prot_F-serratus_M_contig767.18928.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig767.18928.1
Unique Nameprot_F-serratus_M_contig767.18928.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length108
Homology
BLAST of mRNA_F-serratus_M_contig767.18928.1 vs. uniprot
Match: D8LH37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH37_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 2.270e-15
Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 0
Query:    2 TASHKWLYGTIMLFVFRPLLVDIKNMEKYFTHAKVSEVRARLDTTRDG-TRRALLEMVQASSALSHAIRSPSFCDREITTLDMLSKDVVYATHKVLGRPAAKQTSHAL 108
            T S KW   +IML VFRP+LV  KNM++      V+++R    T  DG     L ++VQ +S LS+A+R+PS  DRE++ LD+L++DVV    KV+GR  ++ T H++
Sbjct:   27 TGSDKWTLQSIMLLVFRPVLVMKKNMKRQ----DVNDLREMWGT--DGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVVGFYSKVMGRTGSRPTIHSI 128          
BLAST of mRNA_F-serratus_M_contig767.18928.1 vs. uniprot
Match: A0A6H5K953_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K953_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 3.420e-9
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 0
Query:    1 YTASHKWLYGTIMLFVFRPLLVDIKNMEKYFT----HAKVSEVRARLDTTRDGTRRALLEMVQASSALSHAIRSPSFCDREITTLDMLSKDVVYATHKVLGRPAAKQTSH 106
            YT SHK L+G++ L VFR LL  +  M  Y +     A+  EV  RL+   +G    L + +QASSAL+ A R   F D ++  L + + D+V  +   LGR   K T H
Sbjct:  464 YTGSHKGLFGSVQLIVFRGLLASVGAMRHYLSSNALRAQNIEVWGRLND--EGVLDRLRQYLQASSALTFAARGQVFSDSDLVELHVRAGDMVENSKLTLGREGVKTTMH 571          
BLAST of mRNA_F-serratus_M_contig767.18928.1 vs. uniprot
Match: D7G6M3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M3_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.010e-6
Identity = 32/88 (36.36%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    2 TASHKWLYGTIMLFVFRPLLVDIKNMEKYFTHAKVSEVRARLDTTRDGTRRALLEMVQASSALSHAIRSPSFCDREITTLDMLSKDVV 89
            T S KWL  +I+L VFR +      ME Y    ++ E+     + ++  R +LL++VQA+S+LS A+R+PS+ D EI  L   ++D++
Sbjct:  212 TGSDKWLLASIVLLVFRAVFHTTATMEMYIKGRELGELVDDYGSMQEA-RDSLLQLVQAASSLSFALRAPSYNDVEIEQLHKHAQDMI 298          
BLAST of mRNA_F-serratus_M_contig767.18928.1 vs. uniprot
Match: A0A6H5JWQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ6_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 4.260e-6
Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 0
Query:    3 ASHKWLYGTIMLFVFRPLLVDIKNMEKYFTHAKVSEVRARLDTTRDGTRRALL----EMVQASSALSHAIRSPSFCDREITTLDMLSKDVVYATHKVLGRPAAKQTSHA 107
             S KWL G+I+L V R +L D   +++Y    K  E++A  DT   G  +A+L    +++Q +SAL+ A+RSPSF   E   L   ++D V    ++LGR   + T H+
Sbjct:  434 GSDKWLLGSILLLVSRCVLHDATALKEY---VKPRELQALKDTW--GGEQAVLAQLRKLLQVASALTFAVRSPSFYKAERKKLMEHARDTVGVYAELLGRGGVRTTVHS 537          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig767.18928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LH37_ECTSI2.270e-1542.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K953_9PHAE3.420e-937.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6M3_ECTSI1.010e-636.36Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JWQ6_9PHAE4.260e-635.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig767contigF-serratus_M_contig767:5186..6097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig767.18928.1mRNA_F-serratus_M_contig767.18928.1Fucus serratus malemRNAF-serratus_M_contig767 5185..6097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig767.18928.1 ID=prot_F-serratus_M_contig767.18928.1|Name=mRNA_F-serratus_M_contig767.18928.1|organism=Fucus serratus male|type=polypeptide|length=108bp
YTASHKWLYGTIMLFVFRPLLVDIKNMEKYFTHAKVSEVRARLDTTRDGT
RRALLEMVQASSALSHAIRSPSFCDREITTLDMLSKDVVYATHKVLGRPA
AKQTSHAL
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