mRNA_F-serratus_M_contig77.18955.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: A0A6H5KX39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX39_9PHAE) HSP 1 Score: 103 bits (257), Expect = 4.740e-21 Identity = 80/172 (46.51%), Postives = 103/172 (59.88%), Query Frame = 1
Query: 1 GSWAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGTSNPPRGPAXXXXXXXXXXXXXXXXXS-----SGRGRSSIVPPLGDRLALELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERLSAARVFVDIDEYLSD 501
G WA+NQG ARCGPGA+AT F +A A D A + + AGGR+SGRV P + G XXXXXXXXXXXXX +G G S VPPLG+ L +G+ +I LA+ GIT+E+AD FLNTGF D E+AV MT ++++RLS R + +Y+ D
Sbjct: 69 GMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGWARPASEXXXXXXXXXXXXXXXXTGGLDDDLSPAGSGPSRKVPPLGE-LVKHMGSLSIPTLAQSAGITTEEADFFLNTGFTADEVQPERAVATMTVLLDKRLSLQRDGDSVQDYMDD 239
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: A0A6H5K0A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A1_9PHAE) HSP 1 Score: 101 bits (251), Expect = 3.780e-20 Identity = 78/172 (45.35%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 1 GSWAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGTSNPPRGPAXXXXXXXXXXXXXXXXXS-----SGRGRSSIVPPLGDRLALELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERLSAARVFVDIDEYLSD 501
G WA+NQG ARCGPGA+AT F +A A D A + + AGGR+SGRV P + GG XXXXXXXXXXXXXXX +G G S VPPLG+ L +G+ +I LA+ G+++E+AD FLNTGF D E+A+ +MT ++++R S R + +++ D
Sbjct: 209 GMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEASTVXXXXXXXXXXXXXXXLDDDISPAGSGPSRKVPPLGE-LVKHMGSLSIPTLAQSAGVSTEEADYFLNTGFMADEVQPERAMAMMTVLLDKRHSLQRGGDSVQDFMDD 379
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: A0A6H5KF37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF37_9PHAE) HSP 1 Score: 101 bits (251), Expect = 5.520e-20 Identity = 81/170 (47.65%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 1 GSWAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGTSNPPRGPAXXXXXXXXXXXXXXXXXS-----SGRGRSSIVPPLGDRLALELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERLSAARVFVDIDEYL 495
G WA+NQG ARCGPGA+AT F +A A + A + + AGGR+SGRV P + GG XXXXXXXXXXXXXXXX +G G S VPPLG+ L +G+ +I LA+ G+T+E+AD FLNTGF +V P E+AV + T ++++RLS R + +Y+
Sbjct: 219 GMWAINQGNARCGPGAKATSFEEAVAANNIALGSRSGAAAGGRASGRVSPASSIGGVRPASEAXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLGE-LVKHMGSLSIPTLAQSAGVTTEEADYFLNTGFTVEVQP-ERAVAMTTVLLDKRLSLQRDGDSVQDYM 386
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: A0A6H5KRQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ2_9PHAE) HSP 1 Score: 101 bits (252), Expect = 6.150e-20 Identity = 83/172 (48.26%), Postives = 105/172 (61.05%), Query Frame = 1
Query: 1 GSWAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGTSNPPRGPAXXXXXXXXXXXXXXXXXS-----SGRGRSSIVPPLGDRLALELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERLSAARVFVDIDEYLSD 501
G WA+NQG ARCGPGA+AT F +A A D A + + GGR+SGRV P + GG AXXXXXXXXXXXXXXXX +G G S VPPLGD L +G+ TI LA+ G+T+E+AD FLNTGF D E+AV MT ++++R S R + + + D
Sbjct: 89 GMWAINQGKARCGPGAKATSFQEAVAADNIALGSRSGAVDGGRASGRVSPASSIGGARPASEASAXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLGD-LVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTADEVQPERAVAKMTVLLDKRRSLQRDGDSVQDSMDD 259
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: A0A6H5L4P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P2_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 5.660e-19 Identity = 80/170 (47.06%), Postives = 102/170 (60.00%), Query Frame = 1
Query: 1 GSWAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGTSNPPRGPAXXXXXXXXXXXXXXXXXS-----SGRGRSSIVPPLGDRLALELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERLSAARVFVDIDEYL 495
G WA+NQG ARCGP A+ T F +A A D A + + AGGR+SGRV P + GG XXXXXXXXXXXXXXXX +G G S VPPLGD L +G+ TI LA+ G+T+E+AD FLNTGF D E+AV +M +++ RL R + +Y+
Sbjct: 39 GMWAINQGNARCGPSAKVTSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDFSPAGSGPSRKVPPLGD-LVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYM 207
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: A0A6H5KXD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD3_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.360e-18 Identity = 80/170 (47.06%), Postives = 102/170 (60.00%), Query Frame = 1
Query: 1 GSWAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGTSNPPRGPAXXXXXXXXXXXXXXXXXS-----SGRGRSSIVPPLGDRLALELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERLSAARVFVDIDEYL 495
G WA+NQG ARCGPGA+AT F +A A D A + + GGR+SG V P + GG AXXXXXXXXXXXXXXX +G G S VPPLGD L +G+ TI LA+ G+T+E+AD FLNTGF D E+AV +M +++ RL R + +Y+
Sbjct: 219 GMWAINQGNARCGPGAKATSFQEAVAADNIALGSRSGAVDGGRASGWVSPASSIGGARPASEASAXXXXXXXXXXXXXXXGLDDDFSPAGSGPSRKVPPLGD-LVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYM 387
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: D7FZ43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ43_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 1.720e-18 Identity = 77/175 (44.00%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 1 GSWAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGT---SNPPRGPAXXXXXXXXXXXXXXXXXSS--GRGRSSIVPPLGDRLALELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERLSAARVFVDIDEYLSDALD 510
G+WA+NQG ARCGPGA+AT +A A D A+ + + AGGR+SGRV P + GG S XXXXXXXXXXXXX SS G G S VPPLG L +G+ +I LA+ G+T+E+AD FL GF D E+ V +MT ++++R + R +++Y+ + D
Sbjct: 2 GTWAINQGNARCGPGAKATSVQEAVAADNIAWGSRSGAAAGGRASGRVSPVSSIGGARPASEXXXXXXXXXXXXXXXXXXXIDDDSSPAGSGSSRKVPPLGG-LVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDELGD 175
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: A0A6H5JQZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ1_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 7.680e-17 Identity = 76/179 (42.46%), Postives = 100/179 (55.87%), Query Frame = 1
Query: 7 WAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGTS-----NPPRGPAXXXXXXXXXXXXXXXXXSSGRGRSSIVPPLGDRLAL---------ELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERLSAARVFVDIDEYLSD 501
WA+N+G ARCGPGA+AT F +A A D A + + AGGR+SGRV P + GG + XXXXXXXXXXXX +G G S VPPLGD + L PT ++ A G+T+E AD FLNTGF D E+AV +M ++++RLS R + +Y+ D
Sbjct: 2 WAINKGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVNPASSIGGLRPASEVSXXXXXXXXXXXXXXXXXXDDDFSPAGSGPSRKVPPLGDLVXXXXXXXXXXXSLSIPTPAQSA---GVTTEDADYFLNTGFTADEVQPERAVAMMAVLLDKRLSPQRDGDSVQDYMDD 177
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: A0A6H5JB21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB21_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 1.020e-16 Identity = 87/203 (42.86%), Postives = 118/203 (58.13%), Query Frame = 1
Query: 1 GSWAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGTSNPPRGPAXXXXXXXXXXXXXXXXXS-----SGRGRSSIVPPLGDRLALELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERL------SAARV--FVDIDEYLSDALDGGQQGLGVCSCTHCSRTTPY 570
G WA+N ARCGPGA+AT F +A A D A + + AGGR+SGRV P + GG XXXXXXXXXXXXXXXX +G G S VPPLG+ + L +G+ +I LA+ G+T+E+AD FLNTGF D E+AV ++T +++ RL +A+R + ++ S G GL SC +CS +T +
Sbjct: 218 GMWAIN---ARCGPGAKATSFQEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDLSPAGSGPSRKVPPLGELVEL-MGSLSIPTLAQSAGVTTEEADYFLNTGFTADEVQPERAVAMVTVLLDNRLVSSATETASRTTWMILVNRICSCP---GLIGLTSRSCLNCSSSTAW 413
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Match: A0A6H5K8N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N2_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.250e-15 Identity = 80/187 (42.78%), Postives = 99/187 (52.94%), Query Frame = 1
Query: 1 GSWAVNQGIARCGPGARATLFSDARADDEFAFRATTMQGAGGRSSGRVGPTLNAGGTSNPPRGPAXXXXXXXXXXXXXXXXXSSG-----RGRSSIVPPLGDRLALELGAPTISELAKQTGITSEQADRFLNTGFKFDVFPLEKAVTIMTAVMNERLSAARVFVDIDEYLSDALDGGQQGLGVCSCT 546
G WA+NQG ARCGPGA+AT F +A A D A + + GGR+SGRV P + GG AXXXXXXXXXXXXXXXX G S P LG+ L +G+ +I LA+ G+T+E+AD FLNTGF D E+AV +M RL V + G G C C+
Sbjct: 39 GMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAVDGGRASGRVSPASSIGGARPASEASAXXXXXXXXXXXXXXXXLDDDLSPAESGPSRKFPTLGE-LVKHMGSLSIPTLAQSAGVTTEEADYFLNTGFTPDEVQPERAVAMMVTKRVARLLVLGAGVTNSGLSAAGQTSIPTGWGCCCCS 224 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig77.18955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig77.18955.1 >prot_F-serratus_M_contig77.18955.1 ID=prot_F-serratus_M_contig77.18955.1|Name=mRNA_F-serratus_M_contig77.18955.1|organism=Fucus serratus male|type=polypeptide|length=194bp MQGAGGRSSGRVGPTLNAGGTSNPPRGPAGGGSSARSNPTLSTGGVSSGRback to top mRNA from alignment at F-serratus_M_contig77:636810..638265- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig77.18955.1 ID=mRNA_F-serratus_M_contig77.18955.1|Name=mRNA_F-serratus_M_contig77.18955.1|organism=Fucus serratus male|type=mRNA|length=1456bp|location=Sequence derived from alignment at F-serratus_M_contig77:636810..638265- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig77:636810..638265- >mRNA_F-serratus_M_contig77.18955.1 ID=mRNA_F-serratus_M_contig77.18955.1|Name=mRNA_F-serratus_M_contig77.18955.1|organism=Fucus serratus male|type=CDS|length=1164bp|location=Sequence derived from alignment at F-serratus_M_contig77:636810..638265- (Fucus serratus male)back to top |