mRNA_F-serratus_M_contig1251.1903.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: Q2PQH2_FUCVE (Multifunctional fusion protein n=3 Tax=Fucaceae TaxID=3010 RepID=Q2PQH2_FUCVE) HSP 1 Score: 254 bits (650), Expect = 1.710e-84 Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 426
IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINK NDI+DQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS
Sbjct: 67 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKPNDIEDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 200
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: A0A109QR64_9PHAE (Elongation factor Ts, mitochondrial n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A109QR64_9PHAE) HSP 1 Score: 225 bits (574), Expect = 6.330e-73 Identity = 114/134 (85.07%), Postives = 126/134 (94.03%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 426
IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLY+K DD+P+E F +EKE+EL KNDL NK +IK++IILGRV+KTLK+LSLIDQ FIRDPNITVEEL+KEKISLFGENIKIKRFTRYILG+
Sbjct: 67 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYIKMDDVPKEIFQSEKEMELNKNDLDNKPEEIKNKIILGRVEKTLKKLSLIDQPFIRDPNITVEELVKEKISLFGENIKIKRFTRYILGT 200
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: A0A0S0FB63_COSCS (Multifunctional fusion protein n=26 Tax=Laminariales TaxID=2886 RepID=A0A0S0FB63_COSCS) HSP 1 Score: 215 bits (547), Expect = 8.100e-69 Identity = 108/134 (80.60%), Postives = 123/134 (91.79%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 426
IH GGKIGVLVEVNCETDFVARREEFQELV+NIAMQIAASP+VLYV T+DIP+E F AEKEIE +K DLINK ++IK++IILGR++KTLK LSL+DQ FIRD NIT++ELIKEKI+LFGENIKIKRFTRY LGS
Sbjct: 67 IHAGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDVLYVNTNDIPQELFLAEKEIESEKQDLINKPDEIKEKIILGRIEKTLKNLSLLDQAFIRDSNITIDELIKEKITLFGENIKIKRFTRYTLGS 200
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: A0A8F0FAZ7_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAZ7_9PHAE) HSP 1 Score: 213 bits (541), Expect = 6.620e-68 Identity = 106/134 (79.10%), Postives = 122/134 (91.04%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 426
IHTGGKIGVLVEVNCETDFVARREEFQEL +NIAMQIAASP++ YV D+IPEE F EKEIELKK+DL NK ++IK++IILGRV+KTLK LSL+DQ FIR+PNIT++EL+KEKISLFGENIKIKRFTRY LG+
Sbjct: 67 IHTGGKIGVLVEVNCETDFVARREEFQELAQNIAMQIAASPDIRYVNMDEIPEEIFLTEKEIELKKDDLNNKPDNIKEKIILGRVEKTLKTLSLLDQSFIRNPNITIDELVKEKISLFGENIKIKRFTRYTLGN 200
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: A0A8F0JZ93_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZ93_9PHAE) HSP 1 Score: 210 bits (535), Expect = 5.590e-67 Identity = 106/134 (79.10%), Postives = 122/134 (91.04%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 426
IH GGKIGVLVEVNCETDFVARREEFQELV+NIAMQIAASPEVLYV +++IPE+ F AEK IE +K+DL NK +IK++IILGRV+KTLK+LSLIDQ FIRD NIT++ELIKEKISLFGENIK+KRFTRY LG+
Sbjct: 67 IHAGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPEVLYVNSEEIPEQVFLAEKAIEAEKDDLSNKPPEIKEKIILGRVEKTLKKLSLIDQAFIRDANITIDELIKEKISLFGENIKVKRFTRYTLGN 200
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: A0A8F0JXQ3_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXQ3_9PHAE) HSP 1 Score: 205 bits (521), Expect = 7.270e-65 Identity = 104/134 (77.61%), Postives = 120/134 (89.55%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 426
IHTG KIGVL+EVNCETDFVARREEF EL NIAMQIAASPEV+YV DDIP+E F AE+EIELKK DL NK N+IK++I+LGRV+KTLK LSL++QQFIR+P+ITVEELIKEKI+LFGENI+IKRF RY LG+
Sbjct: 67 IHTGAKIGVLLEVNCETDFVARREEFHELANNIAMQIAASPEVIYVNFDDIPKEYFKAEREIELKKEDLFNKPNEIKEKIMLGRVEKTLKTLSLLNQQFIRNPSITVEELIKEKIALFGENIRIKRFIRYNLGN 200
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: A0A8F0JY19_9PHAE (Elongation factor Ts, mitochondrial n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JY19_9PHAE) HSP 1 Score: 204 bits (520), Expect = 1.030e-64 Identity = 103/133 (77.44%), Postives = 119/133 (89.47%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILG 423
IH GGKIGVLVEVNCETDFVARREEFQELV+NIAMQIAASP+VLYV DD+P+E F AEKE+E K+DL NK ++K++IILGRV+KTLK LSL++Q FIR+ NITV+ELIKEKISLFGENI+IKRFTRY LG
Sbjct: 67 IHAGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDVLYVNIDDVPKELFLAEKEVESGKDDLSNKPEEMKEKIILGRVEKTLKNLSLLNQSFIRNQNITVDELIKEKISLFGENIRIKRFTRYTLG 199
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: A0A6B7EV40_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV40_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.860e-64 Identity = 100/134 (74.63%), Postives = 122/134 (91.04%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 426
IH GG+IGVL+EVNCETDFVARREEFQELV++IAMQ+AA P+VLY+K+++IPE+ F AEKEIE K+DL NK +DIK++IILGRV+KTLK L+L+DQ FI+D NITV+ELIKEKISLFGENI+IKRFTRY LG+
Sbjct: 66 IHIGGRIGVLIEVNCETDFVARREEFQELVQDIAMQVAACPDVLYIKSEEIPEDVFLAEKEIESGKDDLNNKPDDIKEKIILGRVEKTLKNLTLLDQPFIKDTNITVDELIKEKISLFGENIRIKRFTRYTLGN 199
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: D1J791_ECTSI (Multifunctional fusion protein n=5 Tax=Ectocarpales TaxID=2877 RepID=D1J791_ECTSI) HSP 1 Score: 201 bits (511), Expect = 2.330e-63 Identity = 101/134 (75.37%), Postives = 121/134 (90.30%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 426
IH GGKIGVL+EVNCETDFVARREEFQELV+NIAMQIAASP+VLY+++ DIPEE F EK+IE +K DLINK ++IK++IILGRV+KTLK L+L++Q IRD +ITV+ELIKEKISLFGENI+IKRFTRY LG+
Sbjct: 66 IHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEEIFLNEKKIESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPCIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 199
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Match: A0A7T8JK51_SCYLO (Multifunctional fusion protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A7T8JK51_SCYLO) HSP 1 Score: 197 bits (500), Expect = 1.100e-61 Identity = 98/134 (73.13%), Postives = 117/134 (87.31%), Query Frame = 1
Query: 25 IHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKSNDIKDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 426
IH GG+IGVL+EVNCETDFVARREEFQELV+N+AMQIAASP+VLY++ DDIPE+ EK IE K DL NK +DI+++IILGR+ KTLK L+L++Q FIRD NITV+ELIKEKISLFGENI+IKRFTRY LG+
Sbjct: 66 IHIGGRIGVLIEVNCETDFVARREEFQELVQNLAMQIAASPDVLYIQNDDIPEDIISNEKAIESGKEDLSNKPDDIREKIILGRIDKTLKNLTLLNQPFIRDANITVDELIKEKISLFGENIRIKRFTRYTLGN 199 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1251.1903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1251.1903.1 >prot_F-serratus_M_contig1251.1903.1 ID=prot_F-serratus_M_contig1251.1903.1|Name=mRNA_F-serratus_M_contig1251.1903.1|organism=Fucus serratus male|type=polypeptide|length=143bp MNEPPGARIHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEback to top mRNA from alignment at F-serratus_M_contig1251:121377..121805+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1251.1903.1 ID=mRNA_F-serratus_M_contig1251.1903.1|Name=mRNA_F-serratus_M_contig1251.1903.1|organism=Fucus serratus male|type=mRNA|length=429bp|location=Sequence derived from alignment at F-serratus_M_contig1251:121377..121805+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1251:121377..121805+ >mRNA_F-serratus_M_contig1251.1903.1 ID=mRNA_F-serratus_M_contig1251.1903.1|Name=mRNA_F-serratus_M_contig1251.1903.1|organism=Fucus serratus male|type=CDS|length=858bp|location=Sequence derived from alignment at F-serratus_M_contig1251:121377..121805+ (Fucus serratus male)back to top |