prot_F-serratus_M_contig772.18979.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig772.18979.1
Unique Name	prot_F-serratus_M_contig772.18979.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	404

Homology

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BLAST of mRNA_F-serratus_M_contig772.18979.1 vs. uniprot
Match: D8LT40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT40_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.270e-13
Identity = 82/276 (29.71%), Postives = 119/276 (43.12%), Query Frame = 0

Query:    3 RDDSTGYSALHFAVFYCRSSVVRVLLLAGANTRATDNYGRIPGARYQPSSYLSFSGFQQRRTIRRFLAGDLQDGMDEKGKTMFPMHAPLEAYDEDHKPQYVRAGSSRLMEAGADQSLDGYSERTSTINKSGNKRTRSLEPTIRHRSSDITRKADTGIIYLDSNEPENFSDEKETVRASEKRYKRRKRNGASAQATRRGGTGVLYYLSRAFLWNALSEKNSSGCRGDADECGADGRSGNGSRGRSNDSETAG-------SNVKYYLRRGSAKSMSFV 271
            RDD+TG+S LHFA +YCRSSVVRVL+LAGA+T+ATDN G+ PG R+Q  SYLS                        +G T           +ED +P   + GS+R                TS+                R  S+DI R+A   +  + S   +   D        E+      R G +  +   GG  V YYL R  L  A ++       GD+++  +  ++   +R RS+    +G       S V +YLRR S + + F+
Sbjct:  536 RDDATGFSPLHFAAYYCRSSVVRVLVLAGADTQATDNAGKAPGERFQAVSYLS------------------------QGST-----------EEDERPS--KHGSNRSSSXXXXXXXXXXXXXTSS----------------RRASADIARRAYATMQTMHSGVDDGSVDR-------ERGKSEVSRGGGAGDSNPAGG--VRYYLRRGSLQQAANKTREMMTAGDSNDIRSQ-KASTSNRSRSSSRPVSGGGGSGRESGVSFYLRRASLQGVPFL 748

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BLAST of mRNA_F-serratus_M_contig772.18979.1 vs. uniprot
Match: A0A836CHF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF3_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.800e-12
Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 0

Query:   10 SALHFAVFYCRSSVVRVLLLAGANTRATDNYGRIPGARYQPSSYLSFSGFQQRRTIRRFLAGDLQDGMDEKGKTMFPMHAPLEAYDEDHKPQYV----RAGSSRLMEAGADQSLDGYSERTSTI 129
            +ALH A ++CR ++VR+L+  GA+    D  GR PG  +  ++ +   G  +RR I +FL+G+L+      G  +FP HAPLEAYDE+HKP  +      GS+      A   +  Y  R S +
Sbjct:  331 TALHLACYHCRPAIVRLLVERGADVGIVDAEGRAPGRVFTVAALIRCGGLTERRQILQFLSGNLECDRGTHGP-VFPTHAPLEAYDEEHKPAIILPKPHKGSTDAPRLSAGGGIHYYLRRASML 453

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig772.18979.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig772.18979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LT40_ECTSI	1.270e-13	29.71	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CHF3_9STRA	1.800e-12	36.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..50 e-value: 6.3E-7 score: 30.9
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 5..44
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 7..39 score: 11.434
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 1..44 score: 11.983

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig772	contig	F-serratus_M_contig772:255877..259367 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig772.18979.1	mRNA_F-serratus_M_contig772.18979.1	Fucus serratus male	mRNA	F-serratus_M_contig772 255877..259369 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig772.18979.1 ID=prot_F-serratus_M_contig772.18979.1|Name=mRNA_F-serratus_M_contig772.18979.1|organism=Fucus serratus male|type=polypeptide|length=404bp
ELRDDSTGYSALHFAVFYCRSSVVRVLLLAGANTRATDNYGRIPGARYQP
SSYLSFSGFQQRRTIRRFLAGDLQDGMDEKGKTMFPMHAPLEAYDEDHKP
QYVRAGSSRLMEAGADQSLDGYSERTSTINKSGNKRTRSLEPTIRHRSSD
ITRKADTGIIYLDSNEPENFSDEKETVRASEKRYKRRKRNGASAQATRRG
GTGVLYYLSRAFLWNALSEKNSSGCRGDADECGADGRSGNGSRGRSNDSE
TAGSNVKYYLRRGSAKSMSFVPNRLIANDEDDGKGGNDAGALGRNGNDDA
VAMAMAAAVSAVAADTPGESSKSRNGEEDITLDHLEAGRPRRRRSSCGSD
TGGIGGRESAIAGQRLSMKFFVGIQKRAKGLATQFTAKKGVDSSKEDSYG
LRES

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom