mRNA_F-serratus_M_contig772.18973.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig772.18973.1 vs. uniprot
Match: D8LT37_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT37_ECTSI) HSP 1 Score: 504 bits (1299), Expect = 2.170e-166 Identity = 319/640 (49.84%), Postives = 396/640 (61.88%), Query Frame = 1
Query: 469 MPGPDKKALVLQLADWDPIKRVQVLTAWEAADPKMSADDLVNLMRQEQARGGDKLGSLWRCSLCSIKRKLEMEAKLKWDVHRRKGSTVRAGRCPTTGVLYDFRSK-SRGAIDVYRSPHESPFGFAPPRKTGLNDRRRRDPERDVGTGTKTEKPPPREACDSFEVSDATGACAGISISSARSVVSEAANEALVKKTPPRNHRHQSPAGLGGTTSVRGDEPPRSTSPTPTYAGREFDPCRLCKACIIEWRSAIIFRGHDLELWHAVDDERRALLELQGRNDIFKAEWVKREWRDRQVSELLRFIVEANLDSSSRHSLEEREKAARSTQSAELRRMLDLKLSYKAAVENGAAKDEGLKRLSERRASTWASTLRLKASLNLDRHYASLESGGLPASLERKHNTSTKRSDFLADGTPVTPQGAKQAFGRASPDADDESKKIRQWKSEAQAKEEVFERRREVRAWQLLRGRQARFEYLSGRWVKAARDIEENQRQTRMLKVVKCERRVREQQAAKLERMRQLAXXXXXXXXXXXXXXXXRLERDREVEERTKCESRELELMRREEAAQLAGGDRRVCNFSGVLFWGLVHEMQRLRAVEEKQRLAWEARVKSTREKMIAVRCISKLSHFGYALTPKDPQLAQKIEVL 2385
M DKK L+LQLADW+P+++V+V+ AWEA DP M+A L+ L+R+EQARG + SLW+CSLC +KR +E+EA++K HRRK T+ AG LYD+R K S G D Y S HES F F R L E P +E TG AG + T P LGG R E T+ +G K C+ RSAII GHDLELWH VD ERRALL Q R D+ KA W +RE +DRQVSELLR I EANLD+ SRHSLE+R AA++ Q ++RRMLDLKLS+ AAV +GA KDEGLKRL+ER A+ WA+ L+LKA+LN+DRHYASLE GGLPASL R++ TS++ SDFL DGTP TPQGA Q FGRA P D+ES IR WK A+ EEV + RR+VR WQ GR+ARF L RWV A DIEE QRQ RM++ + E+R+RE+QAAKL R RQLA ++ERD+E EER + E ELE M REEAAQLAGGDR +WGL+ E+QRLR +EE++R AWE R+++T+EKM+AVRCIS+LS F +A P DP+L Q+I+ L
Sbjct: 1 MSQQDKKILLLQLADWNPVRKVKVMKAWEATDPAMTAGFLLELIREEQARG-EGPDSLWQCSLCPVKRNVEVEARMKRGEHRRKDRTIDAGS------LYDYRVKGSGGGPDTYSSAHESLFEFKQQRHQHLQQ---------------DESP--------WE----TGGTAG--------------GAGAAEGTKP----------LGGAQKTRYVEDRAGTA-----SGAGDLASSPAKECLD--RSAIISSGHDLELWHTVDHERRALLTGQRRADVLKARWAERERKDRQVSELLRLISEANLDAFSRHSLEDRAMAAQNLQVVDVRRMLDLKLSHSAAVNSGACKDEGLKRLNEREATAWAAKLKLKAALNMDRHYASLEPGGLPASLRRRNPTSSQPSDFLDDGTPATPQGAMQTFGRACPPEDNESGAIRLWKRGAKETEEVLDLRRDVREWQSSCGRRARFSDLCERWVGVASDIEEKQRQKRMIEAAEREKRMRERQAAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEERKRLEGEELERMSREEAAQLAGGDR---------YWGLIRELQRLRVIEEERRRAWEVRIRATKEKMVAVRCISELSDFTHATPPIDPELQQQIDRL 566 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig772.18973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig772.18973.1 >prot_F-serratus_M_contig772.18973.1 ID=prot_F-serratus_M_contig772.18973.1|Name=mRNA_F-serratus_M_contig772.18973.1|organism=Fucus serratus male|type=polypeptide|length=767bp MGSVDAKARNTLQEVVRLIAISGKDTRLSVKEILVHACANLDVDRCVSLLback to top mRNA from alignment at F-serratus_M_contig772:174624..204152+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig772.18973.1 ID=mRNA_F-serratus_M_contig772.18973.1|Name=mRNA_F-serratus_M_contig772.18973.1|organism=Fucus serratus male|type=mRNA|length=29529bp|location=Sequence derived from alignment at F-serratus_M_contig772:174624..204152+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig772:174624..204152+ >mRNA_F-serratus_M_contig772.18973.1 ID=mRNA_F-serratus_M_contig772.18973.1|Name=mRNA_F-serratus_M_contig772.18973.1|organism=Fucus serratus male|type=CDS|length=4602bp|location=Sequence derived from alignment at F-serratus_M_contig772:174624..204152+ (Fucus serratus male)back to top |