prot_F-serratus_M_contig766.18923.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig766.18923.1
Unique Nameprot_F-serratus_M_contig766.18923.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length172
Homology
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Match: D7G3M8_ECTSI (Similar to metal response element-binding transcription factor-1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M8_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 2.030e-64
Identity = 113/156 (72.44%), Postives = 122/156 (78.21%), Query Frame = 0
Query:    2 YNYRQHRCPQPDCGWVFDRASKLAAHEKTHLARFRCQFEGCGKAFVLASGLNLHLKDEHPFLCSVCDMVFDREDVLHKHMGTHRRAGDGGFVRLYSCNAPGCGKAFTEKRNFNVHRRATHTEGGRKKFRXXXXXXXXXXXXRHSLVKHVMREHKTS 157
            +N RQHRC    CG  FDR SKLAAHEKTH ARF CQF+GCG AFVLASGLNLHLK++HPF C VCD VFDRED +  H  TH RAGDG F+R Y CN  GCGKAFTEKRN N HRR  HTEGGRK+FRXXXXXXXXXXXX    VKHV REH++S
Sbjct:  368 FNSRQHRCSHAGCGRSFDRPSKLAAHEKTHKARFVCQFDGCGAAFVLASGLNLHLKEKHPFRCGVCDKVFDREDKMQIHQATHARAGDGDFIRPYHCNVRGCGKAFTEKRNLNAHRRTAHTEGGRKRFRXXXXXXXXXXXXXXXXVKHVKREHQSS 523          
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Match: A0A1B9I1D6_9TREE (Uncharacterized protein n=1 Tax=Kwoniella pini CBS 10737 TaxID=1296096 RepID=A0A1B9I1D6_9TREE)

HSP 1 Score: 63.5 bits (153), Expect = 1.190e-8
Identity = 40/125 (32.00%), Postives = 57/125 (45.60%), Query Frame = 0
Query:    5 RQHRCPQPDCGWVFDRASKLAAHEKTHLAR----FRCQFEGCGKAFVLASGLNLHLKDEHP---FLCSVCDMVFDREDVLHKHMG-THRRAGDGGFVRLYSCNAPGCGKAFTEKRNFNVHRRATH 121
            R H+CP+  CG  + RAS L AH +THL+     F+C+ EGC KA                   + C VCD  F +  +L +H    H   G     +++ C   GC K+F  K +   H + TH
Sbjct:  101 RPHKCPE--CGQSYLRASHLTAHMRTHLSADAKPFKCEREGCDKAXXXXXXXXXXXXXXXXXEVYPCHVCDQTFTKAHLLREHHALVHMPEG----TKVFQCPHEGCDKSFNMKAHLRAHEK-TH 218          
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Match: A0A2H3J7B5_WOLCO (Uncharacterized protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J7B5_WOLCO)

HSP 1 Score: 57.8 bits (138), Expect = 1.170e-6
Identity = 30/86 (34.88%), Postives = 39/86 (45.35%), Query Frame = 0
Query:   34 RFRCQFEGCGKAFVLASGLNLHLKD---EHPFLCSVCDMVFDREDVLHKHMGTHRRAGDGGFVRLYSCNAPGCGKAFTEKRNFNVH 116
            R+RC+FEGC KA+   S L  H +    + PF+CSVC               TH  A      R + C  PGCGK F   ++   H
Sbjct:   59 RYRCEFEGCEKAYTKPSRLAEHQRSHTGDRPFVCSVCKXXXXXXXXXXXXXXTHLPAS----ARQFVCEEPGCGKRFWTSQHLRAH 140          
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Match: A0A0P5EBN9_9CRUS (Transcription factor IIIA n=3 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5EBN9_9CRUS)

HSP 1 Score: 53.9 bits (128), Expect = 2.220e-5
Identity = 42/180 (23.33%), Postives = 64/180 (35.56%), Query Frame = 0
Query:    7 HRCPQPDCGWVFDRASKLAAHEKTH--LARFRCQFEGCGKAFVLASGLNLHLKDEHPF-----------------------------LCSVCDMVFDREDVLHKHMGTHRRAGDGGFVRLYSCNAPGCGKAFTEKRNFNVHRRATHTEGGRKKFRXXXXXXXXXXXXRHSLVKHVMREHK 155
            H    P C   F +  +L  H+  H  +  ++C++EGCGK F+L S L  H K    +                             +C++C+  F R   L  H   H+   +     ++ C    C + F  K N   H    H  G   +F+            + SLV H  R HK
Sbjct:  136 HALKCPSCEKTFKKNQQLKIHQYQHTGILPYQCEYEGCGKHFLLPSRLRAHAKTHKGYVXXXXXXXXXXXXXXXXXXXKLEAHAQKHICTICNSTFKRPGFLKSHQKMHQATRE-----VFHCPFESCLRKFYYKNNLKSHIDNYHNPG---QFQCKQEGCGKVFIRKASLVSHAAR-HK 306          
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Match: A0A7R9LC92_9ACAR (Hypothetical protein n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9LC92_9ACAR)

HSP 1 Score: 52.4 bits (124), Expect = 7.830e-5
Identity = 33/135 (24.44%), Postives = 56/135 (41.48%), Query Frame = 0
Query:    6 QHRCPQPDCGWVFDRASKLAAHEKTHLA--RFRCQFEGCGKAFVLASGLNLHLKDEHP-------------------FLC--SVCDMVFDREDVLHKHMGTHRRAGDGGFVRLYSCNAPGCGKAFTEKRNFNVHR 117
            +H CP   C  +     +L  H + H+    ++C++EGC +AF  +SGL  H K  H                    ++C  + C + F     +   +G H  A   G  R+++C+  GC + F      N H+
Sbjct:  143 RHSCPVEGCAKILTTPLRLKWHVRNHVRGKTYKCEYEGCDRAFRDSSGLRSHKKCRHESPKMRWHSNQQYFDANTQTYICPHAECGLTF----AVRTKLGLHLMARHSG--RVFACDHVGCDRVFKSSDGLNDHK 271          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G3M8_ECTSI2.030e-6472.44Similar to metal response element-binding transcri... [more]
A0A1B9I1D6_9TREE1.190e-832.00Uncharacterized protein n=1 Tax=Kwoniella pini CBS... [more]
A0A2H3J7B5_WOLCO1.170e-634.88Uncharacterized protein n=1 Tax=Wolfiporia cocos (... [more]
A0A0P5EBN9_9CRUS2.220e-523.33Transcription factor IIIA n=3 Tax=Daphnia magna Ta... [more]
A0A7R9LC92_9ACAR7.830e-524.44Hypothetical protein n=1 Tax=Medioppia subpectinat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 96..121
e-value: 0.0022
score: 27.3
coord: 129..154
e-value: 0.0092
score: 25.2
coord: 7..31
e-value: 0.0017
score: 27.6
coord: 62..84
e-value: 0.021
score: 24.0
coord: 35..60
e-value: 0.0058
score: 25.9
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 63..84
e-value: 0.0092
score: 16.4
coord: 129..154
e-value: 0.0016
score: 18.8
coord: 7..31
e-value: 1.2E-4
score: 22.4
coord: 96..121
e-value: 5.1E-4
score: 20.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 64..84
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 131..154
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 37..60
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 98..121
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 9..31
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 7..31
score: 10.138
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 35..60
score: 10.325
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 62..84
score: 9.203
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 96..122
score: 12.196
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 129..159
score: 10.284
NoneNo IPR availableGENE3D3.30.160.60coord: 34..59
e-value: 3.7E-5
score: 25.6
coord: 4..31
e-value: 1.7E-6
score: 29.9
NoneNo IPR availableGENE3D3.30.160.60coord: 124..167
e-value: 1.9E-5
score: 26.3
NoneNo IPR availableGENE3D3.30.160.60coord: 60..123
e-value: 8.7E-12
score: 46.9
NoneNo IPR availablePANTHERPTHR46179FAMILY NOT NAMEDcoord: 5..157
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 58..116
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 121..152
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 6..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig766contigF-serratus_M_contig766:251961..259222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig766.18923.1mRNA_F-serratus_M_contig766.18923.1Fucus serratus malemRNAF-serratus_M_contig766 251330..259320 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig766.18923.1 ID=prot_F-serratus_M_contig766.18923.1|Name=mRNA_F-serratus_M_contig766.18923.1|organism=Fucus serratus male|type=polypeptide|length=172bp
MYNYRQHRCPQPDCGWVFDRASKLAAHEKTHLARFRCQFEGCGKAFVLAS
GLNLHLKDEHPFLCSVCDMVFDREDVLHKHMGTHRRAGDGGFVRLYSCNA
PGCGKAFTEKRNFNVHRRATHTEGGRKKFRCEASGCGMMFVHRHSLVKHV
MREHKTSRSPAAASAAAPPAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf