  TKIFLV+ DNVGS+QM +IR  LRG+A LLMGKNT++RK+ S + K NPGHP E  +P + GNVGF+FTN DL +IR VVE ++VPAPARVG+IAP DV +P GPTGCDPGQTSFFQ L + TKI KGQIEI T V +V +G+KVG+SEAALLQKL+IRPF YGLVIS VYD GS+FD AVLD+T+ D+  KFA    N+AA+SLE+GFPTLAS+PHS++NAF+ LVA+ +E CE +SF +AD  K  LADPSAF  A G                         D+GG   MFG   GG DY
Sbjct:    1 MGLSQERKLEYFTKLETLLENFTKIFLVNVDNVGSHQMQQIRLELRGRAELLMGKNTLMRKVFSNFIKKNPGHPLENFIPLLKGNVGFVFTNADLNQIREVVEGNKVPAPARVGAIAPVDVIIPAGPTGCDPGQTSFFQTLSIGTKIAKGQIEIVTDVLMVKQGEKVGNSEAALLQKLNIRPFAYGLVISQVYDNGSLFDPAVLDLTEDDLCAKFAAGLRNVAAISLEIGFPTLASIPHSVANAFKTLVAIAVE-CETFSFKKADPFKAYLADPSAFAVAAGPAAGADAGAAKVEEVEEEEE----ADIGGATDMFG---GGSDY 317          
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: F0WLB6_9STRA (60S acidic ribosomal protein P0 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLB6_9STRA)

HSP 1 Score: 365 bits (936), Expect = 5.850e-121
Identity = 185/320 (57.81%), Postives = 235/320 (73.44%), Query Frame = 3
Query:    3 MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPSAFIAATGXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMSMFGEEE 962
            M LS +RK  YF RL+ LL+T TKIFLV  DNV S QM +IR SLRG+A +LMGKNT++RK+   + + NP HP E+++P + GN+GF+FTN DL +IR+V+E +RVPAPARVG++AP DV VPPG TGCDPGQTSFFQ LQ+ TKI KGQIEI ++V L+ +G+KVG+SEAALLQKL+I PF+YGLV+ SVYD GSVFD AVLD+T+ D+  KF     N+AAVSLE+G PTLAS+PHSI+NAF++LVAV +E CE YSF +A+  K  LADPSAF  A+                         +D+GGGM MFG ++
Sbjct:    1 MGLSAERKQEYFVRLESLLETFTKIFLVSVDNVRSKQMQQIRQSLRGRAEILMGKNTLMRKVFGNFLRKNPNHPLEMVVPLIRGNIGFVFTNDDLNDIRSVLESNRVPAPARVGAVAPADVVVPPGSTGCDPGQTSFFQALQIATKIQKGQIEIVSEVLLIKEGEKVGNSEAALLQKLNINPFSYGLVLVSVYDNGSVFDPAVLDLTEEDLFAKFIAGLRNVAAVSLEIGIPTLASIPHSIANAFKSLVAVAVE-CETYSFEKAEPFKAYLADPSAFAVASSGQIEAGKDKKEEKAEVEEEE----MDLGGGMDMFGADD 315          
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: A0A8J2WUI9_9STRA (60S acidic ribosomal protein P0 n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WUI9_9STRA)

HSP 1 Score: 363 bits (932), Expect = 2.610e-120
Identity = 201/325 (61.85%), Postives = 253/325 (77.85%), Query Frame = 3
Query:    3 MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPSAFIAATGXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMSMFGEEEGGGDY 977
            M LS +RK  YF +++ LLD +++IF+V CDNVGS Q  +IR +LRG+A +LMGKNTM+RK++S Y   NPGHPYE+LLPK++GN+GF+FTNGDL ++R ++E++RVPAPARVG+IAP DV VPPGPT CDPGQT+FFQ LQ+ TKI KG+IEIT+ V L+  G KVG+SEA LLQKL I PF YGLVI+ VYD GS+FD  VLD+TD D+  KF NA   I++V L+  +P++ S PHSI+  F+ LVA+ +E CE YSF +A   K  LADPSAF++A+  XXXXXXXXXXXXXXXXXXXX    DMGGGM MFG + GG DY
Sbjct:    1 MGLSRERKQEYFGKMEGLLDAYSRIFIVSCDNVGSKQFQQIRMALRGEAVVLMGKNTMMRKVVSAYLAKNPGHPYEMLLPKIMGNIGFVFTNGDLGKVRELIEDNRVPAPARVGAIAPIDVVVPPGPTDCDPGQTNFFQTLQIATKIVKGRIEITSPVNLLKAGDKVGNSEAVLLQKLHINPFDYGLVITDVYDNGSIFDVKVLDLTDDDLFFKFGNALGAISSVCLQTSYPSICSAPHSIATCFKTLVAIAVE-CEGYSFGKAGPFKAYLADPSAFVSASDGXXXXXXXXXXXXXXXXXXXX---XDMGGGMDMFGGDGGGDDY 321          
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Match: A0A7S3JTR3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTR3_9STRA)

HSP 1 Score: 363 bits (933), Expect = 3.290e-120
Identity = 207/335 (61.79%), Postives = 258/335 (77.01%), Query Frame = 3
Query:    3 MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKATLLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRTVVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKGQIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFDAAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVAVVIEGCEKYSFPQADTVKEILADPSAFIAATGXXXXXXXXXXXXXXXXXXXXXXXX------------VDMGGGMSMFGEEEGGG 971
            M LS ++K  YF +++ELL+ ++KIF+V CDNVGS Q  +IR +LRGKA +LMGKNTM+RK+I+ Y   NPGHPYE LLPK+ GN+G +FTNGDL EIR V+  +RVPAPARVG+IAP  V VPPGPT CDPGQT+FFQ LQ+ TKI KG+IEI + V L+  GQKVG+SEA LL+KL I+PF YGLVI  VYD GS+FD  VLDI++ D++ KF +A +  AA+SL +G+PTLAS+PHSI+NAF+A+VA+V+E C KYSF +AD  K  ++DP AF A  G  XXXXXXXXXXXXXXXXXXXXXX            +DMGGGM MFG+ +GGG
Sbjct:    1 MGLSHEKKRDYFAKMEELLENYSKIFIVHCDNVGSKQFQQIRMALRGKAIVLMGKNTMMRKVINMYLSKNPGHPYEFLLPKIHGNIGCVFTNGDLAEIRDVITANRVPAPARVGAIAPVQVIVPPGPTDCDPGQTNFFQTLQIATKIVKGKIEIVSPVNLLEPGQKVGNSEAVLLEKLGIKPFDYGLVIREVYDSGSIFDVKVLDISEDDLIAKFGHAISEFAALSLSIGYPTLASVPHSIANAFKAMVALVVE-CPKYSFEKADPFKLFVSDPEAFKAKYGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGDGDGGG 334          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig78.19042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D0Z1H1_PIG1.570e-14973.20RL10P_insert domain-containing protein n=1 Tax=Sus... [more]
D8LP25_ECTSI6.570e-14784.3860S acidic ribosomal protein P0 n=1 Tax=Ectocarpus... [more]
A0A835YRE1_9STRA4.400e-12968.3660S acidic ribosomal protein P0 n=1 Tax=Tribonema ... [more]
D0NVM9_PHYIT1.950e-12465.7460S acidic ribosomal protein P0 n=16 Tax=Peronospo... [more]
K3WAY4_GLOUD7.310e-12465.2560S acidic ribosomal protein P0 n=1 Tax=Globispora... [more]
M4B8B5_HYAAE4.320e-12365.6360S acidic ribosomal protein P0 n=11 Tax=Peronospo... [more]
A0A0P6IAI3_9CRUS1.740e-12258.7760S acidic ribosomal protein P0 n=1 Tax=Daphnia ma... [more]
F0WLB6_9STRA5.850e-12157.8160S acidic ribosomal protein P0 n=1 Tax=Albugo lai... [more]
A0A8J2WUI9_9STRA2.610e-12061.8560S acidic ribosomal protein P0 n=2 Tax=Pelagomona... [more]
A0A7S3JTR3_9STRA3.290e-12061.79Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig78contigF-serratus_M_contig78:102980..107255 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score430.6
Seed ortholog evalue6.4e-118
Seed eggNOG ortholog2880.D8LP25
Preferred nameRPP0
KEGG koko:K02941
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009409,GO:0009506,GO:0009507,GO:0009536,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030054,GO:0031974,GO:0031981,GO:0032991,GO:0034059,GO:0036293,GO:0042221,GO:0042788,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0055044,GO:0070013,GO:0070482,GO:0071944,GO:1990904
EggNOG free text desc.ribosome biogenesis
EggNOG OGsCOG0244@1,KOG0815@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons6
Model size1408
Cds size978
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig78.19042.1prot_F-serratus_M_contig78.19042.1Fucus serratus malepolypeptideF-serratus_M_contig78 103408..107253 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932322.4243245-UTR-F-serratus_M_contig78:102979..1034071622932322.4243245-UTR-F-serratus_M_contig78:102979..103407Fucus serratus maleUTRF-serratus_M_contig78 102980..103407 -
1690964252.7326114-UTR-F-serratus_M_contig78:102979..1034071690964252.7326114-UTR-F-serratus_M_contig78:102979..103407Fucus serratus maleUTRF-serratus_M_contig78 102980..103407 -
1622932322.5240226-UTR-F-serratus_M_contig78:107253..1072551622932322.5240226-UTR-F-serratus_M_contig78:107253..107255Fucus serratus maleUTRF-serratus_M_contig78 107254..107255 -
1690964252.8126438-UTR-F-serratus_M_contig78:107253..1072551690964252.8126438-UTR-F-serratus_M_contig78:107253..107255Fucus serratus maleUTRF-serratus_M_contig78 107254..107255 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932322.438178-CDS-F-serratus_M_contig78:103407..1035811622932322.438178-CDS-F-serratus_M_contig78:103407..103581Fucus serratus maleCDSF-serratus_M_contig78 103408..103581 -
1690964252.7493274-CDS-F-serratus_M_contig78:103407..1035811690964252.7493274-CDS-F-serratus_M_contig78:103407..103581Fucus serratus maleCDSF-serratus_M_contig78 103408..103581 -
1622932322.4544055-CDS-F-serratus_M_contig78:103759..1040651622932322.4544055-CDS-F-serratus_M_contig78:103759..104065Fucus serratus maleCDSF-serratus_M_contig78 103760..104065 -
1690964252.759004-CDS-F-serratus_M_contig78:103759..1040651690964252.759004-CDS-F-serratus_M_contig78:103759..104065Fucus serratus maleCDSF-serratus_M_contig78 103760..104065 -
1622932322.4714751-CDS-F-serratus_M_contig78:104416..1044881622932322.4714751-CDS-F-serratus_M_contig78:104416..104488Fucus serratus maleCDSF-serratus_M_contig78 104417..104488 -
1690964252.767967-CDS-F-serratus_M_contig78:104416..1044881690964252.767967-CDS-F-serratus_M_contig78:104416..104488Fucus serratus maleCDSF-serratus_M_contig78 104417..104488 -
1622932322.4830322-CDS-F-serratus_M_contig78:104778..1049731622932322.4830322-CDS-F-serratus_M_contig78:104778..104973Fucus serratus maleCDSF-serratus_M_contig78 104779..104973 -
1690964252.7775471-CDS-F-serratus_M_contig78:104778..1049731690964252.7775471-CDS-F-serratus_M_contig78:104778..104973Fucus serratus maleCDSF-serratus_M_contig78 104779..104973 -
1622932322.4948754-CDS-F-serratus_M_contig78:105188..1053321622932322.4948754-CDS-F-serratus_M_contig78:105188..105332Fucus serratus maleCDSF-serratus_M_contig78 105189..105332 -
1690964252.7875116-CDS-F-serratus_M_contig78:105188..1053321690964252.7875116-CDS-F-serratus_M_contig78:105188..105332Fucus serratus maleCDSF-serratus_M_contig78 105189..105332 -
1622932322.5097961-CDS-F-serratus_M_contig78:107166..1072531622932322.5097961-CDS-F-serratus_M_contig78:107166..107253Fucus serratus maleCDSF-serratus_M_contig78 107167..107253 -
1690964252.8000352-CDS-F-serratus_M_contig78:107166..1072531690964252.8000352-CDS-F-serratus_M_contig78:107166..107253Fucus serratus maleCDSF-serratus_M_contig78 107167..107253 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig78.19042.1

>prot_F-serratus_M_contig78.19042.1 ID=prot_F-serratus_M_contig78.19042.1|Name=mRNA_F-serratus_M_contig78.19042.1|organism=Fucus serratus male|type=polypeptide|length=326bp
MPLSPQRKTWYFERLKELLDTHTKIFLVDCDNVGSNQMAKIRFSLRGKAT
LLMGKNTMIRKIISTYCKDNPGHPYELLLPKVVGNVGFIFTNGDLTEIRT
VVEEHRVPAPARVGSIAPTDVKVPPGPTGCDPGQTSFFQVLQVPTKITKG
QIEITTQVFLVAKGQKVGSSEAALLQKLSIRPFTYGLVISSVYDGGSVFD
AAVLDITDADMVRKFANACANIAAVSLELGFPTLASLPHSISNAFRALVA
VVIEGCEKYSFPQADTVKEILADPSAFIAATGGGGDAAADAPAEEKKEEE
EEEEEGVDMGGGMSMFGEEEGGGDY*
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mRNA from alignment at F-serratus_M_contig78:102980..107255-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig78.19042.1 ID=mRNA_F-serratus_M_contig78.19042.1|Name=mRNA_F-serratus_M_contig78.19042.1|organism=Fucus serratus male|type=mRNA|length=4276bp|location=Sequence derived from alignment at F-serratus_M_contig78:102980..107255- (Fucus serratus male)
AGATGCCTCTCTCCCCCCAGCGCAAGACGTGGTACTTCGAACGCCTCAAG GAGCTGCTCGATACCCACACCAAGATCTTCTTGGTCGATGTGAGATGACA GCACAGGGTTAAAATATTTACAGACGGCGGTTGCAATTAATCTCCATCTT TGACGCAGCAATTCTAGTATTGAAATAACAATCTGAACTTGTCCATGCTT TCGGGTGCTACTACAAGTACTGTTTGTTTGAGATATGGTTACTACAGCTA TAATAATGCCTCCTGTGAAACAGTACATATGAGAGGTCGGGGAGGGTACA TATTATGCCAAAGACTCGTCTCGAGTAGATGGATACGTACTGCAGGAGGA AGGCTAAAGGTCGATTAGAGCGCTCCAAAATCGCCCCAAAATTGGGGAAT CTGCCTTATGGTGTTTCACATCTATACTGTAGGGCGATTTGGTATAGTAA GTTTTCTTTGAACACTCCGACGTGTGTGTGTGTTTTCTTTCCATTTATTG TGAACATCAAGTTCGTTACATTTACCAGCCGGGGTCACACAGAACGAAGG TCACACAGGATTTCTCATCCACCTTCCTTCTGCGGTGCGTGCCTTAATTT TTCTCGCAAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTC GAATCTTGTGTACTAACGATTTAATCGTTGTCCACTCGTTGGGCTTTTTT TTATATTGTGAGGAAAAAACAAAAATACCATTACCGGGATTCGAACTCTA TGACGTCATAGTCCCAACGAGTCAGAAGGTTACGAGGTTACCAACTGAGC TATTAATAGCTACCTGGGCGACCGGCTCCGGTTCTTAAGTAAAAAAATTC CGATATATGTCATGCATTTCTCAGGCGCGGAGGGGGACTGGGAAAAAATG GTTTTCCCTCTTAAGCTGACCACTATAATAGCAAGATTGCAAGATTGGCA GTCTTACCCGGTTGATCCATACCTGGTACTCCGCTATATATAATGGCCAA GCTTCAATTACAAGTACCGTAGTATAGTAGTTATTGAGCAGGAACATAAA TGAGCTCCTTTCCCAAAGTATCATAGTCAAATCAACTCGACGGCCGTAGA AGACGTATGCGTTGACCCCCTAAGAGTTGTAAACTGACCGGTACGTTAGC TGGTGTTCCAAGTATCTTAAGGCAAAAAGTGTAGCATGTGACCAGCATAA AGTTAATCGGCGCTGGAGGAAGAAAGTTTGATAGTACTGTACCGGGTTAA CCTGTTGGTCATGTGCCTGGCCATGTACCGAACGCGTCGGTACCCGTTGC TCTAGATACCCATCAGAGCCTCTGTAGACTTTCAGGTTACGGCGTGGCTC CCAGCGGTCAAAGTGCTTATGTTATATACCTGCCACTGAAAAGATTCCAC AAGCAGTTTGGATTTTTACTCATCCATTCGAGTAATTGAAGCAGCTGATG CATGCTGTAGAGAATGAAGATTGGACAAAGACTGGGCATAACTCCTGTAT ATTTCCTGAAATAAATCTATATCTAGAGTGCCGAAGAGCTATAATGCGCC ATTTTTTGTGTGTAAAGTAGCACTCTGACCCCCCCCTTTCGTATTTAAAG AAAAGTTTGGACGCATCAAGCTAGACTTTCCTAGTATTGCAACCAAGACT CTGGTGATTCTAGGCTGAGACTAGGCTGACAGAATGATTCGGTACTAAAT GTACCATGAAATGACACTTGCCTGCTGGTGATGTCCCCGTCCAAGTGTGA TCTCGGGACTTTGTTGAAACATCCTCTTGAACTGTTGTTTTCGTGATACA GTGCTTTTTACGAATCACGTGATATGAAAGTTGCTCACAGATAGATGTCT TATCTGATAACACCACCCTCCCTCTGTCCTGCCCTTGTTATCCCCTTACT CATTGCACTAAACGTGACCTCAGTGCGACAATGTCGGGTCTAACCAGATG GCCAAGATCCGCTTCTCTCTTCGCGGCAAAGCCACCCTGCTCATGGGAAA GAACACCATGATCCGGAAGATCATCAGCACTTACTGCAAGGATAACCCTG GTCACCCCTACGAGCTGGTACAGTACCGCGCGTCGCCCTCGCCCCATCTC CGGAATCAAAACTCAGACGAGAGCAACTGCATTCCGACTCGGAAATGTTT GCGCTGCGCGACCAGCTCACCCAAACGAAAGAGTCGAGTTTTAACACACG CTGTAGACCGTACTTTAAACTCCATTAGGCATGCGTCTTACAGTGATTGT CGTATGCTTTACTACTCCTCCTCACGTTCCAGCTCCTACCCAAGGTCGTC GGCAACGTGGGTTTCATTTTCACCAATGGCGATCTAACCGAAATCCGTAC CGTGGTCGAGGAGCACCGGGTGCCGGCCCCCGCCCGTGTGGGATCCATTG CTCCAACAGACGTGAAAGTACCTCCCGGCCCGACCGGCTGCGACCCCGGA CAGACGTCTTTCTTCCAAGTGCTCCAGGTAATAATAGATTCCGTACGCCA TAACCTTGGCTGCGTGTGGTACAGCATGCTTTTGATACGCCGAGGGGGAA ATGTTTAAATTATCTTTGTATCGTCACTATTTATGTCATTGTGACTGCGT ATGACGGTGTTTCGGTTATGGGTACCTTGGGCGAGGTCAGAAAAATAATA TCACCTCGAGCTTTCCATCTACTACAGGTAACAATTGTTTATTAGTTTAC AGGTGACTGCTTCGAAATTGTTTTCCGTAAGCAAAAAAAAAGCCCTCTGC TCCATGCGCGTGTCCAGGTTCCCACGAAGATTACCAAGGGTCAAATCGAG ATCACCACGCAAGTTTTCCTCGTGGCCAAGGGGCAGAAGGTCGGTAACGT TTGGCATAAATGACATCCATCAGAACTATCGGGGTTGGTTACATATGGTT CGACCTGACTTTACATCACAGTTAAATACAGGATTGTCTTGTAAGGTGGT GTGGAGTGGGCCGCGACTGAAGTGATTTTCATTGACGAGCAACGCAACGG ACCCGGTAACATAGACCAAGAATAAATACTTAGTGCTCGTTTGAGGTTTC TAACCTACACCGGGTGTTTGCCCTCACGCAGGCATCTCCTCCCCTATGCC CGCGGCATGTTTATACCGAACTTTTTTTCTCTCTTCTTGCGTGATGCGCT TACGCTGGGACGATAAAACGGTGCCGTACACACACCACAGGTGGGTAGCT CTGAAGCCGCCTTGCTGCAGAAGCTGAGTATCCGTCCCTTCACCTACGGT CTGGTAATCAGCAGCGTCTACGACGGTGGATCCGTGTTCGATGCTGCCGT GCTGGACATAACTGACGCCGACATGGTCCGCAAGTTTGCCAACGCCTGCG CAAACATTGCCGCGGTGTCGCTGGAGCTGGGTTTCCCGACTCTGGCGTCG CTGCCTCACTCTATCTCAAACGCGTTCCGCGCCCTCGTGGCCGTCGTCAT CGAGGGCTGCGAGAAGTACTCCTTCCCCCAGGCGGATACCGTCAAGGTTA GAACAGGGGCCTGTGGTTCATATTTTTCTTACAAGTCACAAAACCCCTCC ATTCATACCCTCAATGCAAACAATTCTCAAGACACTCTTTGGAGCTTTAG GCCAGTAAAAGTACTGCAGATTGTCGTCGTTAACATTGGCCATCCTTCCT CGATGTAAACTCCGTTGACCGCAGGAGATCCTCGCAGACCCGAGCGCCTT TATTGCGGCGACCGGCGGTGGCGGTGATGCTGCTGCCGATGCGCCGGCGG AAGAGAAGAAGGAAGAGGAAGAAGAGGAGGAGGAAGGGGTCGACATGGGT GGGGGTATGAGTATGTTCGGCGAGGAAGAGGGCGGCGGTGACTACTAACG CCGTCGCTGAAACGATTTCGGTCGACTGCTGTACCTGGTAGCGATGACGA CCTCTTGATTAATTGGACACACTTGTTCCATTGTCCCTTGAGACCACGAG CGTCCAAAAGGGGAGCGCGAGGAGAGATCTTGCCTCAAGTCCGAGGGCAC TAAATTAAATACACACGAGAAACATTCCACACGCATTCATTCATCCCTGC TGATGGCCCCGCTTTACGCGTGCGGCCGTCTTGTGCGGTATTTGTTGGAG TCAGAGAACGAAACTGCATCAGATCCTTCAACGCCGCTGCCTCACTAGCC ATCATTCTTGTTGCTGCAGCGACAAACACCAAAATAAACAACTACTTACA CTTGTAGTTATCCGAAGAACCACTTGTTATCAGTGTTGTTATTTTGTAAT ATTAATAGCCGAACGCAGCTAAACCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig78:102980..107255-

>mRNA_F-serratus_M_contig78.19042.1 ID=mRNA_F-serratus_M_contig78.19042.1|Name=mRNA_F-serratus_M_contig78.19042.1|organism=Fucus serratus male|type=CDS|length=1956bp|location=Sequence derived from alignment at F-serratus_M_contig78:102980..107255- (Fucus serratus male)
ATGCCTCTCTCCCCCCAGCGCAAGACGTGGTACTTCGAACGCCTCAAGGA
GCTGCTCGATACCCACACCAAGATCTTCTTGGTCGATATGCCTCTCTCCC
CCCAGCGCAAGACGTGGTACTTCGAACGCCTCAAGGAGCTGCTCGATACC
CACACCAAGATCTTCTTGGTCGATTGCGACAATGTCGGGTCTAACCAGAT
GGCCAAGATCCGCTTCTCTCTTCGCGGCAAAGCCACCCTGCTCATGGGAA
AGAACACCATGATCCGGAAGATCATCAGCACTTACTGCAAGGATAACCCT
GGTCACCCCTACGAGCTGTGCGACAATGTCGGGTCTAACCAGATGGCCAA
GATCCGCTTCTCTCTTCGCGGCAAAGCCACCCTGCTCATGGGAAAGAACA
CCATGATCCGGAAGATCATCAGCACTTACTGCAAGGATAACCCTGGTCAC
CCCTACGAGCTGCTCCTACCCAAGGTCGTCGGCAACGTGGGTTTCATTTT
CACCAATGGCGATCTAACCGAAATCCGTACCGTGGTCGAGGAGCACCGGG
TGCCGGCCCCCGCCCGTGTGGGATCCATTGCTCCAACAGACGTGAAAGTA
CCTCCCGGCCCGACCGGCTGCGACCCCGGACAGACGTCTTTCTTCCAAGT
GCTCCAGCTCCTACCCAAGGTCGTCGGCAACGTGGGTTTCATTTTCACCA
ATGGCGATCTAACCGAAATCCGTACCGTGGTCGAGGAGCACCGGGTGCCG
GCCCCCGCCCGTGTGGGATCCATTGCTCCAACAGACGTGAAAGTACCTCC
CGGCCCGACCGGCTGCGACCCCGGACAGACGTCTTTCTTCCAAGTGCTCC
AGGTTCCCACGAAGATTACCAAGGGTCAAATCGAGATCACCACGCAAGTT
TTCCTCGTGGCCAAGGGGCAGAAGGTTCCCACGAAGATTACCAAGGGTCA
AATCGAGATCACCACGCAAGTTTTCCTCGTGGCCAAGGGGCAGAAGGTGG
GTAGCTCTGAAGCCGCCTTGCTGCAGAAGCTGAGTATCCGTCCCTTCACC
TACGGTCTGGTAATCAGCAGCGTCTACGACGGTGGATCCGTGTTCGATGC
TGCCGTGCTGGACATAACTGACGCCGACATGGTCCGCAAGTTTGCCAACG
CCTGCGCAAACATTGCCGCGGTGTCGCTGGAGCTGGGTTTCCCGACTCTG
GCGTCGCTGCCTCACTCTATCTCAAACGCGTTCCGCGCCCTCGTGGCCGT
CGTCATCGAGGGCTGCGAGAAGTACTCCTTCCCCCAGGCGGATACCGTCA
AGGTGGGTAGCTCTGAAGCCGCCTTGCTGCAGAAGCTGAGTATCCGTCCC
TTCACCTACGGTCTGGTAATCAGCAGCGTCTACGACGGTGGATCCGTGTT
CGATGCTGCCGTGCTGGACATAACTGACGCCGACATGGTCCGCAAGTTTG
CCAACGCCTGCGCAAACATTGCCGCGGTGTCGCTGGAGCTGGGTTTCCCG
ACTCTGGCGTCGCTGCCTCACTCTATCTCAAACGCGTTCCGCGCCCTCGT
GGCCGTCGTCATCGAGGGCTGCGAGAAGTACTCCTTCCCCCAGGCGGATA
CCGTCAAGGAGATCCTCGCAGACCCGAGCGCCTTTATTGCGGCGACCGGC
GGTGGCGGTGATGCTGCTGCCGATGCGCCGGCGGAAGAGAAGAAGGAAGA
GGAAGAAGAGGAGGAGGAAGGGGTCGACATGGGTGGGGGTATGAGTATGT
TCGGCGAGGAAGAGGGCGGCGGTGACTACTAAGAGATCCTCGCAGACCCG
AGCGCCTTTATTGCGGCGACCGGCGGTGGCGGTGATGCTGCTGCCGATGC
GCCGGCGGAAGAGAAGAAGGAAGAGGAAGAAGAGGAGGAGGAAGGGGTCG
ACATGGGTGGGGGTATGAGTATGTTCGGCGAGGAAGAGGGCGGCGGTGAC
TACTAA
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