mRNA_F-serratus_M_contig776.19012.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: D7G5T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T0_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 3.000e-132 Identity = 195/314 (62.10%), Postives = 228/314 (72.61%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEMLRPFLYRWRTDNQWLHTVGGWTMSFWIVVHVWLLFLPWLAHGYKNVKVGGDFGWPLQVSLSGGNIDAENRLTRWGLDDIWRICWMTLIFGALMPLSRSAWALRKNYSLAMWLHMALGAGICFDSWRRKTHPHVWFLNTPVVLWYLADKLWCSTRGRRGNSFSSRRFVLDDDYMLLLWKGKDSPKRICDIFWLKRSGRFGNIAPRSGEMSHPFTTCSSHDVAMPSVDNSGASGAKTSNVLLTIEAPIKTDVSWPGHRFSLKRAS 942
D GCLK+GPWS K FD IAR SAR IISTT+LMF+TMCHGTWNYLSEV++LRPFLY WRTDN WLH++GGWTM W ++HV+ L LP + HG+KNV VGG PLQVSL+ N+D +N+L WG DDIWRI WMTLIF L PLSRSAWAL+KN++LAMWLH+ +G G FD+WRR+THPHVW LNTPV LWY+ADK+WC TRGR + + R LD+DYMLLLW ++ PKRICDIFWLK G EM+HPFTTCSSHD SG + KT TIE P T V W GHRF L +S
Sbjct: 161 DDPGCLKDGPWSAKTFDVIARISARFIISTTNLMFITMCHGTWNYLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSIFHGFKNVAVGGPVELPLQVSLAVSNVDLDNKLANWGYDDIWRIIWMTLIFCVLTPLSRSAWALKKNFTLAMWLHIGVGVGYFFDNWRRRTHPHVWILNTPVFLWYIADKVWCCTRGRVDDRAETTRISLDEDYMLLLWH-EEHPKRICDIFWLKHRDSDGT------EMAHPFTTCSSHDTPNKQATASGTAAVKT-----TIEVPTDTSVHWKGHRFLLASSS 462
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: D8LCP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP9_ECTSI) HSP 1 Score: 360 bits (923), Expect = 3.190e-111 Identity = 173/310 (55.81%), Postives = 201/310 (64.84%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEMLRPFLYRWRTDNQWLHTVGGWTMSFWIVVHVWLLFLPWLAHGYKNVKVGGDFGWPLQVSLSGGNIDAENRLTRWGLDDIWRICWMTLIFGALMPLSRSAWALRKNYSLAMWLHMALGAGICFDSWRRKTHPHVWFLNTPVVLWYLADKLWCSTRGRRGNSFSSRRFVLDDDYMLLLWKGKDSPKRICDIFWLKRSGRFGNIAPRSGEMSHPFTTCSSHDVAMPSVDNSGASGAKTSNVLLTIEAPIKTDVSWPGHRFSL 930
D GCLK GPWS K FD IARASAR IISTT+LMF+TMCHGTWN+LSEV++LRPFLY WRTDN WLH++GGWTM W ++HV+ L LP L HG+KNV VGG P QVSL+ N+D +N+L WG DDIWRI WMTLIF L+PLSRSAWAL+KN++LAMWLHM +G G FD+WRR+THPHVW LNTPV LWY+ADK+WCSTRG G EM+HPFTTCSSHD N A+ + T+ V IE P T V W GHRF L
Sbjct: 3 DDPGCLKAGPWSAKAFDAIARASARFIISTTNLMFITMCHGTWNFLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSLFHGFKNVAVGGPVELPFQVSLAVSNVDVDNKLANWGYDDIWRIFWMTLIFCVLIPLSRSAWALKKNFTLAMWLHMGVGIGYFFDNWRRRTHPHVWILNTPVFLWYIADKVWCSTRGSDGT-----------------------------------------------EMAHPFTTCSSHDTP-----NKPATLSDTTAVNTMIEVPTDTSVHWKGHRFLL 260
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: D7G5S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S9_ECTSI) HSP 1 Score: 262 bits (669), Expect = 1.960e-79 Identity = 130/205 (63.41%), Postives = 162/205 (79.02%), Query Frame = 2
Query: 1619 MAIIKIHRR-SDPKVREYSCMGYTHMMSSYRRTETAHMADLETTED-GGVPLRTYGPYRSEYGRLTEFPNVPPLLIIATGAGAALALDFIGYVRANKLEPVRPVTICYSSASLALLQFVTNTLLATRTPGIHIKTALTRHDDLELFDTSTERKDDLVIGRLDVMGIMEAASADTEVYFCGGGAVNRLLQTFCSKRGMKYAGSSVQ 2227
MAI++++RR S +C+G T +++ +R ETA +AD+E T D +PLR YGPYRSEYGRL EFPN+PPLLIIATGAGA L LDF+G+VRA K+ P RPV +CYSSASLALLQFVTNTLLA RTPGI ++TALTRH++LE+F+T+ + K +LVIGRLDV I+ S DTEVYFCGGG +N LL+ C+KRGMKY GS+VQ
Sbjct: 1 MAIVRLNRRTSQSSPCACTCIGLTWVLNIFRTPETASIADVEETNDLETIPLRVYGPYRSEYGRLEEFPNLPPLLIIATGAGAGLVLDFVGFVRAKKITPKRPVKVCYSSASLALLQFVTNTLLAERTPGIQVETALTRHEELEMFNTTNQPKPELVIGRLDVKSIIRGVSEDTEVYFCGGGGINTLLREACAKRGMKYVGSAVQ 205
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: D7G5S8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S8_ECTSI) HSP 1 Score: 263 bits (673), Expect = 2.730e-77 Identity = 123/233 (52.79%), Postives = 153/233 (65.67%), Query Frame = 1
Query: 298 GGDFGWPLQ-VSLSGGNIDAENRLTRWGLDDIWRICWMTLIFGALMPLSRSAWALRKNYSLAMWLHMALGAGICFDSWRRKTHPHVWFLNTPVVLWYLADKLWCSTRGRRGNSFSSRRFVLDDDYMLLLWKGKDSPKRICDIFWLKRSGRFGNIAPRSGEMSHPFTTCSSHDVAMPSVDNSGASGAKTSNVLLTIEAPIKTDVSWPGHRFSLKRASSFHLTYYTTTIPPLRSY 993
GGDF + V L N+D +N+L WG DD+WR+ WMTLIF L PLSRS WAL+KN+SLAMWLH+ +G G FD+WRR+THPHVW LNTPVVLWY+ADK+WC T GR + + R LD+DYMLLLW +D PK ICDIFWLK S R + R+GE++HPFTTCSSHD A+ S IE P++TDV+W GHRF L S +T+ R++
Sbjct: 38 GGDFFCDMDDVGLMASNVDVQNKLANWGYDDVWRLIWMTLIFCVLTPLSRSVWALKKNFSLAMWLHIGVGMGYFFDNWRRRTHPHVWILNTPVVLWYIADKIWCCTEGRVNHRAETTRIKLDEDYMLLLWN-EDQPKSICDIFWLKHSDRDSKGSRRTGEVAHPFTTCSSHDTAVGHTSPEAGISTVGSPGRPNIEVPLETDVNWKGHRFLLTSGISQRSNALESTLRSSRAF 269
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: A0A6H5JCC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCC2_9PHAE) HSP 1 Score: 139 bits (350), Expect = 5.140e-34 Identity = 90/224 (40.18%), Postives = 119/224 (53.12%), Query Frame = 2
Query: 1676 MGYTHMMSSYRRTETAHMADLETTEDGGV-PLRTYGPYRSEYGRLTEFPNVPPLLIIATGAGAALALDFIGYVRANKLEPVRPVTICYSSASLALLQFVTNTLLATRTPGIHIKTALTRHDDLELFDTSTERKDDLVIGRLDV---------------------------------------MGIMEAASADTEVYFCGGGAVNRLLQTFCSKRGMKYAGSSVQ 2227
MG T ++S +R T+ + +LE + LRT+GPYRSEYGRL EFP++PPLL A+A F Y +SSASLALLQFVTNTLLA R+PGIHI+TALTRH+D+++ ++ + +LV+G LD+ I+ S +TEVYFCGGG VN L C++RG+KY G SVQ
Sbjct: 1 MGLTFILSIFRDPVTSSIPELEAAQRNPTFQLRTFGPYRSEYGRLVEFPHLPPLL---GQQHCAIAAGFGVY---------------HSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDVQIVGDTSGPEPELVMGHLDIKHDTTDSNSLFAGYVRRYDKFVNPRWRALPLVFACLVLPQTIIGEVSQETEVYFCGGGGVNAPLCETCARRGIKYVGRSVQ 206
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: A0A7S1AZW1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AZW1_NOCSC) HSP 1 Score: 123 bits (308), Expect = 1.920e-25 Identity = 76/248 (30.65%), Postives = 120/248 (48.39%), Query Frame = 1
Query: 16 LKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEMLRPFLYRWRTDN----QWLHTVGGWTMSFWIVVHVWLLFLPWLAHGYKNVKVGGDFGWPL-QVSLSGGNIDAENRLTRWGLDDIWRICWMTLIFGALMPLSRSAWALRKNYSLAMWLHMALGAGICFDSWRRKTHPHVWFLNTPVVLWYLAD----KLWCSTRGRRGNSFSSRRFVLDDDYMLLLWKGKDSPKRICDIFWLK 732
LK GPW+V ++D +AR S R + ++ +++ TM H T L E R L + ++ +WLH V G+ F ++ HV+ + P HGY G PL + + G ++D E +L DD+WR+ MTL F L P S LR NY + + LH + D RR +HPH W LN PV ++AD W R + +++RR + ++++ +W S +F L+
Sbjct: 154 LKLGPWTVPLYDVVARISGRFLTTSLNILMWTMMHTTHRVLQESWFARCGLVDFAQESDESRRWLHNVNGYLSGFLVLFHVYSILFPVFLHGYSAYVTPGSLALPLSERRIEGTDVDNEGKLMGLQGDDVWRLIEMTLFFVILFPWSLRL--LRCNYRVGIQLHRWVFILYFIDIARRHSHPHNWVLNVPVFFLWVADVAVGNWW------RVHKYAARRQRVSSEHVVCMWSSDTSLDTSGPLFLLR 393
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: A0A7S0TH34_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TH34_9EUKA) HSP 1 Score: 106 bits (264), Expect = 1.180e-20 Identity = 87/323 (26.93%), Postives = 151/323 (46.75%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEMLRPFLYRW---RTDNQWLHTVGGWTMSFWIVVHVWLLFLPWLAHGYKNVKVGGDFGWPLQVSLSGGNID--AENRLTRWGLDDIWRICWMTLIFGALMPLSRSAWALRKNYSLAMWLHMALGAGICFDSWRRKTHPHVWFLNTPVVLWYLADKLWCSTRGRRGNSFSSRRFVLDDDYMLLLWKGKDSPKR------ICDIFWLKRSGRFGNIAPRSGEMSHPFTTCSSHDVAMPSVDNSGASGAKTSNVLLTIEAPIKTDVSWPGHRFSLKR 936
D G G + V F IA S+R+++ ++S +FL C WN+ E E + +L +++N + VG W + +V+HVW++ A ++ V + P + G +I A+N L+ G++D++RI +L F L+P S + +N++ A + H D R +HPH WF N P + W++ D+L+ RR + R+ LDD+Y +L + P+R I D+F++ N+ + + +HPFT +H A G N ++ E D W GH+F+++R
Sbjct: 86 DSPGPTIPGNFGVTCFALIAWISSRMMLVSSSYIFLFQCRIFWNWFVEREWVHRYLKIGDIHQSNNSIHYYVGIWLVGVPVVLHVWVILFA-AALPQNDIYVYSSWMRPYDA-VKGKSIAFYADNLLSL-GINDVYRIVSTSLTFFVLIPYSIIKFTRDRNWTFAQYCHYTGALIYTVDLVRMTSHPHCWFFNVPFIFWWICDRLYGIFFYRRCVANVVRKVRLDDEYTVLYLR---IPERLHQLHMIGDVFYI-------NVVDCAFDRAHPFTVFQNH-----------ARG----NAMINDEMHGVPD--WSGHKFAVRR 378
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: UPI000C03E7C8 (uncharacterized protein LOC111331484 isoform X1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03E7C8) HSP 1 Score: 84.7 bits (208), Expect = 3.530e-13 Identity = 70/259 (27.03%), Postives = 123/259 (47.49%), Query Frame = 1
Query: 67 SARLIISTTSLMFLTMCHGTWNYLSEVEMLRPFLYRWRTDNQWLHTVGG-WTMSFWIVVHVWLLFLPWLAHG----------YKNVKVGGDFGWPL---QVSLSGGNIDAENRLTRWGLDDIWRICWMTLIFGALMPLSRSAWALRKNYSLAMWLHMALGAGICFDSWRRKTHPHVWFLNTPVVLWYLADKLWCSTRGRRGNSFSSRRFVLDDDYMLLLWKGKDSPKR--ICDIFWLKRSGRFGNIAPRSGEMSHPFTT 795
+AR+II++ +LMF TM N++ E + R + +H G + ++ V HV L+F+P L G + K W +L G + +++ D+I+R + +IF ++PLSRS +A +++YSLAM LH+ G D+ R+ TH N P+++ + DK+ RR R+ V+ D+ ++++ DS + + D+++L G + P + SHPFTT
Sbjct: 323 TARMIITSQNLMFYTMMCCLPNFICETAPNWITIDGIRNVHSRIHAFAGIFLLAIPSVAHVLLIFVPPLIDGTQLLYYPPSTFNYSKYPDHLNWTKFWDPAALQGWTFN-DHKGVHLTSDEIYRFMLVIVIFCLIVPLSRSNYANKRSYSLAMALHVFAGIWYAIDNIRKITHGLSQVANLPILVLWCIDKILSILYYRRNCGHVVRKEVVGDNEYVIMYVKLDSNVKHAVGDVYYLLHKGENTGMLP---QRSHPFTT 577
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: A0A3M6UDP3_POCDA (EF-hand domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UDP3_POCDA) HSP 1 Score: 82.4 bits (202), Expect = 1.880e-12 Identity = 76/263 (28.90%), Postives = 121/263 (46.01%), Query Frame = 1
Query: 67 SARLIISTTSLMFLTMCHGTWNYLSEVEMLRPFLYRWRTDNQWLHTVGG-WTMSFWIVVHVWLLFLPWLAHG----------YKNVKVGGDFGW-----PLQVSLSGGNIDAENRLTRWGLDDIWRICWMTLIFGALMPLSRSAWALRKNYSLAMWLHMALGAGICFDSWRRKTHPHVWFLNTPVVLWYLADKLWCSTRGRRGNSFSSRRFVLDDDYMLLLWKGKDSPKR--ICDIFWL--KRSGRFGNIAPRSGEMSHPFTT 795
+ARLII++ +LMF TM N + E+ + R + +HT G + ++ + HV ++FLP L G + + W P V N LT D+I+R + +IF +PLSRS +A +++YSLAM LH+ G D+ R+ TH N P+++ + DK+ RR RR VL D+ ++++ DS + + D+++L R G + RS HPFTT
Sbjct: 353 TARLIITSQNLMFYTMMSCLPNLICEIAPNWVTIDGIRNVHTRIHTFAGIFLLAIPSLAHVLIIFLPPLIDGTQLKYYPPSTFNYSEYPDHLNWTKFWDPAAVQGWTFNDHKGVHLTS---DEIYRFMLVIVIFCLFVPLSRSNYANKRSYSLAMALHVFAGIWYAIDNIRKITHGLSQVANLPILVLWCIDKILSILCYRRNRGHIVRREVLGDNEYVIMYVKLDSDVKHAVGDVYYLLHTRKENTGMLPQRS----HPFTT 608
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Match: A0A1E7FFB7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFB7_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.380e-6 Identity = 49/161 (30.43%), Postives = 70/161 (43.48%), Query Frame = 1
Query: 1 DGLGCLKEGPWSVKVFDFIARASARLIISTTSLMFLTMCHGTWNYLSEVEMLRPFLY--RWRTDNQWLHTVGGWTMSFWIVVHVWLLFLPWLAHGYKNVKVGGDFGWPLQ----VSLSGGNID------AENRLTRWGL--DDIWRICWMTLIFGALMPLS 441
D + K GPWSV ++D IAR S R I +L+ LT + + + L N LH G + ++HVW + P + HGY + G+F WP+ S D A L + GL DD++R+ MTL LMP+S
Sbjct: 132 DRMEGYKPGPWSVVLYDCIARISGRYSIVCYNLLLLTRMECLEDIFLNSFISKNVLNCTNMVNANIRLHVYNGIALCVLTLLHVWSILFPCIFHGYTAKVILGNFEWPVSERTPTKCSVEEFDGCWPGDANVELKQMGLQADDVFRMVEMTLFLAILMPIS 292 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig776.19012.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig776.19012.1 >prot_F-serratus_M_contig776.19012.1 ID=prot_F-serratus_M_contig776.19012.1|Name=mRNA_F-serratus_M_contig776.19012.1|organism=Fucus serratus male|type=polypeptide|length=374bp MFLTMCHGTWNYLSEVEMLRPFLYRWRTDNQWLHTVGGWTMSFWIVVHVWback to top mRNA from alignment at F-serratus_M_contig776:51910..60940+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig776.19012.1 ID=mRNA_F-serratus_M_contig776.19012.1|Name=mRNA_F-serratus_M_contig776.19012.1|organism=Fucus serratus male|type=mRNA|length=9031bp|location=Sequence derived from alignment at F-serratus_M_contig776:51910..60940+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig776:51910..60940+ >mRNA_F-serratus_M_contig776.19012.1 ID=mRNA_F-serratus_M_contig776.19012.1|Name=mRNA_F-serratus_M_contig776.19012.1|organism=Fucus serratus male|type=CDS|length=2244bp|location=Sequence derived from alignment at F-serratus_M_contig776:51910..60940+ (Fucus serratus male)back to top |