prot_F-serratus_M_contig1251.1901.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1251.1901.1
Unique Nameprot_F-serratus_M_contig1251.1901.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length55
Homology
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A2R4QQ35_9PHAE (50S ribosomal protein L21 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ35_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 2.110e-23
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKK 45
            MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKK
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKK 45          
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A0R6M4T4_UNDPI (50S ribosomal protein L21, chloroplastic n=25 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4T4_UNDPI)

HSP 1 Score: 86.7 bits (213), Expect = 7.500e-21
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKKQIFLLDN 52
            MEYAIIEASGRQFWVEPKKFIEFNRL LK+GSTI+I+RVLFVK+K+  L+  
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRVLFVKQKKNTLIGQ 52          
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A141BSP2_9PHAE (50S ribosomal protein L21, chloroplastic n=14 Tax=Sargassum TaxID=3015 RepID=A0A141BSP2_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.120e-20
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKK 45
            MEYAIIEASGRQFWVEP KFIE NRLPL++GSTI+IKR+LFVKKK
Sbjct:    1 MEYAIIEASGRQFWVEPNKFIELNRLPLRIGSTILIKRILFVKKK 45          
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A8F0JZ48_9PHAE (Ribosomal protein L21 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZ48_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.140e-20
Identity = 40/52 (76.92%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKKQIFLLDN 52
            MEYAIIEASGRQFWVEPKKFIEFNRL LK+GST++I+RVLFVKK+   L+  
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTVLIRRVLFVKKEANTLIGR 52          
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A1L2F1Q6_9PHAE (Ribosomal protein L21 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1Q6_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 9.190e-20
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKK 45
            MEYAIIEASGRQFWVEP KFIE NRLPL++GS I+IKR+LFVKKK
Sbjct:    1 MEYAIIEASGRQFWVEPNKFIELNRLPLRIGSIILIKRILFVKKK 45          
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A1I9LVJ3_9PHAE (50S ribosomal protein L21, chloroplastic n=10 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVJ3_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.750e-19
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKK 45
            MEYAIIEASGRQFWVEPKKFIEFNRL LK+GSTI+I+R+LF K K
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNRLILKIGSTILIRRILFAKNK 45          
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A2I4Q2A5_9PHAE (50S ribosomal protein L21, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A5_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.460e-19
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKK 44
            MEYAIIEASGRQFW+EPKKF+EFNRL L +GSTII+KR+LFVKK
Sbjct:    1 MEYAIIEASGRQFWIEPKKFVEFNRLLLHIGSTIILKRILFVKK 44          
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A8F0F7S8_9PHAE (Ribosomal protein L21 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7S8_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.170e-17
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKK 45
            MEYAIIEASGRQFWVEPKKFIEFN L +K+GSTI+I+RVLF K +
Sbjct:    1 MEYAIIEASGRQFWVEPKKFIEFNXLIIKIGSTILIRRVLFFKNE 45          
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A8F0JYD6_9PHAE (Ribosomal protein L21 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYD6_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 4.750e-17
Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKK 44
            MEYA+IEASGRQFWVEPKKFIEFNRL + +GST+I++R+LF+ K
Sbjct:    1 MEYAVIEASGRQFWVEPKKFIEFNRLLINIGSTLIMQRILFMNK 44          
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Match: A0A8E5BG87_9PHAE (Ribosomal protein L21 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BG87_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 9.570e-17
Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKKQIFLLDN 52
            M+YAI+EASGRQFWVEP KF E NRL  KVGST+I KRVLF+ KK + L+  
Sbjct:    1 MKYAILEASGRQFWVEPTKFFELNRLSRKVGSTLIFKRVLFLNKKGVCLIGQ 52          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1251.1901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ35_9PHAE2.110e-23100.0050S ribosomal protein L21 n=3 Tax=Fucaceae TaxID=3... [more]
A0A0R6M4T4_UNDPI7.500e-2178.8550S ribosomal protein L21, chloroplastic n=25 Tax=... [more]
A0A141BSP2_9PHAE1.120e-2086.6750S ribosomal protein L21, chloroplastic n=14 Tax=... [more]
A0A8F0JZ48_9PHAE2.140e-2076.92Ribosomal protein L21 n=1 Tax=Chorda asiatica TaxI... [more]
A0A1L2F1Q6_9PHAE9.190e-2084.44Ribosomal protein L21 n=1 Tax=Coccophora langsdorf... [more]
A0A1I9LVJ3_9PHAE1.750e-1984.4450S ribosomal protein L21, chloroplastic n=10 Tax=... [more]
A0A2I4Q2A5_9PHAE4.460e-1984.0950S ribosomal protein L21, chloroplastic n=1 Tax=D... [more]
A0A8F0F7S8_9PHAE1.170e-1780.00Ribosomal protein L21 n=2 Tax=Laminariales TaxID=2... [more]
A0A8F0JYD6_9PHAE4.750e-1775.00Ribosomal protein L21 n=1 Tax=Protohalopteris sp. ... [more]
A0A8E5BG87_9PHAE9.570e-1767.31Ribosomal protein L21 n=1 Tax=Phaeophyceae sp. Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028909Ribosomal protein L21-likePFAMPF00829Ribosomal_L21pcoord: 3..48
e-value: 1.9E-9
score: 37.7
IPR036164L21-like superfamilySUPERFAMILY141091L21p-likecoord: 3..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1251contigF-serratus_M_contig1251:118385..118549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1251.1901.1mRNA_F-serratus_M_contig1251.1901.1Fucus serratus malemRNAF-serratus_M_contig1251 118351..118656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1251.1901.1 ID=prot_F-serratus_M_contig1251.1901.1|Name=mRNA_F-serratus_M_contig1251.1901.1|organism=Fucus serratus male|type=polypeptide|length=55bp
MEYAIIEASGRQFWVEPKKFIEFNRLPLKVGSTIIIKRVLFVKKKQIFLL
DNHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028909L21p-like
IPR036164L21-like_sf