mRNA_F-serratus_M_contig77.18953.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: D7FWG2_ECTSI (SAM-dependent methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG2_ECTSI) HSP 1 Score: 311 bits (797), Expect = 1.320e-99 Identity = 192/371 (51.75%), Postives = 232/371 (62.53%), Query Frame = 1
Query: 25 ERAQLHRLDRLQEVANLALEDRAEEGE-PWGCADIGTDHGLLAICLHANGASVVAGDRAVSPLDVARQNVRLYVSRARLLPGTCIPPERTTGGMMEHNAYHRGIPQQEERREMCRRV--------------------PPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTALGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAESASGAHADERDKTPAAMASSDLMGGL--QDRSDWLGDFLPARATDPRQLRDSGRAEARREAVNFLAYLRHQRDWLRAIEQARSQNS-GETNE-VSSTLTSVGVEGVLVA 1062
ERA L RLDRLQEVA+LALEDR E G +GCADIGTDHGLLAICLHANGA+V+AGDRA PL+VARQN +LY+ A+ P + + G + G P + R + P LE RLG+GL+VLE+GE DTVCIAG+GV+TM++IL+ S SS ++ S R P L+ LGV RLVLQPMDARL+YMR LR WLREN WRITQE IVST GKGGR AF+TLRA+ + + D+ + + G+ ++ SDWLGDFLP+R D QLR GR R+EA FLAYLRHQRDWL AIE+ARS+ S G T E ST S GV+ VL A
Sbjct: 73 ERAPLQRLDRLQEVADLALEDRVESGGGSFGCADIGTDHGLLAICLHANGANVIAGDRAAGPLNVARQNAKLYLRHAQQAPFSVLTTAAAERGAPAGKSECTGTPDATAE-TLLRPINEGSSGEGVGNDGAVADGVFPRLECRLGDGLAVLEQGEADTVCIAGVGVKTMIQILSTSTS------DSSVDVTDSPESSHGRGVPALSRLGVRRLVLQPMDARLEYMRDLRVWLRENGWRITQEKIVSTLGKGGRHAFLTLRADCTETLRSLKSDQGVPPFSGPEWPTGMPQEEWSDWLGDFLPSRTMDSDQLRIGGRGTERQEASTFLAYLRHQRDWLTAIERARSRTSRGVTAERQDSTAVSEGVDSVLRA 436
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: A0A6H5JHI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI9_9PHAE) HSP 1 Score: 302 bits (773), Expect = 5.700e-96 Identity = 193/376 (51.33%), Postives = 223/376 (59.31%), Query Frame = 1
Query: 25 ERAQLHRLDRLQEVANLALEDRAEEGE-PWGCADIGTDHGLLAICLHANGASVVAGDRAVSPLDVARQNVRLYVSRARLLP----GTCIPPERTTGGMMEH---------------NAYHRGIPQQEERREMCRRVPPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTALGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAE--------SASGAHADERDKTPAAMASSDLMGGLQDRSDWLGDFLPARATDPRQLRDSGRAEARREAVNFLAYLRHQRDWLRAIEQARSQNSGETNEVS--STLTSVGVEGVLVA 1062
ERA L RLDRLQEVA+LALEDR E G +GCADIG DHGLLAICLHANGA+V+AGDRA PL++AR+N RLY+ RA+ P T G E+ N G E VP LE RLG+GL+VLEEGE DTVCIAG+GV+T+++IL+ S SS +Q S R + L+ LGV RLVLQPMDARL+YMR LR WLR N WRI QE IVST GKGGR AF+TLRA+ S G + PA M + SDWLGDFLP+R D QLRD GR R+EA FLAYLRHQRDWL AIE+ARS+ S S ST S V VL A
Sbjct: 76 ERAPLQRLDRLQEVADLALEDRVESGGGSFGCADIGADHGLLAICLHANGANVIAGDRAAGPLNIARENARLYLRRAQQAPFSVLATAAAQRIAPAGKSEYTRTPDPTAETLPQPINEGSSGDGVGNEGAVAHGVVPRLECRLGDGLAVLEEGEADTVCIAGVGVKTIIQILSASTS------DSSGDAANSQESSHGRGASALSRLGVRRLVLQPMDARLEYMRDLRVWLRGNGWRIAQEKIVSTLGKGGRHAFLTLRADCMEMSSVKSDQGVSPFSGPEWPAGMPQGEW-------SDWLGDFLPSRTMDSNQLRDGGRDTERQEAFTFLAYLRHQRDWLTAIERARSRTSRRVTAESQDSTAVSEAVGSVLRA 438
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: A0A0G4FDX8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FDX8_VITBC) HSP 1 Score: 81.6 bits (200), Expect = 1.040e-13 Identity = 78/263 (29.66%), Postives = 115/263 (43.73%), Query Frame = 1
Query: 73 LALEDRAEEGEPWGCADIGTDHGLLAICLHANGA--SVVAGDRAVSPLDVARQNV-RLYVSRARLLPGTCIPPERTTGGMMEHNAYHRGIPQQEERREMCRRVPPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTALGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAESASGAHADERDKTPAAMASSDLMGGLQDRSDWLGD 852
+ L + G P ADIG DHGLLA L +G + +A DR+ S + AR V R +S A +++R G+GL+ L GEVDTVC+AG+GV ++ IL G P+A SR L +L + LV+QP RL + LR WL+ + W I +E +V G+R ++T++A A+ A +RD +A +L+ G R+ W D
Sbjct: 82 ITLAELIPPGSP--AADIGCDHGLLAAHLVHSGRCPNAIAIDRSSSSCEAARSTVERFALSHA------------------------------------------VDVRQGDGLTALSAGEVDTVCVAGMGVGGILDILK--------------GPPQADSDPLSREDSLLRSLRIRTLVVQPQTPRLGSLYALRRWLQVHQWPINEERLVVI----GKRLYVTIKAV-ATQPRAVDRDAVLSADIERELLLG---RAQWESD 278
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: A0A1K1PMV1_SELRU (tRNA (Adenine22-N1)-methyltransferase n=5 Tax=Selenomonas TaxID=970 RepID=A0A1K1PMV1_SELRU) HSP 1 Score: 79.7 bits (195), Expect = 1.170e-13 Identity = 80/242 (33.06%), Postives = 103/242 (42.56%), Query Frame = 1
Query: 37 LHRLDRLQEVANLALEDRAEEGEPWGCADIGTDHGLLAICLHANGAS--VVAGDRAVSPLDVARQNVRLYVSRARLLPGTCIPPERTTGGMMEHNAYHRGIPQQEERREMCRRVPPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTALGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAESAS 756
+H DRLQ AL D +EG ADIGTDHG LA+ L G + VVAGD P + A++ V E G EE+ + +R+G+GL VL+ GEVDTVCIAG+G M IL ASP +TA + LVLQPM+ + LR WL E+DW I E +V G R + ++AE S
Sbjct: 1 MHLDDRLQ-----ALADFVQEGSR--AADIGTDHGYLAVALLQQGKADFVVAGDLNRGPYEAAKRTVH----------------ENAIG---------------EEQ---------ISVRIGDGLKVLQPGEVDTVCIAGMGGILMNNILE--------------------------ASPEITA-ELKTLVLQPMNGAPE----LREWLYEHDWHIVDENLVIDDG----RIYEIIKAEKGS 160
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: A0A7S2SUM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM0_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 5.360e-13 Identity = 93/308 (30.19%), Postives = 121/308 (39.29%), Query Frame = 1
Query: 52 RLQEVANLALED-RAEEGEPWGCADIGTDHGLLAICLHAN---GASVVAGDRAVSPLDVARQNVRLYVSRARLLPGTCIPPERTTGGMMEHNAYHRGIPQQEERREMCRRVPPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTALGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAESASGAHADERDKTPAAMASSDLMGGLQDRSDWLGDFLPARATDPRQLRDSGRAEARREAVNFLAYLRHQRDW 963
RLQ VA+L D RA ADIG DH LL + L A+ G VA DR +PL+ R+ + L PG V L+ RLG+GLS L EGEVDTVC+AG+GV +++++L G E R L LGV LVLQP+ R + LR WL + I E I G +IT RA R + +A + GDF + R L +G +E EA N+L Y+ H W
Sbjct: 39 RLQAVASLVPRDCRA-------IADIGADHALLCMDLVASKRPGLRAVAIDRNRAPLEAGRK-----AALQHLAPGM---------------------------------VKQLDFRLGDGLSPLSEGEVDTVCVAGMGVSSILRVLG--------------AGGEPGR---------LGTLGVDTLVLQPVSPRPAALHGLRKWLDSQGYTIDAEVISRVKGL----FYITTRAR---------RSAEKSFIAPGE------------GDFFLPQLIRRRALAGAG-SEGDDEAENYLRYVSHHLRW 252
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: UPI00047FB77A (class I SAM-dependent methyltransferase n=1 Tax=Selenomonas sp. AE3005 TaxID=1485543 RepID=UPI00047FB77A) HSP 1 Score: 77.4 bits (189), Expect = 7.710e-13 Identity = 79/245 (32.24%), Postives = 105/245 (42.86%), Query Frame = 1
Query: 37 LHRLDRLQEVANLALEDRAEEGEPWGC--ADIGTDHGLLAICLHANG--ASVVAGDRAVSPLDVARQNVRLYVSRARLLPGTCIPPERTTGGMMEHNAYHRGIPQQEERREMCRRVPPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTA-LGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAESAS 756
+H +RLQ +A+ P GC ADIGTDHG LA L G A VVAGD+ P + A + V+ +ME+ + +RLG+GL+VL+ GEVDTVCIAG+G + IL EAQ P +TA LG LVLQPM+ + LR WL +N W I+ E +V G R + ++AE S
Sbjct: 1 MHLDERLQALADFV---------PEGCRAADIGTDHGYLAAALIQQGKAAFVVAGDKNRGPYEAAIRTVKEQA-------------------LMENQ---------------------IAVRLGDGLAVLQPGEVDTVCIAGMGGVLIASIL------------------EAQ--------PEVTAALGT--LVLQPMNGAAE----LREWLYDNAWHISDENLVIADG----RIYEVIKAEKGS 160
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: UPI00040E19B4 (class I SAM-dependent methyltransferase n=1 Tax=Selenomonas ruminantium TaxID=971 RepID=UPI00040E19B4) HSP 1 Score: 72.4 bits (176), Expect = 4.430e-11 Identity = 73/244 (29.92%), Postives = 99/244 (40.57%), Query Frame = 1
Query: 37 LHRLDRLQEVANLALEDRAEEGEPWGC--ADIGTDHGLLAICL--HANGASVVAGDRAVSPLDVARQNVRLYVSRARLLPGTCIPPERTTGGMMEHNAYHRGIPQQEERREMCRRVPPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTALGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAESAS 756
+H DRLQ +A+ P G ADIGTDHG LA+ L VVAGD+ P + A++ V Y I E+ + +RLG+GL V++ GEVDTVCIAG+G M IL ASP +T + LVLQPM+ + LR WL +++W I E +V G R + ++AE S
Sbjct: 1 MHLDDRLQALADFV---------PQGARAADIGTDHGYLAVALIQQEKADFVVAGDKNRGPYEAAKRTVHEYA----------ISEEQ------------------------------ISVRLGDGLEVVKPGEVDTVCIAGMGGILMNTILE--------------------------ASPEVTE-ALKTLVLQPMNGAPE----LREWLYDHEWHIVDENLVIDDG----RIYEIIKAEKGS 160
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: A0A5D6W292_9FIRM (SAM-dependent methyltransferase n=2 Tax=unclassified Selenomonas TaxID=2637378 RepID=A0A5D6W292_9FIRM) HSP 1 Score: 71.2 bits (173), Expect = 1.120e-10 Identity = 76/237 (32.07%), Postives = 99/237 (41.77%), Query Frame = 1
Query: 49 DRLQEVANLALEDRAEEGEPWGC--ADIGTDHGLLAICL-HANGAS-VVAGDRAVSPLDVARQNVRLYVSRARLLPGTCIPPERTTGGMMEHNAYHRGIPQQEERREMCRRVPPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTALGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAE 747
DRLQ +A+ P GC ADIGTDHG LAI L N A+ VVAGD P + A++ V + GI E+R + +RLG GL VL GEVDTVCIAG+G M +IL S + L L VLQPM+ ++ LRAWL ++ W IT E++ G R + ++AE
Sbjct: 5 DRLQALADFV---------PKGCRAADIGTDHGYLAIDLIRENKATFVVAGDLNQGPYEAAKRTV-----------------------------HENGIA--EDR---------ISVRLGNGLEVLTPGEVDTVCIAGMGGILMTQILEQSMA----------------------VTDTLKTL-----VLQPMNGAME----LRAWLYQHKWHITDESLAVDDG----RLYEIIKAE 157
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: A0A1I3CCE8_SELRU (tRNA (Adenine22-N1)-methyltransferase n=2 Tax=Selenomonas TaxID=970 RepID=A0A1I3CCE8_SELRU) HSP 1 Score: 70.9 bits (172), Expect = 1.530e-10 Identity = 73/237 (30.80%), Postives = 91/237 (38.40%), Query Frame = 1
Query: 49 DRLQEVANLALEDRAEEGEPWGC--ADIGTDHGLLAICLHANGAS--VVAGDRAVSPLDVARQNVRLYVSRARLLPGTCIPPERTTGGMMEHNAYHRGIPQQEERREMCRRVPPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTALGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAE 747
DRLQ +A+ P GC ADIGTDHG LAI L G + VVAGD P + A++ V E + +RLG GL VLE GEVDTVCIAG+G M +IL S P+ + LT L VLQPM+ + LR WL W I E + G R + ++AE
Sbjct: 5 DRLQALADFV---------PVGCRAADIGTDHGYLAIDLIREGKANFVVAGDLNEGPYEAAKRTVH----------------------------------------ENAMDADQISVRLGNGLQVLEPGEVDTVCIAGMGGVLMTQILEQS--------------PDVVK--------KLTTL-----VLQPMNGAPE----LRTWLYRQGWHIADEALAVADG----RIYEIIKAE 157
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Match: A0A6I2UZ40_9FIRM (SAM-dependent methyltransferase n=1 Tax=Selenomonas montiformis TaxID=2652285 RepID=A0A6I2UZ40_9FIRM) HSP 1 Score: 70.9 bits (172), Expect = 1.530e-10 Identity = 70/236 (29.66%), Postives = 96/236 (40.68%), Query Frame = 1
Query: 52 RLQEVANLALEDRAEEGEPWGC--ADIGTDHGLLAICLHANGAS--VVAGDRAVSPLDVARQNVRLYVSRARLLPGTCIPPERTTGGMMEHNAYHRGIPQQEERREMCRRVPPLELRLGEGLSVLEEGEVDTVCIAGLGVRTMVKILADSNGGRRSGRSSSFGGPEAQRSWRSRASPNLTALGVHRLVLQPMDARLDYMRCLRAWLRENDWRITQETIVSTPGKGGRRAFITLRAE 747
RLQ VA+ P G ADIGTDHG LA L +G + V+A D+ P + A + +R Y G+ + + +R G+GL L GEVDTVCIAG+G M++IL ++SP++ A + LVLQP A D LR WL +N W I E++V G R + +RAE
Sbjct: 6 RLQAVADFV---------PMGSRVADIGTDHGYLAAELLRSGRAKYVIASDKNAGPYEAAVRTIREY-------------------GLTDE---------------------VVSVRQGDGLKSLSSGEVDTVCIAGMGGTLMIEIL--------------------------KSSPDIVA-NLDVLVLQPQSASAD----LRRWLYQNHWHIADESLVLDDG----RLYEIIRAE 157 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig77.18953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig77.18953.1 >prot_F-serratus_M_contig77.18953.1 ID=prot_F-serratus_M_contig77.18953.1|Name=mRNA_F-serratus_M_contig77.18953.1|organism=Fucus serratus male|type=polypeptide|length=354bp ELPSVRDGERAQLHRLDRLQEVANLALEDRAEEGEPWGCADIGTDHGLLAback to top mRNA from alignment at F-serratus_M_contig77:583663..585860- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig77.18953.1 ID=mRNA_F-serratus_M_contig77.18953.1|Name=mRNA_F-serratus_M_contig77.18953.1|organism=Fucus serratus male|type=mRNA|length=2198bp|location=Sequence derived from alignment at F-serratus_M_contig77:583663..585860- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig77:583663..585860- >mRNA_F-serratus_M_contig77.18953.1 ID=mRNA_F-serratus_M_contig77.18953.1|Name=mRNA_F-serratus_M_contig77.18953.1|organism=Fucus serratus male|type=CDS|length=2124bp|location=Sequence derived from alignment at F-serratus_M_contig77:583663..585860- (Fucus serratus male)back to top |