prot_F-serratus_M_contig77.18956.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig77.18956.1
Unique Nameprot_F-serratus_M_contig77.18956.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length200
Homology
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 3.800e-27
Identity = 67/157 (42.68%), Postives = 95/157 (60.51%), Query Frame = 0
Query:    1 MVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTS-ILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSIN-----GDHPFPVDVHLAWYILAILRFVVGFLGWIAITDDGGNAKKPD 151
            + AVP +T RLG+ +SQRL SI  V    + P++  L  T  +L + +V LLFT Y++ ++FY  IS AINN+ +  R GEVNGLA  + S+  A GPA  SAL+AFS+         PFP+D  LA++++A LR VV  L W  I  D  + ++ D
Sbjct:  303 LFAVPLVTKRLGVTISQRLSSITLVFVLPLVPVLGRLPNTGHLLMIASVGLLFTVYSTCDAFYTCISFAINNAAEPERCGEVNGLAACVASVVSAVGPAAWSALYAFSVEFADGRSPFPFPIDFRLAFWLMAFLRLVVAILSWSTIKGDKAHERRVD 459          
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: A0A6H5KYW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW2_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.400e-24
Identity = 57/139 (41.01%), Postives = 89/139 (64.03%), Query Frame = 0
Query:    1 MVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTS-ILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSINGDH-PFPVDVHLAWYILAILRFVVGFLGW 137
            ++  P ++ R+G   SQR      +P ++VFP + +LR T   L   ++ LLF T A +N+ ++ ++LA NN+    RRG + GL+MT GS++KAAGP   S++FA+SI+G   PFP+D HLA+Y+LA+   VV +  W
Sbjct:    6 LLLYPRLSKRIGATRSQRWACFLSIPVFIVFPTLSHLRDTERTLVAASLVLLFLTNAVANTVFINVALATNNAVGPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVVVSWASW 144          
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 9.200e-24
Identity = 57/139 (41.01%), Postives = 91/139 (65.47%), Query Frame = 0
Query:    1 MVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTS-ILDVVTVTLLFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVCSALFAFSINGDH-PFPVDVHLAWYILAILRFVVGFLGW 137
            ++  P ++ R+G   SQR      +P ++VFP + +LRGT   L   ++ LLF T A +N+ ++ ++LA NN+ +  RRG + GL+MT GS++KAAGP   S++FA+SI+G   PFP+D HLA+Y+LA+   +V +  W
Sbjct:  481 LLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVEPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGRRRPFPLDYHLAFYLLALGMVLVSWASW 619          
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Match: A0A8K0F3I2_BRALA (Hypp5140 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0F3I2_BRALA)

HSP 1 Score: 55.1 bits (131), Expect = 2.090e-5
Identity = 24/58 (41.38%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   78 RGEVNGLAMTIGSISKAAGPAVCSALFAFSINGDHPFPVDVHLAWYILAILRFVVGFL 135
            RG VNG+A T+  +++  GPA+ + LFA++ +   P+P+D HLA+Y+L +L  ++ FL
Sbjct:  493 RGTVNGIAQTLAGLARLVGPAMSANLFAWTTDNGMPWPLDHHLAFYLLIVLCLLMVFL 550          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig77.18956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JZQ3_9PHAE3.800e-2742.68MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KYW2_9PHAE1.400e-2441.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRH9_ECTSI9.200e-2441.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K0F3I2_BRALA2.090e-541.38Hypp5140 protein n=1 Tax=Branchiostoma lanceolatum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 2..149
e-value: 1.8E-5
score: 26.2
NoneNo IPR availablePANTHERPTHR23504:SF15PROTEIN ZINC INDUCED FACILITATOR-LIKE 1coord: 2..135
NoneNo IPR availablePANTHERPTHR23504FAMILY NOT NAMEDcoord: 2..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 141..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 19..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..69
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 6..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig77contigF-serratus_M_contig77:696572..697642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig77.18956.1mRNA_F-serratus_M_contig77.18956.1Fucus serratus malemRNAF-serratus_M_contig77 696101..698122 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig77.18956.1 ID=prot_F-serratus_M_contig77.18956.1|Name=mRNA_F-serratus_M_contig77.18956.1|organism=Fucus serratus male|type=polypeptide|length=200bp
MVAVPCITSRLGIKLSQRLGSIAEVPTYMVFPMIIYLRGTSILDVVTVTL
LFTTYASSNSFYLAISLAINNSTDAPRRGEVNGLAMTIGSISKAAGPAVC
SALFAFSINGDHPFPVDVHLAWYILAILRFVVGFLGWIAITDDGGNAKKP
DGSLDGFELEGIDVDVVDYHENSSNGTVATRTGFKLDKRVNKAEEEKGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf