mRNA_F-serratus_M_contig7701.18962.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7701.18962.1
Unique NamemRNA_F-serratus_M_contig7701.18962.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: A0A097IUQ0_9PHAE (Malate dehydrogenase n=8 Tax=Sargassum TaxID=3015 RepID=A0A097IUQ0_9PHAE)

HSP 1 Score: 613 bits (1581), Expect = 9.880e-218
Identity = 310/349 (88.83%), Postives = 332/349 (95.13%), Query Frame = 3
Query:   45 MSVVARSRSVAKLAAPMASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKNN 1091
            MSVV R+R +AK+AAPM S+A  + SVR+FSGT R QNKVTVVGAAGGIGQPMSLL+KLSGKIDHLSLFDIVN+PGVAADI HCN+KGKV+GYKGAEEMAA+LDGSD+VVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKAC+LIISNPVNSTVPIFA+VLKASGVY+PAKLMGVTTLDV RAKTFVAENQGMDVDK++VDVIGGHAGTTIMPLLSQVKGANFTEEDIK LTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKG+KEC FVES LT APFFASPCTLGTEGVSE+H YGQLSPFEQ+LVDENVPAL+KM+ KG DFVKNN
Sbjct:    1 MSVVTRTRPLAKMAAPMVSRAVGISSVRAFSGTPRVQNKVTVVGAAGGIGQPMSLLMKLSGKIDHLSLFDIVNTPGVAADIGHCNSKGKVMGYKGAEEMAASLDGSDVVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFAEVLKASGVYDPAKLMGVTTLDVARAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQVKGANFTEEDIKTLTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGIKECTFVESPLTSAPFFASPCTLGTEGVSEIHGYGQLSPFEQALVDENVPALVKMSQKGIDFVKNN 349          
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: D8LQM3_ECTSI (Malate dehydrogenase n=7 Tax=Eukaryota TaxID=2759 RepID=D8LQM3_ECTSI)

HSP 1 Score: 579 bits (1492), Expect = 3.370e-204
Identity = 295/349 (84.53%), Postives = 323/349 (92.55%), Query Frame = 3
Query:   45 MSVVARSRSVAKLAAPMASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKNN 1091
            MS VAR +  +K+AAPMASKA  V S R F+GT R QNKVTVVGAAGGIGQPMSLLLKLSGK++HLSLFDIVN+PGVAADISHCN+KGKV G+KGAEEMA ALDG+D+VVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQC+KSCPKAC+LIISNPVNSTVPIFADVLKA+GVYNP KLMGVTTLDV RA+TF+AENQGMDVDK+ V VIGGHAGTTIMPLLSQV+GA F++EDIKALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA KVLDGLNGV+GV ECAFVES LTEAPFFASPCTLG +GVS+VH +G LS FEQ+LVD+NVPAL+KMA KGSDFVKNN
Sbjct:    1 MSAVARIQLASKVAAPMASKALGVSSSRFFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKVEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMATALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAQTFIAENQGMDVDKLDVTVIGGHAGTTIMPLLSQVEGAKFSDEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVEGVTECAFVESDLTEAPFFASPCTLGKDGVSKVHGFGNLSSFEQALVDDNVPALVKMAQKGSDFVKNN 349          
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: A0A097IUN2_SACJA (Malate dehydrogenase n=3 Tax=Laminariales TaxID=2886 RepID=A0A097IUN2_SACJA)

HSP 1 Score: 573 bits (1478), Expect = 4.530e-202
Identity = 296/349 (84.81%), Postives = 318/349 (91.12%), Query Frame = 3
Query:   45 MSVVARSRSVAKLAAPMASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKNN 1091
            MS +AR + +AKLAAPMASKA  V S R+F+GT R QNKVTVVGAAGGIGQPMSLLLKLSGKI+HLSLFDIVN+PGVAADISHC+ K KV G+KGAEEM AALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQ +KSCP AC LIISNPVNSTVPIFADVLKA+GVYNP KLMGVTTLDVVRAKTFVAE+QGMDV KIKVDVIGGHAGTTIMPLLSQVKGA FTEEDI ALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA +VLDGLNG K VKEC FV+  LT+APFFASPCTLGT+GVS++H +  L+PFEQSLVDENVP+LI MA KGSDFVKNN
Sbjct:    1 MSAIARVQPLAKLAAPMASKALGVSSSRAFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCDAKAKVTGHKGAEEMGAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQVSKSCPNACILIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVVRAKTFVAEHQGMDVSKIKVDVIGGHAGTTIMPLLSQVKGAKFTEEDIAALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGKKNVKECTFVDCDLTDAPFFASPCTLGTDGVSKIHGFSNLTPFEQSLVDENVPSLISMAKKGSDFVKNN 349          
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: A0A097IUP2_9PHAE (Malate dehydrogenase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUP2_9PHAE)

HSP 1 Score: 564 bits (1453), Expect = 2.960e-198
Identity = 285/347 (82.13%), Postives = 313/347 (90.20%), Query Frame = 3
Query:   51 VVARSRSVAKLAAPMASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKNN 1091
            + AR + VA++ AP+A KA  V + RSF+ + R +NKV VVGAAGGIGQPMSLL+KLSGKI+HLSLFDIVN+PGVAAD+SHCNTKGKV  +KG EEM AALDG D+VVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCP AC+LIISNPVNSTVPIF DVLK +GV++P KLMGVT LD+ RA TFVAENQGMDVDK+ VDVIGGHAGTTIMPLLSQVKGA F+EEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAE+VLDGLNG  GVKEC FVES+LT+AP+FASPCTLG EGVSEVH +G LSPFEQSLVDENVPALIKMA KG+DFVKNN
Sbjct:    4 LTARIQPVARMVAPVALKALGVSATRSFTASARAKNKVAVVGAAGGIGQPMSLLMKLSGKIEHLSLFDIVNTPGVAADLSHCNTKGKVSAHKGPEEMGAALDGCDLVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPNACFLIISNPVNSTVPIFGDVLKTAGVFDPRKLMGVTMLDICRANTFVAENQGMDVDKVSVDVIGGHAGTTIMPLLSQVKGAKFSEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAERVLDGLNGATGVKECTFVESSLTDAPYFASPCTLGKEGVSEVHGFGTLSPFEQSLVDENVPALIKMAKKGTDFVKNN 350          
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: A0A097IUM6_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM6_9PHAE)

HSP 1 Score: 562 bits (1448), Expect = 1.640e-197
Identity = 288/349 (82.52%), Postives = 317/349 (90.83%), Query Frame = 3
Query:   45 MSVVARSRSVAKLAAPMASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKNN 1091
            MS +AR +  ++LAAP+ASKA  V + RSF+GT R QNKVTVVGAAGGIGQPMSLLLKLSGKI+HLSLFDIVN+PGVAADISHCN+KGKV G+KGAEEMA ALDG+DIVVIPAGVPRKPGMTRDDLFNTNASIVKGIA+QC+KSCP AC+LIISNPVNSTVPIFADVLKA+GVYNP KLMGVTTLDV RAKTFVAENQGMDVDK+ V V+GGHAGTTIMPLLSQV+GA F+EEDIKALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA KVLDGLNGV+GVKECAFVES LT+APFFASP +LG +GVS+VH +  LS FEQSLVDENVPAL+K A     FVK+N
Sbjct:    1 MSAIARVQMASRLAAPIASKAVGVSAARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMATALDGADIVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPNACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVEGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSKVHGFSNLSAFEQSLVDENVPALMKQAXXXXXFVKSN 349          
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: A0A097IUM5_9PHAE (Malate dehydrogenase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUM5_9PHAE)

HSP 1 Score: 561 bits (1445), Expect = 4.700e-197
Identity = 284/349 (81.38%), Postives = 318/349 (91.12%), Query Frame = 3
Query:   45 MSVVARSRSVAKLAAPMASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKNN 1091
            MS VAR+  + ++AAP ASKA  V + RSF+GT R QNKV VVGAAGGIGQ MSLLLKLSGKI HLSLFDIVN+PGVAADISHCN++GKV G+KGAEEM  ALDG+DIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQC+KSCP AC+LIISNPVNSTVPIF DVLKA+GV+NPAKLMGVT+LDVVRAKTFVAE+QG+DV K+KVDVIGGHAGTTI+PLLS+VKGA+FTEEDIKALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA +VLDGLNGVK VKEC FVE  LT+APFFASPCTLG +GVS++H + +L+PFEQ+LVD+NVP LI MA KGS+FVKNN
Sbjct:    1 MSAVARASPLVRMAAPTASKAIGVSAARSFTGTARAQNKVAVVGAAGGIGQSMSLLLKLSGKIGHLSLFDIVNTPGVAADISHCNSEGKVTGHKGAEEMGTALDGADIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCSKSCPNACFLIISNPVNSTVPIFGDVLKANGVFNPAKLMGVTSLDVVRAKTFVAEHQGLDVSKMKVDVIGGHAGTTIIPLLSKVKGADFTEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKNVKECTFVECDLTDAPFFASPCTLGKDGVSKIHGFSKLTPFEQALVDDNVPTLINMAKKGSEFVKNN 349          
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: A0A097IUI7_9PHAE (Malate dehydrogenase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IUI7_9PHAE)

HSP 1 Score: 536 bits (1380), Expect = 3.930e-187
Identity = 271/348 (77.87%), Postives = 307/348 (88.22%), Query Frame = 3
Query:   48 SVVARSRSVAKLAAPMASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKNN 1091
            S+ +R  S+ ++AAP ASKA  + + R+F+ +   QNKV VVGAAGGIGQPMSLLLKLSGKI+HLSLFDIVN+PGVAADI HCNT GKV  + G EEM+ ALDG DIVVIPAGVPRKPGM+RDDLFNTNASIVKGIAEQCAKSCPKAC+LIISNPVNSTVPIFADVLK++GV++P KLMGVTTLDV RAKTFVAENQGMDVDK++VDVIGGHAGTTIMPLLSQ+ GA F++EDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFA +VLDGL+G   +KEC FVE  +T+APFFASPCTLG EGVSE+H +  LS FEQ+LVD+NV +L KMA KGSDFVKN+
Sbjct:    4 SIASRVSSITRMAAPTASKAVGISASRTFTSSTTAQNKVAVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADIGHCNTHGKVTSHTGPEEMSTALDGCDIVVIPAGVPRKPGMSRDDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFADVLKSAGVFHPGKLMGVTTLDVCRAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQIPGAKFSDEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAGRVLDGLDGQADIKECTFVECDITDAPFFASPCTLGKEGVSEIHGFKNLSSFEQALVDDNVDSLKKMAKKGSDFVKNS 351          
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: A0A835YGB7_9STRA (Malate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGB7_9STRA)

HSP 1 Score: 462 bits (1189), Expect = 3.170e-158
Identity = 235/335 (70.15%), Postives = 281/335 (83.88%), Query Frame = 3
Query:   78 KLAAPMASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFV 1082
            ++A+P+A++A  + + RSFS +   Q KVTVVGAAGGIGQP+SLLLKLSGK+DHLSL+D+V +PGVAAD+SHCNT GKV G+KGA E+ AAL  +D+VVIPAGVPRKPGMTRDDLFNTNA IVKGIAE CA++CPKA +LIISNPVNSTVPIFA+VLK  GVY+  KLMGVTTLDV RA+TFVAEN G  V+   VDVIGGHAGTTI+PLLSQV+GA F+++D++ALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFA +VL  + G   ++EC FVE+ LT AP+FA+P  LG +GV +V  +G+LS FEQ ++DENVPAL   A KG DFV
Sbjct:   10 RVASPLATRALGLEAARSFSSSRSAQAKVTVVGAAGGIGQPLSLLLKLSGKVDHLSLYDLVGTPGVAADLSHCNTNGKVTGHKGASELKAALQDADVVVIPAGVPRKPGMTRDDLFNTNAGIVKGIAEACAEACPKARFLIISNPVNSTVPIFAEVLKGRGVYDKKKLMGVTTLDVCRAQTFVAENLGQSVNDTAVDVIGGHAGTTILPLLSQVEGAKFSDKDLEALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAIRVLAAMEGEADIRECTFVENDLTAAPYFATPVILGKDGVEKVLGFGKLSAFEQKILDENVPALQAQAKKGVDFV 344          
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: A0A6V1QQG6_HETAK (Malate dehydrogenase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QQG6_HETAK)

HSP 1 Score: 421 bits (1081), Expect = 6.520e-142
Identity = 215/321 (66.98%), Postives = 254/321 (79.13%), Query Frame = 3
Query:  126 RSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKN 1088
            R+F+ + R   KVTVVGAAGGIGQPMSLLLK + K+  LSLFD+VN+PGVAADI H        GY GAE+M  AL GSDIVVIPAGVPRKPGMTRDDLF TNA+IV GIAE CA++CP A + IISNPVNSTVPIFA+ LK  GVYN  KL GVTTLD+ RAKTF+ +NQG+D   +KVDVIGGHAG TIMPLLSQV+G +FT++DI+ LTHRIQFGGDEVVKAKDGAGSATLSMA+AGA F   +L+ L+G + V+EC FVES LT+APFF+SP T+   GV E+H +G LS FEQ++ DEN+P L+K A KG  F  +
Sbjct:   10 RAFNSSARNLAKVTVVGAAGGIGQPMSLLLKTNPKVTELSLFDVVNTPGVAADIGHVCQPSVTKGYVGAEQMGEALQGSDIVVIPAGVPRKPGMTRDDLFATNANIVYGIAESCAQNCPDAMFAIISNPVNSTVPIFAEALKKYGVYNSKKLFGVTTLDITRAKTFIGQNQGLDPRDVKVDVIGGHAGKTIMPLLSQVQGVSFTDKDIEELTHRIQFGGDEVVKAKDGAGSATLSMAYAGASFTGSLLNALSGTE-VRECTFVESPLTDAPFFSSPVTIDANGVKEIHNFGTLSAFEQAVFDENLPTLVKQAEKGVAFAAS 329          
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Match: W7TN59_9STRA (Malate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN59_9STRA)

HSP 1 Score: 420 bits (1080), Expect = 8.920e-142
Identity = 218/331 (65.86%), Postives = 256/331 (77.34%), Query Frame = 3
Query:   96 ASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIGQPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMAAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACYLIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGMDVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFFASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKN 1088
            A+  A  C+VRS S T     +V VVGA+GGIGQP+S+LLKL   I  L+L+DIV++PGVAAD+SH     KV GYKGA+ + AAL+G D++V+PAGVPRKPGMTRDDLFN NA IVK IAE  AK  PKACYLIISNPVNSTVPIFA+VLK +G YNP KL GVTTLDV+RA TFVAENQG DV +  V V+GGHAGTTI+PLLSQVKGA+FT + + ALTHRIQFGGDEVVKAKDGAGSATLSMA+AG  F  K+L  L G K V  CAFVE+ LT APFFA+P TLG EGV +VH  G LS  EQ  +++ +P L+  A KG +FV+N
Sbjct:   11 AAMGAVACAVRSISSTKATAARVAVVGASGGIGQPLSMLLKLDPSIKELNLYDIVHTPGVAADLSHIPFPAKVTGYKGADSIHAALEGCDVIVVPAGVPRKPGMTRDDLFNINAGIVKTIAEASAKVAPKACYLIISNPVNSTVPIFAEVLKKAGTYNPKKLFGVTTLDVIRANTFVAENQGTDVLQTNVTVVGGHAGTTILPLLSQVKGASFTPDALAALTHRIQFGGDEVVKAKDGAGSATLSMAYAGYLFTAKLLQALKGEKDVVACAFVENTLTAAPFFAAPVTLGKEGVEKVHALGSLSAMEQEALEKALPDLLAQAKKGVEFVQN 341          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7701.18962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A097IUQ0_9PHAE9.880e-21888.83Malate dehydrogenase n=8 Tax=Sargassum TaxID=3015 ... [more]
D8LQM3_ECTSI3.370e-20484.53Malate dehydrogenase n=7 Tax=Eukaryota TaxID=2759 ... [more]
A0A097IUN2_SACJA4.530e-20284.81Malate dehydrogenase n=3 Tax=Laminariales TaxID=28... [more]
A0A097IUP2_9PHAE2.960e-19882.13Malate dehydrogenase n=1 Tax=Dictyopteris undulata... [more]
A0A097IUM6_9PHAE1.640e-19782.52Malate dehydrogenase n=1 Tax=Punctaria latifolia T... [more]
A0A097IUM5_9PHAE4.700e-19781.38Malate dehydrogenase n=1 Tax=Desmarestia viridis T... [more]
A0A097IUI7_9PHAE3.930e-18777.87Malate dehydrogenase n=1 Tax=Ishige okamurae TaxID... [more]
A0A835YGB7_9STRA3.170e-15870.15Malate dehydrogenase n=1 Tax=Tribonema minus TaxID... [more]
A0A6V1QQG6_HETAK6.520e-14266.98Malate dehydrogenase n=2 Tax=Heterosigma akashiwo ... [more]
W7TN59_9STRA8.920e-14265.86Malate dehydrogenase n=2 Tax=Monodopsidaceae TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7701contigF-serratus_M_contig7701:8277..14338 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score580.9
Seed ortholog evalue4.1e-163
Seed eggNOG ortholog2880.D8LQM3
Preferred nameMDH2
KEGG rclassRC00031
KEGG koko:K00026,ko:K03283
KEGG TC1.A.33.1
KEGG ReactionR00342,R07136
KEGG Pathwayko00020,ko00270,ko00620,ko00630,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko03040,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko05134,ko05145,ko05162,ko05164,ko05169,map00020,map00270,map00620,map00630,map00710,map01100,map01110,map01120,map01130,map01200,map03040,map04010,map04141,map04144,map04213,map04612,map04915,map05134,map05145,map05162,map05164,map05169
KEGG ModuleM00009,M00011,M00012,M00168,M00171,M00353,M00355
Hectar predicted targeting categorymitochondrion
GOsGO:0002165,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006091,GO:0006094,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006919,GO:0007275,GO:0007431,GO:0007435,GO:0007552,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009060,GO:0009117,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009893,GO:0009987,GO:0010604,GO:0010623,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0015980,GO:0016020,GO:0016051,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019222,GO:0019318,GO:0019319,GO:0019362,GO:0019538,GO:0019637,GO:0019674,GO:0019752,GO:0022612,GO:0030060,GO:0030154,GO:0030162,GO:0031323,GO:0031325,GO:0031974,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0034641,GO:0035069,GO:0035070,GO:0035071,GO:0035096,GO:0035209,GO:0035272,GO:0036211,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043280,GO:0043281,GO:0043412,GO:0043436,GO:0043543,GO:0043621,GO:0043648,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0045862,GO:0046364,GO:0046483,GO:0046496,GO:0046554,GO:0046983,GO:0048102,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048707,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0051087,GO:0051171,GO:0051173,GO:0051186,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060033,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0072350,GO:0072524,GO:0080090,GO:1901360,GO:1901564,GO:1901576,GO:2000116,GO:2001056
EggNOG free text desc.L-malate dehydrogenase activity
EggNOG OGsCOG0039@1,KOG1494@2759
EC1.1.1.37
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03009,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Exons10
Model size1527
Cds size1050
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7701.18962.1prot_F-serratus_M_contig7701.18962.1Fucus serratus malepolypeptideF-serratus_M_contig7701 9743..14294 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932304.5611942-UTR-F-serratus_M_contig7701:8276..83701622932304.5611942-UTR-F-serratus_M_contig7701:8276..8370Fucus serratus maleUTRF-serratus_M_contig7701 8277..8370 -
1690964243.9238102-UTR-F-serratus_M_contig7701:8276..83701690964243.9238102-UTR-F-serratus_M_contig7701:8276..8370Fucus serratus maleUTRF-serratus_M_contig7701 8277..8370 -
1622932304.5829298-UTR-F-serratus_M_contig7701:9403..97421622932304.5829298-UTR-F-serratus_M_contig7701:9403..9742Fucus serratus maleUTRF-serratus_M_contig7701 9404..9742 -
1690964243.9385972-UTR-F-serratus_M_contig7701:9403..97421690964243.9385972-UTR-F-serratus_M_contig7701:9403..9742Fucus serratus maleUTRF-serratus_M_contig7701 9404..9742 -
1622932304.7788093-UTR-F-serratus_M_contig7701:14294..143381622932304.7788093-UTR-F-serratus_M_contig7701:14294..14338Fucus serratus maleUTRF-serratus_M_contig7701 14295..14338 -
1690964244.0486362-UTR-F-serratus_M_contig7701:14294..143381690964244.0486362-UTR-F-serratus_M_contig7701:14294..14338Fucus serratus maleUTRF-serratus_M_contig7701 14295..14338 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932304.601387-CDS-F-serratus_M_contig7701:9742..98831622932304.601387-CDS-F-serratus_M_contig7701:9742..9883Fucus serratus maleCDSF-serratus_M_contig7701 9743..9883 -
1690964243.9514506-CDS-F-serratus_M_contig7701:9742..98831690964243.9514506-CDS-F-serratus_M_contig7701:9742..9883Fucus serratus maleCDSF-serratus_M_contig7701 9743..9883 -
1622932304.6188853-CDS-F-serratus_M_contig7701:10593..107131622932304.6188853-CDS-F-serratus_M_contig7701:10593..10713Fucus serratus maleCDSF-serratus_M_contig7701 10594..10713 -
1690964243.970048-CDS-F-serratus_M_contig7701:10593..107131690964243.970048-CDS-F-serratus_M_contig7701:10593..10713Fucus serratus maleCDSF-serratus_M_contig7701 10594..10713 -
1622932304.635221-CDS-F-serratus_M_contig7701:10996..111131622932304.635221-CDS-F-serratus_M_contig7701:10996..11113Fucus serratus maleCDSF-serratus_M_contig7701 10997..11113 -
1690964243.9813473-CDS-F-serratus_M_contig7701:10996..111131690964243.9813473-CDS-F-serratus_M_contig7701:10996..11113Fucus serratus maleCDSF-serratus_M_contig7701 10997..11113 -
1622932304.6515677-CDS-F-serratus_M_contig7701:11262..113391622932304.6515677-CDS-F-serratus_M_contig7701:11262..11339Fucus serratus maleCDSF-serratus_M_contig7701 11263..11339 -
1690964243.989967-CDS-F-serratus_M_contig7701:11262..113391690964243.989967-CDS-F-serratus_M_contig7701:11262..11339Fucus serratus maleCDSF-serratus_M_contig7701 11263..11339 -
1622932304.6713583-CDS-F-serratus_M_contig7701:11616..117041622932304.6713583-CDS-F-serratus_M_contig7701:11616..11704Fucus serratus maleCDSF-serratus_M_contig7701 11617..11704 -
1690964244.0035212-CDS-F-serratus_M_contig7701:11616..117041690964244.0035212-CDS-F-serratus_M_contig7701:11616..11704Fucus serratus maleCDSF-serratus_M_contig7701 11617..11704 -
1622932304.6878755-CDS-F-serratus_M_contig7701:12091..122301622932304.6878755-CDS-F-serratus_M_contig7701:12091..12230Fucus serratus maleCDSF-serratus_M_contig7701 12092..12230 -
1690964244.0120537-CDS-F-serratus_M_contig7701:12091..122301690964244.0120537-CDS-F-serratus_M_contig7701:12091..12230Fucus serratus maleCDSF-serratus_M_contig7701 12092..12230 -
1622932304.7146368-CDS-F-serratus_M_contig7701:12453..125541622932304.7146368-CDS-F-serratus_M_contig7701:12453..12554Fucus serratus maleCDSF-serratus_M_contig7701 12454..12554 -
1690964244.0207784-CDS-F-serratus_M_contig7701:12453..125541690964244.0207784-CDS-F-serratus_M_contig7701:12453..12554Fucus serratus maleCDSF-serratus_M_contig7701 12454..12554 -
1622932304.735484-CDS-F-serratus_M_contig7701:13754..139041622932304.735484-CDS-F-serratus_M_contig7701:13754..13904Fucus serratus maleCDSF-serratus_M_contig7701 13755..13904 -
1690964244.0291758-CDS-F-serratus_M_contig7701:13754..139041690964244.0291758-CDS-F-serratus_M_contig7701:13754..13904Fucus serratus maleCDSF-serratus_M_contig7701 13755..13904 -
1622932304.7634814-CDS-F-serratus_M_contig7701:14177..142941622932304.7634814-CDS-F-serratus_M_contig7701:14177..14294Fucus serratus maleCDSF-serratus_M_contig7701 14178..14294 -
1690964244.0385945-CDS-F-serratus_M_contig7701:14177..142941690964244.0385945-CDS-F-serratus_M_contig7701:14177..14294Fucus serratus maleCDSF-serratus_M_contig7701 14178..14294 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7701.18962.1

>prot_F-serratus_M_contig7701.18962.1 ID=prot_F-serratus_M_contig7701.18962.1|Name=mRNA_F-serratus_M_contig7701.18962.1|organism=Fucus serratus male|type=polypeptide|length=350bp
MSVVARSRSVAKLAAPMASKAAAVCSVRSFSGTGRRQNKVTVVGAAGGIG
QPMSLLLKLSGKIDHLSLFDIVNSPGVAADISHCNTKGKVVGYKGAEEMA
AALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACY
LIISNPVNSTVPIFADVLKASGVYNPAKLMGVTTLDVVRAKTFVAENQGM
DVDKIKVDVIGGHAGTTIMPLLSQVKGANFTEEDIKALTHRIQFGGDEVV
KAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGVKECAFVESALTEAPFF
ASPCTLGTEGVSEVHTYGQLSPFEQSLVDENVPALIKMATKGSDFVKNN*
back to top

mRNA from alignment at F-serratus_M_contig7701:8277..14338-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7701.18962.1 ID=mRNA_F-serratus_M_contig7701.18962.1|Name=mRNA_F-serratus_M_contig7701.18962.1|organism=Fucus serratus male|type=mRNA|length=6062bp|location=Sequence derived from alignment at F-serratus_M_contig7701:8277..14338- (Fucus serratus male)
CCAAAATCCTCTCCTCGCCCGCGAATCCCCTTAACCACTGTATCATGTCG GTCGTCGCACGTTCCCGCTCAGTGGCAAAGTTGGCAGCACCGATGGCATC GAAGGCTGCAGCTGTTTGTTCGGTTCGATCATTCAGCGGCACGGGCCGTC GCCAAAACAAGGTGCGCATTTTTTTCGCGGTCGCCGTTCCTATTTGCTTG TTGGCATGAGCATGACGCATATGAGTCAAAGAAGGGTCCGGCTCGCTGGG CCTGCTTGATGAGTATGACTGGTACATGCCTAATCGCTATTTATAGTCAG TGCAGTGCTGGATTTCCTCGAGAAAGCAAGCGATCTACCGGCTGTTTCGC GGTGCAGCTACCCAAGCTTTTCGGGAACTTCCATAAACGTCCTCAACGTC TACTGGTATTGTACCCTGGTATGAATCGGAGCAGGTAACCGTCGTTGGAG CCGCGGGTGGCATCGGACAGCCCATGTCTCTCCTGTTGAAGCTGTCGGGG AAGATCGACCATCTCTCGCTGTTCGACATTGTCAACAGCCCCGGCGTCGC CGCGGATATCTCCCACTGCAACACCAAGGGAAAGGTTTGTCGTCTCCGCC TCCGAAGGCTTGCTTTGCTGTTCTGAAACATGTCCACCAGCTCATTTTTT GCTTTTGCTCTTGTAAGTACAGTATCCGAGATGCTTCGGTTGTGCGTCCC GAGTCGGGGGATATTGCAGCAGATTAGAACGCCCAGAGGTCACTTCAAAC ATCTAGGGAATATCAGCGTTTCAAAATGATTCTGATATTATGGATATATG CATAGTCTGAACTACTAAATAATAGAGGAAACCTCGCATAGGCCTGTGAT ATAGGGCTGCGTTCATTCGGTAATGCCCGTTCCTTTTCCTTCTACATGCA GTATTTTTCAGTATTTTTAGTATGCGGTAGTACAAGTAATGTACTCTCGA GTACTAAGTATTATTTTTAGAACATACCAGGTAGCACACATCTCTGTAAG ACCGTACTCCTGGTTCAAAGAGCGAAGTCCAGAGGGCCTAAACTGTACCA GATGCGTTCAGATTTTCTTTAAACTCTAGTACAGTAGTTGTAGATGTAGC AGATCGGGTGGGTACCTCGTACTCGCACTTTGAAAAAAAAAAGCGAAGCT TTCGGCCGGTGGGTTTCAGCGCTACGCTGAACTCTTCTCGATAGCATGGA CCCAGTGACTGCGGAAGGCGAGGCTCGGAGGGACTAATGATGTTGGTTTT ATTCAACCCGCATAGCTAAACCCGCAGCTATTATTCTGTCTACGCGGAAA TTCTCGCCGAGCTTTACTCTGCTGACCGTCGAGCTCAAATCACTGTCAAA TTCTCACCATATGCCTTTCAAGGGCCGAATTTTACAAAAAACGGAGCGCG CTCGTCATACCCATATACCTTCTTCCGAATGGTTGGAGACTGGTACAGTA CATGCCGAATACGATCCGGCCTGACTTTGTGATACCCTATACGGTACTGA ACTGAATTGGACTTTACTGTACTGTACTACTGTACGAATAAAGAGCTAGC TCCACGGCTCGGTATGTTCAAGAAGTTGTCGCGAGCCGCAACCTACGTAC CCTATAGCTCTAGCTCTAAGGTATCTCCAGGCAATTTTGGGACAAGCAAT GTCATTGTGGTCAAGAGTACCTGCGCCACCTCCCCATTCTGCCCCGCATA TTGCACTATTTTGTCGTCACTTATCAATAGTAAGGATTATGCAGCGTCGT TTATCCCCCATGGTACCGTCCCTCGTGCCGGCAGGTTGTGGGCTACAAGG GCGCTGAGGAAATGGCGGCAGCGTTGGACGGCAGCGATATCGTCGTGATC CCCGCCGGTGTGCCCCGTAAGCCAGGCATGACCCGGTGAGCCTAAGGGAG CGATGGGCGGACGGTTGGGCGTGTTGCATGTTTTCAAAGGCAGACATGCG GTATACTATTGCTCTTTTTCAACAGCAGTCGGTTTCGGTTCAATCTATCC CTCCCCCAGTCTGGTCTCGCGTCTTGTGTGCGCCACCACCAAAATTTCCA TGCTGGCGGCTCCATGCACGATATATGATAACGAAACCGCACCACCGCGA CTGCTCAGGGACGATCTGTTCAACACGAACGCCTCCATCGTTAAGGGCAT CGCGGAGCAGTGCGCCAAAAGCTGCCCCAAGGCTTGCTACCTCATCATCT CGAACCCCGTCAACTCCACGGTGCCCATATTCGCCGACGTCCTCAAGGTG CCAGAATTGTCCTGTGGACCATCACGATGCCACACCAGTAATCGAATATG AAAAGCTACTTCCTTCTGTACCAGTCGTAATCTCTCTCGATGTGGTTCGA GATCTGCTGTGTGCTTGCGACGTGATGCCTGCTTCGATGCCAAGTCTCTC AGCTCACGGATTTGTATACTTTTGCTGGTGCATGAAAGCCCTAATTGTTT TCCCAACTTTCCTCTCGACTGCGGGGAGTCTGTAGCTGGTACGTAGCTTG GTCCGCCTGCGTCGTATACAAGTGTTCCTTTTTATTTGTTTGCTACCGCA CTATCTATACTTCTATACTTTGTGTCTCCAATATATATGTCGATATTACA TTACTTCGCGTGCACCGTGCGGCGTGCGCGTCAGGCGAGCGGTGTCTACA ACCCGGCAAAGCTCATGGGAGTTACCACCCTCGACGTGGTCCGCGCCAAG ACTTTCGTTGCAGAAAACCAGGGTGGGTGGGCCAGTGCAGATCCTCGTTT GGCGAATCGTGAGCTCTGGCTGCACAAACCCCTGTTCAGTCTTTTGGGGC TGTGGAGAAGCCACGAAATCTTTTGAAGCCGTTGCGGGTTACCGTTCTAC GTTAACGCGAAGCGGAAGGCGTCCGCTATGATGATGCTGATTACCGTTTG AGTTATTTGCCAAAAGCACTCCGCGTGCCTTGCACACCTCTACAAAGCTC CGCCTCCTCTTGGTGATGGAACACCCCATCGGTGATGCAAAATGGACAGG CATGGACGTGGACAAGATCAAGGTTGACGTCATCGGGGGCCACGCGGGAA CGACCATCATGCCCCTCCTGTCACAGGTACCGTCCCGTTTCCGGAGCGCC GGCGCCCTTGCAATGTCGCTTGTAGAGGCCTCGCCATCCCTCAGCGCGCG CCCAGGCGTCACCGTCGCCCGAGGCCGTAACCCCCCCCCCCCCGTGCGCT CGATCCGGCCGAACGGCGTGCTCAGGTGAAGGGGGCCAACTTCACCGAGG AAGACATCAAAGCGCTCACTCATAGGATCCAGTTCGGGGGCGACGAGGTC GTGAAGGCGAAGGACGGGGCCGGATCTGCGACGCTTTCCATGGTGAGCAA AACCGCAGACCGCATGGGAATGTAAAATACATGAAGGAGGCAGAAAGAGA GGTATCTTCCACATGGCGAAGGGAACCTTGTGTACCCTCGTTTTTAGCGA GGTTAGGAACGATGGCTTGCGGGACTTTCCCCACTCCTTCTTTGTTTTTG CTTGACATGTTCATAAGAGGCGACCCGCCTCTGTGGCAGACGTTGATATT CGACCGCTCGAACGCGCGGAAAATTGATCGCTAAAAGTGGCGCGCGGATC TGACCCTGCGTCTCTGATGGTCCAGGCGCACGCGGGGGCGTACTTCGCGG AGAAGGTACTCGACGGGCTTAACGGGGTGAAGGGCGTCAAGGAGTGCGCG TTCGTGGAGAGCGCCCTCACGGAAGCACCGTTCTTCGCCTCGCCGGTGAG AGATGAAACTTCGAGCGGTTTTGTAGCGCTAGGCGTGTCTGGTCTGGTCT GGTGTCGTCCGTGTGGTGGAGCAAGGTGTTGGACAGGATCGTTGCTATCA AATAGCGATGGTAGAGAGTTTTTGATTGTCTATAAATACAATGATATACT TCGTTGGAGTATAGGTCCACTGGAGCCTACAAAGGCACATGACGTGTATC GTGATCCGCGCATGGAACAGAAAACCTCTTCAACGCCCTTCAAAACACTT CACTACGCCTCTGTCGCTAGGTTTTGCAGTCAGTATGACTTTTTGCTCTA TGAGTACTGTATCAAGTGTGTTCCAAGTATCTTAACACAAAATAAATCTG AAGCTGACGTAACATTCTACACTGTTGCATACCAGTATATATTACTGTTC TACGAAGTAAAATACTACACGGGCGTGCTACGGTCCGTGGTTTAGAACTA GAATACTAGGGTGTACAAGGAGCAGCTGTATCTAGTGATGCGACGGAAGT GTAAACCCTACCACACAAGCTGCTCTCCATAACCTAATTGCAAAAAAGCA AGGTACCCCTGTAAAATTTGAGGAGGCGTTTCTATTTCCTAAGCGTCGTG TCCTAAAGCCTGGTATATCTTGCTTTTTTTTTCGTGCCCGAGGTCATGAT TCGCGCTTTGTCACGTGCTTCCAACCCCCGCCGCCTTGAAATCCTTCGTA TGCAGTGCACATTGGGCACCGAGGGCGTTAGCGAAGTCCACACGTACGGT CAGCTCTCTCCTTTCGAGCAGTCCTTGGTAGACGAGAACGTGCCCGCACT CATCAAAATGGCAACCAAGGGCTCCGACTTCGTCAAAAACAACTAACTGC TGCTATATCCATATTGTAGTGCTTTTGCAAGCGCGTTTTTTTAATGGTGA ACCGCGCGATGCTTAGTGCTAGAGTACACGACACCTGTTTGGTCATGCTG ACTTATTTTTTCGGGGGGGGGAACTCGGTCGCTGAGATGATGTTACAATA CTGCGGAGGCCAGAGGGGTCAGCAAGACAAGTCGACGTGGGTGTTGTTCC ATGGGTTATAATGGATGCGCCGGCCTACTACGTACCGGGTACACGTTTAC TGTTTGACAGTACATTTGTCCTGCCTTCACCTGAAGCGAGAAGGATTGAT TGAATAATGGAATAATCGAATTGAATTCTCCAAGGGTAGGTTCTGTAGGG TAAGGGTACGTTCGGTAGGGTACTGGGTCTGTCACAGAACTCACAGAAAA GTTCGGTAGGGTACTGGATCTGTCACAGAATTCACAGAACCATAGGGTAT TGTGGTGCGCCGTCACAGAACTCACAGAACTTTCGAGTTCTGTAAGCGAG CTGTCACAGAAAAGTTCGGTAGGGTACTGGGTCTGTCACAGAACTCACAG AAAAGTTCGGTAGGGTGCTGGGTCTGTCACAGAACTCACAGAACTATAGG GTACTGTGGCGCGACCTTCACAGAACTCACAGAACTCGTCTGTGGGGTAG TTACCGAGGGTACCTACCCCCGGTGTGGATCTGTGGGTACCCTACAGAAC CTACCCTTGGAATTTTGTGTCGACTTCACCTGCCTCCGCCGCGTGCGAGC TCGCCTCAGTCTCGCCCGCGGCTTCTGGCGTAGATGAACTGCTGGAGTCC GCAGCGCTCATGTTACCTCTCAAACCGATACCGTGCGTTGTTTGTGGGAT GTGTGGCATGTGTGACAGATCTGCAGGGTCCGCCGGTCTGTGTGTGAGTT CGTGAGGGTAGAGGGTACGCTTCAAGTTTGGTTCGTAGAGGTGACGTCAG CCCACCGGGGTAATCACACTTGTGGAGGGTAGTTCCACATATGTTTACCC GTACCGCGGGTATTGTTGACCCGGGTGTACAGAACCAGAGGGTACGTTCG GTAGGGTACTGGATCTGTCACAGAACTCACAGAACTATAGGGTATTGTGG TGCGCCGTCACAGAACTCACAGAACTTTCGAGTTCTGTAAGCGAGCTGTC ACAGAAAGTTCGGTAGGGTACTGGGTCCGTCACAGAACTCACAGAAAAGT TCGGTAGGGTGCTGGGTCTGTCACAGAACTCACAGAACTATAGGGTACTG TGGCGCGACCTTCACAGAACTCACAGAACTCGTCTGTGGGGTAGTTACCG AGGGTACCTACCCCCGGTGTGGATCTGTGGGTACCCTACAGAACCTACCC TTGGAATTCTCACATGAGCTGATGTAAACAATTCAGCCCGTGGTAACAAG GTGGAGAAAACACATTGAGAAGGGGAAAAAAACGTACGTACTCCGATTGA ATTGAATTCTCA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig7701:8277..14338-

>mRNA_F-serratus_M_contig7701.18962.1 ID=mRNA_F-serratus_M_contig7701.18962.1|Name=mRNA_F-serratus_M_contig7701.18962.1|organism=Fucus serratus male|type=CDS|length=2100bp|location=Sequence derived from alignment at F-serratus_M_contig7701:8277..14338- (Fucus serratus male)
ATGTCGGTCGTCGCACGTTCCCGCTCAGTGGCAAAGTTGGCAGCACCGAT
GGCATCGAAGGCTGCAGCTGTTTGTTCGGTTCGATCATTCAGCGGCACGG
GCCGTCGCCAAAACAAGATGTCGGTCGTCGCACGTTCCCGCTCAGTGGCA
AAGTTGGCAGCACCGATGGCATCGAAGGCTGCAGCTGTTTGTTCGGTTCG
ATCATTCAGCGGCACGGGCCGTCGCCAAAACAAGGTAACCGTCGTTGGAG
CCGCGGGTGGCATCGGACAGCCCATGTCTCTCCTGTTGAAGCTGTCGGGG
AAGATCGACCATCTCTCGCTGTTCGACATTGTCAACAGCCCCGGCGTCGC
CGCGGATATCTCCCACTGCAACACCAAGGGAAAGGTAACCGTCGTTGGAG
CCGCGGGTGGCATCGGACAGCCCATGTCTCTCCTGTTGAAGCTGTCGGGG
AAGATCGACCATCTCTCGCTGTTCGACATTGTCAACAGCCCCGGCGTCGC
CGCGGATATCTCCCACTGCAACACCAAGGGAAAGGTTGTGGGCTACAAGG
GCGCTGAGGAAATGGCGGCAGCGTTGGACGGCAGCGATATCGTCGTGATC
CCCGCCGGTGTGCCCCGTAAGCCAGGCATGACCCGGTTGTGGGCTACAAG
GGCGCTGAGGAAATGGCGGCAGCGTTGGACGGCAGCGATATCGTCGTGAT
CCCCGCCGGTGTGCCCCGTAAGCCAGGCATGACCCGGGACGATCTGTTCA
ACACGAACGCCTCCATCGTTAAGGGCATCGCGGAGCAGTGCGCCAAAAGC
TGCCCCAAGGCTTGCTACCTCATCATCTCGAACCCCGTCAACTCCACGGT
GCCCATATTCGCCGACGTCCTCAAGGGACGATCTGTTCAACACGAACGCC
TCCATCGTTAAGGGCATCGCGGAGCAGTGCGCCAAAAGCTGCCCCAAGGC
TTGCTACCTCATCATCTCGAACCCCGTCAACTCCACGGTGCCCATATTCG
CCGACGTCCTCAAGGCGAGCGGTGTCTACAACCCGGCAAAGCTCATGGGA
GTTACCACCCTCGACGTGGTCCGCGCCAAGACTTTCGTTGCAGAAAACCA
GGGCGAGCGGTGTCTACAACCCGGCAAAGCTCATGGGAGTTACCACCCTC
GACGTGGTCCGCGCCAAGACTTTCGTTGCAGAAAACCAGGGCATGGACGT
GGACAAGATCAAGGTTGACGTCATCGGGGGCCACGCGGGAACGACCATCA
TGCCCCTCCTGTCACAGGCATGGACGTGGACAAGATCAAGGTTGACGTCA
TCGGGGGCCACGCGGGAACGACCATCATGCCCCTCCTGTCACAGGTGAAG
GGGGCCAACTTCACCGAGGAAGACATCAAAGCGCTCACTCATAGGATCCA
GTTCGGGGGCGACGAGGTCGTGAAGGCGAAGGACGGGGCCGGATCTGCGA
CGCTTTCCATGGTGAAGGGGGCCAACTTCACCGAGGAAGACATCAAAGCG
CTCACTCATAGGATCCAGTTCGGGGGCGACGAGGTCGTGAAGGCGAAGGA
CGGGGCCGGATCTGCGACGCTTTCCATGGCGCACGCGGGGGCGTACTTCG
CGGAGAAGGTACTCGACGGGCTTAACGGGGTGAAGGGCGTCAAGGAGTGC
GCGTTCGTGGAGAGCGCCCTCACGGAAGCACCGTTCTTCGCCTCGCCGGC
GCACGCGGGGGCGTACTTCGCGGAGAAGGTACTCGACGGGCTTAACGGGG
TGAAGGGCGTCAAGGAGTGCGCGTTCGTGGAGAGCGCCCTCACGGAAGCA
CCGTTCTTCGCCTCGCCGTGCACATTGGGCACCGAGGGCGTTAGCGAAGT
CCACACGTACGGTCAGCTCTCTCCTTTCGAGCAGTCCTTGGTAGACGAGA
ACGTGCCCGCACTCATCAAAATGGCAACCAAGGGCTCCGACTTCGTCAAA
AACAACTAATGCACATTGGGCACCGAGGGCGTTAGCGAAGTCCACACGTA
CGGTCAGCTCTCTCCTTTCGAGCAGTCCTTGGTAGACGAGAACGTGCCCG
CACTCATCAAAATGGCAACCAAGGGCTCCGACTTCGTCAAAAACAACTAA
back to top