mRNA_F-serratus_M_contig779.19031.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig779.19031.1
Unique NamemRNA_F-serratus_M_contig779.19031.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig779.19031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig779contigF-serratus_M_contig779:169794..176149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size490
Cds size489
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig779.19031.1prot_F-serratus_M_contig779.19031.1Fucus serratus malepolypeptideF-serratus_M_contig779 169794..176149 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932318.7641895-CDS-F-serratus_M_contig779:169793..1699461622932318.7641895-CDS-F-serratus_M_contig779:169793..169946Fucus serratus maleCDSF-serratus_M_contig779 169794..169946 +
1690964250.9029803-CDS-F-serratus_M_contig779:169793..1699461690964250.9029803-CDS-F-serratus_M_contig779:169793..169946Fucus serratus maleCDSF-serratus_M_contig779 169794..169946 +
1622932318.7794473-CDS-F-serratus_M_contig779:175360..1755491622932318.7794473-CDS-F-serratus_M_contig779:175360..175549Fucus serratus maleCDSF-serratus_M_contig779 175361..175549 +
1690964250.9139225-CDS-F-serratus_M_contig779:175360..1755491690964250.9139225-CDS-F-serratus_M_contig779:175360..175549Fucus serratus maleCDSF-serratus_M_contig779 175361..175549 +
1622932318.7939444-CDS-F-serratus_M_contig779:176002..1761491622932318.7939444-CDS-F-serratus_M_contig779:176002..176149Fucus serratus maleCDSF-serratus_M_contig779 176003..176149 +
1690964250.925539-CDS-F-serratus_M_contig779:176002..1761491690964250.925539-CDS-F-serratus_M_contig779:176002..176149Fucus serratus maleCDSF-serratus_M_contig779 176003..176149 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig779.19031.1

>prot_F-serratus_M_contig779.19031.1 ID=prot_F-serratus_M_contig779.19031.1|Name=mRNA_F-serratus_M_contig779.19031.1|organism=Fucus serratus male|type=polypeptide|length=163bp
MLMKTGSVACPACESNLCLRSAIGEHESGSWSAHPWVHTHVGHPELSKSY
ELQEASGKAAKTAENGRDKVLHGVPLHLMERSSLRDEGEKLKHQRLLALR
TGSLYDFVTPAPNETQTGTTESLPAEARDASRGSKRQQAPKRIHRRIDTS
VAGTGAGQALSIT
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mRNA from alignment at F-serratus_M_contig779:169794..176149+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig779.19031.1 ID=mRNA_F-serratus_M_contig779.19031.1|Name=mRNA_F-serratus_M_contig779.19031.1|organism=Fucus serratus male|type=mRNA|length=6356bp|location=Sequence derived from alignment at F-serratus_M_contig779:169794..176149+ (Fucus serratus male)
ATGTTGATGAAAACAGGATCTGTCGCGTGTCCTGCGTGCGAGAGCAATCT
GTGCCTTCGTTCGGCGATCGGCGAGCACGAGAGCGGCAGCTGGAGTGCGC
ATCCTTGGGTGCACACCCATGTTGGACATCCAGAGTTATCCAAGTCGTAT
GAGGTCAGGGAGATCGGTCGTGCTGCTCTCGATGTTTTTGTGTACCAAGT
GCGGGTACAAAATAAAAATAACCGTTTCGGCTCCAGTGAGCATTAGAGTA
CTTCTCCAGTCTCGACAGAAGCAGGAAGATAGTATGTAGATGGATGGTTT
TGAGCGTTTGCTCCCACCACCAtaataacgTAATAATAACCTCCAGCAAT
ATTACGACAGATATTTTCGCTTCGATTAGACTCACACCCTCACTCTAGCC
CGCTGGCTGGTGTATTTCATAACGGCGTTAAAATGTAATGCGCGACTTCT
ACTGTGTAAGTGTACCGAGAGTCTCGTCCGAGTGAATGGCTAGTCTAGAT
CCCTTTTGACAATCTGGAATCTTCTGATACGAAAAATCTGAACGCAGCTA
TAAACCTCCTGAGCAATCAAAAGATTTAGGTGGGATCCCTGTTAAAAGCA
AAATCTGAAAGCGCTTAGACCTTCTGAGCATCCCCCAGTCTGGAGGGAAA
ATGTCAAAACGTTTAGGTGGGATCATAGGCTGCAAAAACAAAACCTCTTG
ATGGCATTTAAACGGGTTCCCCGATGGTACGAGGTAATATTATTAATATT
AATAGTAGCATTGGGTAAACAGTAAAATATCGGGGGAAAGCCCACCGTTA
TACTGTGTGTGTGTTTGTTTTCTTCCTGTTCATTCTGGACATCAGTTCGT
TGGACGCAGCAGCCGGGGTCACACAGGGGAAGGTCACAAAGGATTTCTCA
TCCACCTTCCTTCTGCGGTGCGTGCCTTAAATCTTCTCGCGAGAAGGGTT
CAGCCATGCCCTTCCCTCGTCCACCGTGAAGTCGAATTTGTGTACCAGTA
CTATTTATAACGATTTTATCTTTCTCCACTCGTTGGGCATTTGTTTTTTT
GTTTTTTTTTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAACTCAC
GTCCCAACGTGCCAGAGGGTTACGAGGTTACCTCTGAGCTACCGGGGCGA
CCGGTCAGTGTATGAATGTATGAATGTATGATATATTCGCCGGTACTTTC
AACATGCCCACTTCATACCATATTAATAGTGGGTGTGGGAAAGAGAGGCG
TATATTAACTGGTCCATGGTGACCTGCTAAGGCAGCACTCGTTTGGAACT
ACCTTGAGGTTTACTAGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCC
ATCAGTACGCAATTGCGTGACCCGATAAACTCGGGACTTACCCGATGGCG
TAAGGCGGTTTAATATAAATATATGGACGCCGCCGCTGAACTCGGGAGGA
ATCCCGTTATTAGTAAGATTCAGTCTGAGTATGGAGATGAGCAGGCTGGC
GCGGGACGGGACTGCCGAAACCGTCTCGCGAGACCAAATTCTCAGGCGCG
AACGGGGACAGAAGAATATTATTTTCCCTGTTCAGCTGACCACGAGCAGG
ATTGGCAACCTTACCCGGTTGATCCATACTCTTGCTATATGTGTGACCAT
ACATAGCAGAGTATGGATCAACCGTGCAAGGTTGCCAATCCTGCTCGTGG
TCAGCTGAACAGGGAAAATGAACATTCCCCTGTCCCCATGCGTGCCTGAG
AATTTGGTCTCGCGAGACAGGTTCAGCCGTCCCGTCCCGCGTCAGCCTGC
TCATCTCCATACTCAGGCTGAATCTTGTGCTTACTTACGGGATTCCTCCC
GAGTTCCGCAGCGGCGTCTATTTATTCATTTATAACCGACACACGCCATC
GGGTCAGTCCCGAGTTTATCGGGTCACGCAGTTGTTGCGTACCGATGGCG
TTCACTGCCGAGAGTCCGCCGGTACAGGGCCAGTAAACCCCAAGGTAGTT
CCGAACGAGTGCTGCGTTGGCAGGTCACCATGGACCAATTAATATTCGCT
TCTCTTTCCCACACCCACTATTGGTATGAAGTGGGCATGTTGAAAGTACC
GGCGGTATTGTGCAATTACATTAATCGCCACGCAGGGAAACCAAAAAAAC
TTTAACAAACAAAAACATTGTAGTTCATACCACAAACTCTGAAAGTAGAC
GAAGAGCAGTGGTGGGAGATCGCACAAGGAAGTAAGAGGCAAGCCAAGTA
GGTATGGTCCCCACGTGCGATGTCAGGTCAATGGCTACCAGACACTCCTC
ATGCACAAAAAGCAAACCACGGTCCACGCGTTTAAACCGGAAACAAAATA
ACGGGGGAAAAAAGTATCTGCTGGCCAACGCATGACACGCACCGCATGGG
CTATGTTATGCCTCGAACAAACCAAGATGGGGATCTTCGTGTCTAAAGAA
AAATCTGGATGCATTTAGACCTTCTGAGATGTCATACTATACTATACTAT
ACACCAGTCAGGGGGGGAAATGTCAAAACGTTTAGGTGGGATCATAGTAT
AGGCTGCAAATACAAAACCTCTTCATGGCATTATAACGGGTTCCCCAATC
GCAGTAGTAGCTGTTGTTGTTGTTGACTCACAGATTCAGCGTTTTATCCT
GGCAACTTGATGAAACTACGGTAACGCAACAAGTCAGCTTTAAGACATAT
CAAATGACAATCACACAACCACAGAAAGACTCGGGCGGAAGGGGGAAAAA
AACGTCGACCCAGAAGATCTAGAGAATAGAATAGAAAGGGATCAACAAAG
AGGAAAGCGCAAGACGCGGCAACTAGAGAGAGAGAGTGTGCCCCCTTTGT
CGCGTCTTATCAGAGGTTTTCGTAATAAATATCGCTGATTCCCCATTGGG
AGGATCAATGCGAGTGATATAGAATGGCTAGGATGGCAGGGACCGGATTG
CGCGACTATGAATAGTTTGATAAATACGCAAAACCTGCTACGCAAACCAA
CGGGGATCCAAATCGCGACAAAATTCTTGCTAGGGTCCAACCACCGGAGA
ACATCGGAAACCCGTCGGGGCCACGGCGATGTCTTTGGGTACGGCCTACA
CAGCGTCTACTGTCTGGAGTGCTGCCAGTATTGCAGAATCTGAATCACAA
GCTTACAGAGATGACTGTCCGATGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTCCTCACATTCAGCGTATTGGTTGCCAACTCGAAAAAACTACTTTACA
CGGTGGCCAATCCCGCTCGTGGTCTAGTCTGCTCAACAGGGGGAAAAAGA
AGAAGAAAAAAGTCTGGCAGCGCAGCCCCCCGCCCCGCCCCCCTGCGCTG
CTCGTTCGGAGAAAATAAAATAAAAACCACGCGACGCATCTACATGCGTA
GGCGCTTCCCAGGTCTCGGTCCATCTCTCATCTGCACAAGGATTCCTTCG
CCTCTTCGGCTGAGCCAATGGGGGTCGCTTCGCAAGATTCTACGCTTCCG
TGTACGATAACAACTTTCCAGTCTCGCTGCCTCTCTCTTCTCCTGGCGAT
GTCTAGCCGCGGTTACCTCTTCTTTCCTCCACGCGGCCATGAACCTCCGC
CCACCCTCTGCGACCGTCTCAACCCACACCCCAGCCTCTAACGCCGTCGC
TTTCCAGTCTCTCGTTATACCGAAAGCCCGGATGTCGCTCTGTGCTGCCC
ATCTATCAAACAAAGTAATCAAAAGTGACTAATAAAATAAAATGAAATCT
AGCTGTCGGAGGGTTATTAGACGGAAACAAGTTAATGACAATGTCCCCGA
CCGACAATGTCAAAACGGTTCATCAAACCTCCTTACCCATTTCGAGAGTA
ACCCCGATCGCATTGGAATCTTTCCGCCTACTCACGGCCAGCATTCTCTT
CAACAAAGCTAACCGATCACGTTTTGGATCGCAATCAGTTCTGATCAACA
CGCCCAAGTTCCTCGTGGCCTCACGCGTCATGCAGAAACTTGTGAGGATT
CGTGGATGAATGCCATAGGTTGCAAGATCTTCACTTTTTGGCAAGCATCT
ATCTGCGATAGCCAGATATAGAGCTATATTAATAGAAAAAAATTGGGAGG
AATCCCGTGAGTGAGCACCAGATTCAGCCTGAGTGTGGAGAATGAGCAGG
CTGACGCGGGACGGGACGGCCGAACCCGTCTTGCGAGAGAGACCAAATTC
TCAGGCACGTACGGGGACAGGGGGATGTCCATTTTCCCTGATCAGCTGAC
CACGAGCAGGATTGGCTACCTTACCCGGTTGATCCTTACTCTTGCTATAT
GGGATGCCCAATGTTTAGAAGTATTGCTGACTCGAATGTGGTGTAGAAAA
GTTCGTAAGACCAAGTTCTCAGGTGCGAACAGGGACAGGGAGCATTTGTT
TACCCTGTTTCTGTTCGGTAGACCACGAGCAGAATTGGGAACAGTCCTCC
TTGCTCTCGGCTGATGCCCCGTCTACTACGTAAACAACAGTTGGAGCTCT
ATGATTACAAGCTCGCCGATTCGTGACAAACATCTTGGAAGTGTTGTTGA
TATCCTTCTCCCGTGCAGTGTATGATGCTCACAGCACAGGTCTACAAGGT
GGCATCAGGCATGCTTGATTAGCGCCGCATTCCAAAGAGCCAAAGAAACA
TTTTCTAGACAGATATGGCGACGCATTGGACGATGTCAAACAGCATGCAG
GTCGATCTACTCTAGTAATAAAGATACTAGATATAAAATAGAGCTTGGTC
TACGCACAAGCTCCACACCTACAATCAAGGCGGCTTTGCGTATGTATGCG
GTGCTCCAAGCGCCAATCGCTCCGTTTGCGAGCGCCTGCATTTGGACTAC
CAACATTTTGAGCACCTTGTTTAAGGACCTAGATTTCAGTGATCCATGTA
GTGACTCTCTCTTCCAGGCTATCGTTAGCGACGCTTGACTCGTGTACGCC
CATCTTGACACATAGTTAGATACAGTTTTCAGACGACGCCAGTTCTGTCA
GCCATTTCGTGCGCGGTGTCCCCCCCTCCCCCGAATGGTGACCTAACATT
GCTGCTAGAACTTCCGCCGTTTACCTCCCATTAAACCAGAACGCCAACCA
GGAGGATGCACGGTGGCGACCGTTTACCTCTGCGGATAATCTCTGCCAAT
GAGATAAAAGTCCGCGCAAAATGCTGACACTCTGTATTTTAGGCCCTCTG
GTTTCATTTAGCCTGACAGAGGTACATCAGTAGTTCAAGGGGTGAATCAT
GTGCTACCTTTGAATTGAAAATGATACTCGTAGCCAAAAAGGTGAGGCGA
GCCTTGCTAGAGCGCTTGGCGTGGGTGCCATCCAATACTAAGCAAGCAGA
CGCTCGATCGGCCATCCGCGGCGGTGCGTATAGGATATATTTCTGATAAA
CGATCAGGGCAATAAATCAATGTTGTTTTTGCGCTGCTGTGGTAGTGAAC
ACCGGCCTTCCTGCGGAACACAAAACGTTTATCGCTAACGGTTTTCCCTA
TGAGACGGCACAAATCGACCCTCATCCACACACAGCAGAACGGTTTTTCA
CCCCTCGGAATCGGCAGCTGCAAGAAGCGTCGGGGAAGGCGGCCAAGACA
GCAGAGAACGGTCGCGACAAAGTTTTACACGGAGTCCCGTTGCACCTGAT
GGAGAGGTCAAGTCTAAGGGATGAAGGGGAAAAGCTCAAGCATCAGAGGC
TCTTGGCCCTCAGAACTGGGAGTTTGTACGATTTCGTCACTCCCGCCCCC
AATGAGGTAGATCCGCAACATTAGGGCCGCGGAGTCGGGGCGGTATCCTC
CAAGCGTTGTGGGAGTGCAGTTGAGCTAGGGTCGGATGTTTCCCAATACC
ATTGACGTTGCCTGATGAGCCAAAAGAAAAAAATGTGTTCCGGGCCCTTG
CTGAAAATATTAGAAAGCGGTACACAGCACTGCTAAAATACTGATCCGGT
GTACGAGGGGTTGCGAGCGGCGCCTTCGTATCCCAGCTGTCGTACTCGCC
AAAGGGCTCACATGCCTATGCCACCCCCCCCCCAACAAAGGTGAATCAAT
GCAGTGTTTACCCTTTATGCTCTCACCCTATTTGGCCAACATCCATGGCG
GATAGTTAGCGTAGTATCCTTTTTTGTTAAGAACTCCAAACTCGATCTCC
CGCCCCCGCCGTGTCTTACGCTACCTGCCTCCGGCCCACTTCGGCGTGCG
TGGAGGAAGACACAAACGGGAACCACGGAATCGCTCCCGGCAGAGGCAAG
GGACGCCTCTCGAGGCAGTAAGCGCCAGCAGGCCCCGAAGCGCATCCATA
GAAGGATCGATACGAGTGTTGCTGGAACAGGTGCCGGCCAGGCGCTGTCC
ATAACC
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Coding sequence (CDS) from alignment at F-serratus_M_contig779:169794..176149+

>mRNA_F-serratus_M_contig779.19031.1 ID=mRNA_F-serratus_M_contig779.19031.1|Name=mRNA_F-serratus_M_contig779.19031.1|organism=Fucus serratus male|type=CDS|length=978bp|location=Sequence derived from alignment at F-serratus_M_contig779:169794..176149+ (Fucus serratus male)
ATGTTGATGAAAACAGGATCTGTCGCGTGTCCTGCGTGCGAGAGCAATCT
GTGCCTTCGTTCGGCGATCGGCGAGCACGAGAGCGGCAGCTGGAGTGCGC
ATCCTTGGGTGCACACCCATGTTGGACATCCAGAGTTATCCAAGTCGTAT
GAGATGTTGATGAAAACAGGATCTGTCGCGTGTCCTGCGTGCGAGAGCAA
TCTGTGCCTTCGTTCGGCGATCGGCGAGCACGAGAGCGGCAGCTGGAGTG
CGCATCCTTGGGTGCACACCCATGTTGGACATCCAGAGTTATCCAAGTCG
TATGAGCTGCAAGAAGCGTCGGGGAAGGCGGCCAAGACAGCAGAGAACGG
TCGCGACAAAGTTTTACACGGAGTCCCGTTGCACCTGATGGAGAGGTCAA
GTCTAAGGGATGAAGGGGAAAAGCTCAAGCATCAGAGGCTCTTGGCCCTC
AGAACTGGGAGTTTGTACGATTTCGTCACTCCCGCCCCCAATGAGCTGCA
AGAAGCGTCGGGGAAGGCGGCCAAGACAGCAGAGAACGGTCGCGACAAAG
TTTTACACGGAGTCCCGTTGCACCTGATGGAGAGGTCAAGTCTAAGGGAT
GAAGGGGAAAAGCTCAAGCATCAGAGGCTCTTGGCCCTCAGAACTGGGAG
TTTGTACGATTTCGTCACTCCCGCCCCCAATGAGACACAAACGGGAACCA
CGGAATCGCTCCCGGCAGAGGCAAGGGACGCCTCTCGAGGCAGTAAGCGC
CAGCAGGCCCCGAAGCGCATCCATAGAAGGATCGATACGAGTGTTGCTGG
AACAGGTGCCGGCCAGGCGCTGTCCATAACCACACAAACGGGAACCACGG
AATCGCTCCCGGCAGAGGCAAGGGACGCCTCTCGAGGCAGTAAGCGCCAG
CAGGCCCCGAAGCGCATCCATAGAAGGATCGATACGAGTGTTGCTGGAAC
AGGTGCCGGCCAGGCGCTGTCCATAACC
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