mRNA_F-serratus_M_contig776.19015.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: D8LCP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP9_ECTSI) HSP 1 Score: 343 bits (880), Expect = 1.900e-112 Identity = 149/210 (70.95%), Postives = 173/210 (82.38%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTNLMFATMCHGTWNYLSEVEIFRPFLYRWRTDNQWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLEWPLQVSLSGGNIDAENRLARWGLDDIWRIVWMTLIFGALMPLSRSAWALRKNYSLAMWLHMSLGAGIFFDSWRRKTHPHVWFLNTPVLLWYLADKFWCSTRGRRGS 630
D GCLK GPWS K FD IARASAR IISTTNLMF TMCHGTWN+LSEV++ RPFLY WRTDN WLH++GGWTMG W ++HV+ L LP L +G+KNV VGG +E P QVSL+ N+D +N+LA WG DDIWRI WMTLIF L+PLSRSAWAL+KN++LAMWLHM +G G FFD+WRR+THPHVW LNTPV LWY+ADK WCSTRG G+
Sbjct: 3 DDPGCLKAGPWSAKAFDAIARASARFIISTTNLMFITMCHGTWNFLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSLFHGFKNVAVGGPVELPFQVSLAVSNVDVDNKLANWGYDDIWRIFWMTLIFCVLIPLSRSAWALKKNFTLAMWLHMGVGIGYFFDNWRRRTHPHVWILNTPVFLWYIADKVWCSTRGSDGT 212
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: D7G5T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T0_ECTSI) HSP 1 Score: 342 bits (878), Expect = 9.020e-110 Identity = 147/207 (71.01%), Postives = 172/207 (83.09%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTNLMFATMCHGTWNYLSEVEIFRPFLYRWRTDNQWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLEWPLQVSLSGGNIDAENRLARWGLDDIWRIVWMTLIFGALMPLSRSAWALRKNYSLAMWLHMSLGAGIFFDSWRRKTHPHVWFLNTPVLLWYLADKFWCSTRGR 621
D GCLK+GPWS K FD IAR SAR IISTTNLMF TMCHGTWNYLSEV++ RPFLY WRTDN WLH++GGWTMG W ++HV+ L LP + +G+KNV VGG +E PLQVSL+ N+D +N+LA WG DDIWRI+WMTLIF L PLSRSAWAL+KN++LAMWLH+ +G G FFD+WRR+THPHVW LNTPV LWY+ADK WC TRGR
Sbjct: 161 DDPGCLKDGPWSAKTFDVIARISARFIISTTNLMFITMCHGTWNYLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSIFHGFKNVAVGGPVELPLQVSLAVSNVDLDNKLANWGYDDIWRIIWMTLIFCVLTPLSRSAWALKKNFTLAMWLHIGVGVGYFFDNWRRRTHPHVWILNTPVFLWYIADKVWCCTRGR 367
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: D7G5S8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S8_ECTSI) HSP 1 Score: 171 bits (433), Expect = 4.590e-48 Identity = 73/140 (52.14%), Postives = 97/140 (69.29%), Query Frame = 1
Query: 220 MGFWIVVHVWLLFLPWLANGYKNVKV-----GGDLEWPLQ-VSLSGGNIDAENRLARWGLDDIWRIVWMTLIFGALMPLSRSAWALRKNYSLAMWLHMSLGAGIFFDSWRRKTHPHVWFLNTPVLLWYLADKFWCSTRGR 621
+G W+ + +++ + N + + GGD + V L N+D +N+LA WG DD+WR++WMTLIF L PLSRS WAL+KN+SLAMWLH+ +G G FFD+WRR+THPHVW LNTPV+LWY+ADK WC T GR
Sbjct: 7 LGVWLFISTFMVLDRFYWNVWPRQSICTDGCGGDFFCDMDDVGLMASNVDVQNKLANWGYDDVWRLIWMTLIFCVLTPLSRSVWALKKNFSLAMWLHIGVGMGYFFDNWRRRTHPHVWILNTPVVLWYIADKIWCCTEGR 146
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: A0A7S1AZW1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AZW1_NOCSC) HSP 1 Score: 124 bits (311), Expect = 2.770e-29 Identity = 71/198 (35.86%), Postives = 104/198 (52.53%), Query Frame = 1
Query: 16 LKEGPWSVKVFDFIARASARLIISTTNLMFATMCHGTWNYLSEVEIFRPFLYRWRTDN----QWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLEWPL-QVSLSGGNIDAENRLARWGLDDIWRIVWMTLIFGALMPLSRSAWALRKNYSLAMWLHMSLGAGIFFDSWRRKTHPHVWFLNTPVLLWYLAD 594
LK GPW+V ++D +AR S R + ++ N++ TM H T L E R L + ++ +WLH V G+ GF ++ HV+ + P +GY G L PL + + G ++D E +L DD+WR++ MTL F L P S LR NY + + LH + F D RR +HPH W LN PV ++AD
Sbjct: 154 LKLGPWTVPLYDVVARISGRFLTTSLNILMWTMMHTTHRVLQESWFARCGLVDFAQESDESRRWLHNVNGYLSGFLVLFHVYSILFPVFLHGYSAYVTPGSLALPLSERRIEGTDVDNEGKLMGLQGDDVWRLIEMTLFFVILFPWSLRL--LRCNYRVGIQLHRWVFILYFIDIARRHSHPHNWVLNVPVFFLWVAD 349
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: A0A448YYA3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYA3_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.410e-25 Identity = 75/220 (34.09%), Postives = 103/220 (46.82%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTNLMFAT---------MCHGTWNYLSEVE-IFRPFLYRWRTDNQWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLEWPLQVSLSGG--NIDAENRLARWGLDDIWRIVWMTLIFGALMPLSRSAWALRKNYSLAMWLHMSLGAGIFFDSWRRKTHPHVWFLNTPVLLWYLADKFWCSTRGRR 624
D L K GPWSV +D IAR S R I NL+ T +C N + + I + N LH G + +HVW + P + +GY + G EWPL G + DA N+ +DD+WR+V MT++F L+PLS ++ R + + M LH + F D RR THPH W LNTP+ ++ DKFW RR
Sbjct: 76 DRLVGFKPGPWSVVAYDVIARISGRFSICAYNLLLITRLRCLEHCILCSKWVNRMIDCSNIIKA--------NLRLHKWNGIALCVLTFIHVWSILFPCVFHGYTAKVIRGTFEWPLSERPPPGFKDADAVNKQMGLEIDDVWRMVEMTVMFCILLPLSVRWFSTR--WHIGMPLHRLINVLYFVDIVRRHTHPHSWVLNTPIFCAWVFDKFWMWYSNRR 285
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: A0A6U9ZH54_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZH54_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.670e-23 Identity = 75/222 (33.78%), Postives = 99/222 (44.59%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTNLMFAT---------MCHGTWNYLSE-VEIFRPFLYRWRTDNQWLHTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLEWPLQVSLSGGNIDAE--NRLARWGLDDIWRIVWMTLIFGALMPLSRSAWALRKNYSLAMWLHMSLGAGIFFDSWRRKTHPHVWFLNTPVLLWYLADKFWCSTRGRRGS 630
D + K GPWSV +D IAR S R I NL+ T +C N + + I + N LH + VHVW + LP + + YK G EWPL G DA+ + +DD+WR+V MTL+ +PLS W L +Y + M LH + F D RR THPH W LNTP+ ++ DKFW R S
Sbjct: 120 DQIVGFKSGPWSVVAYDVIARISGRFSICAFNLLLVTRLRCLEHILLCSKWINKVLDCTNIIKV--------NLRLHKWNAIVLCILTFVHVWSILLPCITHNYKAKVNPGYFEWPLSERKPPGFKDADPLTKTMSLQIDDVWRLVEMTLLMCVFVPLS-VRW-LSTHYHIGMPLHRLITVLYFVDIVRRHTHPHSWVLNTPIFCAWVFDKFWFWYSNRHQS 331
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: A0A7S1FVX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVX4_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.790e-16 Identity = 48/145 (33.10%), Postives = 73/145 (50.34%), Query Frame = 1
Query: 19 KEGPWSVKVFDFIARASARLIISTTNLMFATMCHGTWNYLSEVEIFRPFLYRWRTDNQWL--HTVGGWTMGFWIVVHVWLLFLPWLANGYKNVKVGGDLEWPLQVSLSGG--NIDAENRLARWGLDDIWRIVWMTLIFGALMPLS 441
K GPWSV +D +AR S R I N M + H +++ I R L N L H G + ++HVW + LPW+ +G+ + G++EWPL G + D + ++ +DD++R+V MTL+ G L PLS
Sbjct: 2 KPGPWSVVFYDIMARVSGRFSIVCFNFMLISRLHILEQFIANSWIIRSVLDCSNIVNANLQAHKWNGIALVILTLIHVWSILLPWITHGWGAQVIPGNMEWPLSERTPPGFKDADPDKKMMSLQVDDVFRMVEMTLLLGILTPLS 146
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: A0A7S1DHK8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DHK8_HEMAN) HSP 1 Score: 78.2 bits (191), Expect = 2.620e-14 Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 235 VVHVWLLFLPWLANGYKNVKVGGDLEWPLQVSLSGG--NIDAENRLARWGLDDIWRIVWMTLIFGALMPLSRSAWALRKNYSLAMWLHMSLGAGIFFDSWRRKTHPHVWFLNTPVLLWYLAD 594
VVHVW + P + + + G E+PL G +ID+ N +DD++RI+ MTL+ LMPLS W +++ Y + LH + F D RR THPH W NTP + +L D
Sbjct: 9 VVHVWSVLFPPIFHKWALEVKAGTFEYPLSERKPEGFKDIDSANEKIMLQVDDVFRIIEMTLLLCVLMPLS--IWWMQQYYHVGKHLHGFIAILYFIDIVRRHTHPHSWIFNTPFFVLWLLD 128
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: UPI0009E1B165 (uncharacterized protein LOC110040179 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1B165) HSP 1 Score: 72.8 bits (177), Expect = 2.350e-11 Identity = 62/214 (28.97%), Postives = 101/214 (47.20%), Query Frame = 1
Query: 10 GCLKEGPWSVKVFDFIARA----SARLIISTTNLMFATMCHGTWNYLSEVEIFRPFLYRWRTDNQWLHTVGG-WTMGFWIVVHVWLLFLPWLANG----------YKNVKVGGDLEWPL---QVSLSGGNIDAENRLARWGLDDIWRIVWMTLIFGALMPLSRSAWALRKNYSLAMWLHMSLGAGIFFDSWRRKTHPHVWFLNTPVLLWYLADK 597
G L + W + + I +ARLII++ NLMF TM N++SE+ + R + +HT+ G + + + HV ++F+P L +G + K L W ++ G + N + D+I+R V M +IF PLSRS +A +++YSLAM LH+ G D+ R+ TH N P+L+ + D+
Sbjct: 292 GKLPKRMWGTSIGETITNVVWAVTARLIITSQNLMFYTMLWCFSNFISEIGPKWITMNGIREVHSRIHTLAGIFLIAIPSLAHVLVIFVPPLIDGTELKYYPPSTFNFSKYPDHLNWSKFWDPAAVQGWTFNDHNGVHLTS-DEIYRFVLMIVIFCFFFPLSRSHYANQRSYSLAMALHVFAGIWYAVDNIRKITHGLAHVTNLPMLIIWCIDR 504
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Match: A0A7S0TNI5_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TNI5_HEMAN) HSP 1 Score: 67.8 bits (164), Expect = 3.340e-11 Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 1
Query: 301 GDLEWPLQVSLSGG--NIDAENRLARWGLDDIWRIVWMTLIFGALMPLSRSAWALRKNYSLAMWLHMSLGAGIFFDSWRRKTHPHVWFLNTPV-LLWYLADKFWCSTRGRRG 627
G E+PL G +ID+ N +DD++RI+ MTL+ LMPLS W +++ Y + LH + F D RR THPH W NTP +LW L R RRG
Sbjct: 3 GTFEYPLSERKPEGFKDIDSANEKIMLQVDDVFRIIEMTLLLCVLMPLS--IWWMQQYYHVGKHLHGFIAILYFIDIVRRHTHPHSWIFNTPFFVLWLLDVAVQSYFRYRRG 112 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig776.19015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig776.19015.1 >prot_F-serratus_M_contig776.19015.1 ID=prot_F-serratus_M_contig776.19015.1|Name=mRNA_F-serratus_M_contig776.19015.1|organism=Fucus serratus male|type=polypeptide|length=211bp DGLGCLKEGPWSVKVFDFIARASARLIISTTNLMFATMCHGTWNYLSEVEback to top mRNA from alignment at F-serratus_M_contig776:146651..148624- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig776.19015.1 ID=mRNA_F-serratus_M_contig776.19015.1|Name=mRNA_F-serratus_M_contig776.19015.1|organism=Fucus serratus male|type=mRNA|length=1974bp|location=Sequence derived from alignment at F-serratus_M_contig776:146651..148624- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig776:146651..148624- >mRNA_F-serratus_M_contig776.19015.1 ID=mRNA_F-serratus_M_contig776.19015.1|Name=mRNA_F-serratus_M_contig776.19015.1|organism=Fucus serratus male|type=CDS|length=1266bp|location=Sequence derived from alignment at F-serratus_M_contig776:146651..148624- (Fucus serratus male)back to top |