mRNA_F-serratus_M_contig766.18923.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig766.18923.1
Unique NamemRNA_F-serratus_M_contig766.18923.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Match: D7G3M8_ECTSI (Similar to metal response element-binding transcription factor-1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M8_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 2.460e-76
Identity = 131/185 (70.81%), Postives = 146/185 (78.92%), Query Frame = 3 
Query:   15 KRVAKVCGAAFAKRWQLREHLYQAHGETMYNYRQHRCPQPDCGWVFDRASKLAAHEKTHLARFRCQFEGCGKAFVLASGLNLHLKDEHPFLCSVCDMVFDREDVLHKHMGTHRRAGDGGFVRLYSCNAPGCGKAFTEKRNFNVHRRATHTEGGRKKFRXXXXXXXXXXXXRHSLVKHVMREHKTS 569
            +RV  VCGA+FAK+WQLREHL+  HG++ +N RQHRC    CG  FDR SKLAAHEKTH ARF CQF+GCG AFVLASGLNLHLK++HPF C VCD VFDRED +  H  TH RAGDG F+R Y CN  GCGKAFTEKRN N HRR  HTEGGRK+FRXXXXXXXXXXXX    VKHV REH++S
Sbjct:  339 QRVLGVCGASFAKKWQLREHLFAEHGQSKFNSRQHRCSHAGCGRSFDRPSKLAAHEKTHKARFVCQFDGCGAAFVLASGLNLHLKEKHPFRCGVCDKVFDREDKMQIHQATHARAGDGDFIRPYHCNVRGCGKAFTEKRNLNAHRRTAHTEGGRKRFRXXXXXXXXXXXXXXXXVKHVKREHQSS 523
[Close]
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Match: A0A2H3J7B5_WOLCO (Uncharacterized protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J7B5_WOLCO)

HSP 1 Score: 57.8 bits (138), Expect = 2.150e-5
Identity = 30/86 (34.88%), Postives = 39/86 (45.35%), Query Frame = 3 
Query:  198 RFRCQFEGCGKAFVLASGLNLHLKD---EHPFLCSVCDMVFDREDVLHKHMGTHRRAGDGGFVRLYSCNAPGCGKAFTEKRNFNVH 446
            R+RC+FEGC KA+   S L  H +    + PF+CSVC               TH  A      R + C  PGCGK F   ++   H
Sbjct:   59 RYRCEFEGCEKAYTKPSRLAEHQRSHTGDRPFVCSVCKXXXXXXXXXXXXXXTHLPAS----ARQFVCEEPGCGKRFWTSQHLRAH 140
[Close]
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Match: A0A0P5EBN9_9CRUS (Transcription factor IIIA n=3 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5EBN9_9CRUS)

HSP 1 Score: 55.8 bits (133), Expect = 6.620e-5
Identity = 47/208 (22.60%), Postives = 71/208 (34.13%), Query Frame = 3 
Query:   33 CGAAFAKRWQLREHLYQAHGETMYNYRQHRCPQPDCGWVFDRASKLAAHEKTH--LARFRCQFEGCGKAFVLASGLNLHLKDEHPF-----------------------------LCSVCDMVFDREDVLHKHMGTHRRAGDGGFVRLYSCNAPGCGKAFTEKRNFNVHRRATHTEGGRKKFRXXXXXXXXXXXXRHSLVKHVMREHK 563
            C   F  R ++  H    H         H    P C   F +  +L  H+  H  +  ++C++EGCGK F+L S L  H K    +                             +C++C+  F R   L  H   H+   +     ++ C    C + F  K N   H    H  G   +F+            + SLV H  R HK
Sbjct:  115 CRKQFVSRQKMELHHQSVHSA-------HALKCPSCEKTFKKNQQLKIHQYQHTGILPYQCEYEGCGKHFLLPSRLRAHAKTHKGYVXXXXXXXXXXXXXXXXXXXKLEAHAQKHICTICNSTFKRPGFLKSHQKMHQATRE-----VFHCPFESCLRKFYYKNNLKSHIDNYHNPG---QFQCKQEGCGKVFIRKASLVSHAAR-HK 306
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig766.18923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G3M8_ECTSI2.460e-7670.81Similar to metal response element-binding transcri... [more]
A0A2H3J7B5_WOLCO2.150e-534.88Uncharacterized protein n=1 Tax=Wolfiporia cocos (... [more]
A0A0P5EBN9_9CRUS6.620e-522.60Transcription factor IIIA n=3 Tax=Daphnia magna Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig766contigF-serratus_M_contig766:251330..259320 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score63.5
Seed ortholog evalue1.1e-07
Seed eggNOG ortholog63405.XP_002846147.1
KEGG koko:K09191
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Zinc finger, C2H2 type
EggNOG OGs20CNW@147545,39CGA@33154,3B0AX@33183,3FWT5@34384,3NVT7@4751,3QRUF@4890,KOG1721@1,KOG1721@2759
Ec32 ortholog descriptionZinc finger C2H2-type/integrase DNA-binding domain
Ec32 orthologEc-24_001700.1
COG Functional cat.S
Best tax levelArthrodermataceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000,ko03021
Exons4
Model size1245
Cds size516
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig766.18923.1prot_F-serratus_M_contig766.18923.1Fucus serratus malepolypeptideF-serratus_M_contig766 251961..259222 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932297.8398986-UTR-F-serratus_M_contig766:251329..2519601622932297.8398986-UTR-F-serratus_M_contig766:251329..251960Fucus serratus maleUTRF-serratus_M_contig766 251330..251960 -
1690964240.838818-UTR-F-serratus_M_contig766:251329..2519601690964240.838818-UTR-F-serratus_M_contig766:251329..251960Fucus serratus maleUTRF-serratus_M_contig766 251330..251960 -
1622932297.9612424-UTR-F-serratus_M_contig766:259222..2593201622932297.9612424-UTR-F-serratus_M_contig766:259222..259320Fucus serratus maleUTRF-serratus_M_contig766 259223..259320 -
1690964240.9103212-UTR-F-serratus_M_contig766:259222..2593201690964240.9103212-UTR-F-serratus_M_contig766:259222..259320Fucus serratus maleUTRF-serratus_M_contig766 259223..259320 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932297.8722906-CDS-F-serratus_M_contig766:251960..2521071622932297.8722906-CDS-F-serratus_M_contig766:251960..252107Fucus serratus maleCDSF-serratus_M_contig766 251961..252107 -
1690964240.8534033-CDS-F-serratus_M_contig766:251960..2521071690964240.8534033-CDS-F-serratus_M_contig766:251960..252107Fucus serratus maleCDSF-serratus_M_contig766 251961..252107 -
1622932297.8883998-CDS-F-serratus_M_contig766:253253..2534341622932297.8883998-CDS-F-serratus_M_contig766:253253..253434Fucus serratus maleCDSF-serratus_M_contig766 253254..253434 -
1690964240.8636127-CDS-F-serratus_M_contig766:253253..2534341690964240.8636127-CDS-F-serratus_M_contig766:253253..253434Fucus serratus maleCDSF-serratus_M_contig766 253254..253434 -
1622932297.910763-CDS-F-serratus_M_contig766:256432..2566181622932297.910763-CDS-F-serratus_M_contig766:256432..256618Fucus serratus maleCDSF-serratus_M_contig766 256433..256618 -
1690964240.8804197-CDS-F-serratus_M_contig766:256432..2566181690964240.8804197-CDS-F-serratus_M_contig766:256432..256618Fucus serratus maleCDSF-serratus_M_contig766 256433..256618 -
1622932297.935348-CDS-F-serratus_M_contig766:259220..2592221622932297.935348-CDS-F-serratus_M_contig766:259220..259222Fucus serratus maleCDSF-serratus_M_contig766 259221..259222 -
1690964240.9002898-CDS-F-serratus_M_contig766:259220..2592221690964240.9002898-CDS-F-serratus_M_contig766:259220..259222Fucus serratus maleCDSF-serratus_M_contig766 259221..259222 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig766.18923.1

>prot_F-serratus_M_contig766.18923.1 ID=prot_F-serratus_M_contig766.18923.1|Name=mRNA_F-serratus_M_contig766.18923.1|organism=Fucus serratus male|type=polypeptide|length=172bp
MYNYRQHRCPQPDCGWVFDRASKLAAHEKTHLARFRCQFEGCGKAFVLAS
GLNLHLKDEHPFLCSVCDMVFDREDVLHKHMGTHRRAGDGGFVRLYSCNA
PGCGKAFTEKRNFNVHRRATHTEGGRKKFRCEASGCGMMFVHRHSLVKHV
MREHKTSRSPAAASAAAPPAV*
back to top

mRNA from alignment at F-serratus_M_contig766:251330..259320-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig766.18923.1 ID=mRNA_F-serratus_M_contig766.18923.1|Name=mRNA_F-serratus_M_contig766.18923.1|organism=Fucus serratus male|type=mRNA|length=7991bp|location=Sequence derived from alignment at F-serratus_M_contig766:251330..259320- (Fucus serratus male)
GGGGAGTGCCCGCGAAGCGCGTGGCGAAGGTGTGCGGAGCAGCCTTCGCG
AAGAGGTGGCAGCTGAGGGAGCACCTGTACCAGGCGCACGGCGAGACGAT
GTGAGAGACGGCGTTAGGCTTGTGAGATTGAGGGACTTTATTCCATGCAC
CGTCGCGCGGTTTTTCCTGACCAGCGTTGTATTCCCTCTGGGCACGTACA
GTACATACATGGGACAAGATTGACTTGGTGGGATCGCTGCGCTTAAGTCA
ATTGAGGACACGGTTTTATTTTTATACTTGACGACCAACAGCTTGGAGTT
CACGGCGGCCATCGATGTACACAAATAACACATACCCTGCTGATATTTGT
ACGGGGGGTTGTTTGGGGCTGCTCTTCCAGGTTGGTCTGATGTTTGTACC
GCAGGGCGGCAAGAGTGTAGCACCCCGCCTGGGACCGGTGACAGGTGTTC
CGTGCCTTTCCCTTCCATCCCCCCGGATGAATTTGGTGGGGGATAGGGTG
TGCAAAGCGTTTTATTTTTACTGCTGCGTTTTTCGGGGGCGGGGGGGGGG
GGGAGGGGTTGGGGAGCGTTTGGCCAGTTTCCTTCCAAAATCCAGTATCA
CCTTGGTTTGTGGGTTTCTTCCGTACACTACCGTACCGTCTTTGGGGGGG
GGGGGACTCTAGAATACATAGTGTTACAGTGCTGCCGGAAATGGCCTGAC
CAATGTTATTGAAAACCACACCTTTGTTCCTCGCGCACGTTATCTCAGAC
TCTGCTTCGATGTAACGGGAGTTAGGAACCGCTGTATCACTCTGTGTTGC
GTCTGTGCTCCGAGTTTTGTGACTCGAGATCGTTTTTGTGGCTCAATATT
AAAAAAAAAAGTATCCACGGCAAGAGTCCATGCATAAAAAAAATGCGGCG
AGATCAGGCAGGGAGCCCATTGCCTCGTGTATATACGAGTAAATCCCGAC
TTTGGCGACACAAAACATCTACCATTATCCATCGTTCGATGCGGCGACGA
AGGTGTAAACATATTTTCCGGGTATGCTTACGGCAGTGTGCGAGAGGTTC
GTTGCAGATTAAGAGCTTGTCCGCAACGAATCGTTATCTTCACCTCCCTA
ACAAATAGCCCTTATGGAATACTCTTTTCCTTGTTCAGCTGACCACGAGG
AGGATTGGCAACCTTACCCGGTTGATCCGTACTCTTGCTATGTGTGTGAG
GACTATGACCATACATGTTGGCTGAAATTACTCGACACAGAAGTTGTACT
TAGGCACTATACCCACACAGACGTTCTTTTTCAAAAGATCTCTTGTCTTG
TTTTTTAAGAGATATGATATCTGGTACACACGATGGTTACACGCACACAC
ATTTTGTCATGACGGACATCAATTAACCGACTCGACGGAAACGGCTGCCG
ACTCAACCTCTACGTAGAACATTGTGCATAGTGTCTTCTGTGGCAATGGT
CTCTCGCGATTGCCCGGGTGTGCACGGGTAGACGTGCTGCCGAACTGGGG
TGTGGTCTAAGTCCCGGGTAACCGCGCGTTCTAAAGATGATGCGGAGGTG
GGCAAAATGACGCACCAACCAACAGTAACTCAACTAACGAAAGCACACAA
AGCAAGATTGATCATTACCTGTCGACCTGTGACGTCTCCGTGCCTCCACT
GTCCGGCGGCTGTCTAGTAGCTCCAGTACACAACTACTGCTGTAGTCCAA
GGGTGTTCGCGAGATACCATGCTTTTTTTTTTTTTTTTTAACTACCCCCT
CTACGTATGCAAGCCTATAAATGATTGCAACCCGGCAGTACTGGTTAATA
GATAACGTCCTGTCACCTAGGATACGTACGATTTGACACGAGATGCCTAT
CGCGAGATGCCTATCGCGAGATTCAACCTCCCGCTTCTGGGATGTGTCGA
GACCCCCCCCCCCCCCACTGTGGCAGGGGCGTATTAGTGTGAGAGACCGC
CGCGTCTCTCGAGCTGAAGATCATGAAAACGGAGGGATCACTGTGCGTAA
TAGTGTTAGAGACCGCCGCGTCTCTCGAGCTGAAGATCATGAAAACGGAG
GGATCATGCACTTTTTTTATGTGCGTAATAGTGTTAGAGACCGCCGCGTC
TCTAGAGCTGAAGATCATGAAAACGGAGGGATCATGACTTTTTTTATGTG
CGTAATAGTGTTAGAGACCGCCGCGTCTCTCGAGCTGAAGATCATGAAAA
CGGAGGGATCATGCACTTTTTTTATGTGCGTAATAGTGTCAGAGACCGCC
GCGTCTCTCGAGCTGAAGATCATGAAAACGGAGGGATCATGTACTTTTTT
TTTATGTGTGTAGTAGTGTGAGAGACCGCCGCGTCTCTAGAGCTGAAGAT
CATGAAAACGGAGGGATCATGTACCTTTTTTTGCGCGTGTTAGTGTGGGA
GGCCGATGATGAAAATGGAGGGATTATGTACTTTTTCCTTCTTCTGTGTA
CAAATACGAGACGCTGCTGCGATTAATCGTCCACTCCGCCCCCTCTCTGT
CCCCCTTCCCCTCACGCCAAAACATCCCTCCCAACCACAAACATCCCTCC
CGCCCGCCTTCACGGCTCACGCGACTTTCTTGTGCTTGTTGCTCCGTCTC
TTGTTGAACGTGTTTGTCGGTTCCTGCCCCCGCTTTGTCACCGCCTGGCT
ACGGTGTGGTGTCGGGGGGCTTCGGGGGGGGGGTTTGGTGGCAATTGAGC
AGGTACAACTACCGGCAACATCGATGTCCACAGCCGGACTGCGGCTGGGT
GTTTGACCGCGCCAGCAAGCTTGCGGCGCACGAAAAGACCCACTTGGCGC
GGTTTCGGTGCCAGTTCGAGGGCTGCGGGAAGGCCTTCGTGCTCGCCTCC
GGCCTGAACCTCCACCTCAAGGATGAACATCCTTTCCTGTACGTGGTGTC
TATGTGTGTCTATTTGTGTGTGTATGTGTATTTATTAAATTGTACAGATG
TGTGTGTGTGTGTGTGTGTGTATTTATTGAATTGCACATGACCGCGCAAT
CCGGCCCTGTAATCCCCTCATTCTATGCTACTGCATGTAACCCATGTAAC
CCACCTGGGGGGTTGGCTGCTTTTCGTGGACATATTCTTGACTAGAAATG
CGCGTGCATCCAGCCCCGACTCCTCTCCCAACTACAACGGCGCTCGGCCG
GAACCCCACTCCCTCGACATCAACTAGTGGTACTGGTACAATGCTCTACG
CCGCTCTGCCCGGAGAAACATTGAGGGCACGAAAACGCGGAAACTGGTAG
ACAGGCTTGTCCCCCCCCAACGTTGTCCCTCCCCAACGCATGGGTAAAGC
TAGTTGCTCGCCGCTTAGCGCAGCAAATAGAGACGGGAATCCGACAATCA
GGGAACATCATGGCCGACTGTCCTTGTAACCTCCCCCGCCAAACCCAAAA
ATCTCGCCTCCCTCATCAAACCGTGCAACGTACTGCAGCAGTGGTGTCGT
CATTCCGCCCCCTTCCCCTTTCAGCACCCAATCGGTGCGCGTCCCGACTA
CATCCGCACATATTTTTTTTCGACGTGAGAAGATCCCCGCCAGCCATAGG
GCCCGGGGTGGAACATGTGTGTGTGTGTGTGTGTGTTTGAGTGTTTATTT
ATCAAATTATACTATACTTACTATGAAAACCCCTGATGAGACGCGACAAA
AGGTGACACACTCTCGTTGGCATATGTGTTTTTGTGTGTGTTTATTAAAT
TGTACATAACCGCGTAATCTAATCCTGTCATCCTAGCCATTCTATGCTAT
CGCATTGGTCCTCCCAAGGGGGCATCAATGATACTTTTCACGAGAACATG
TGTGTGTGTGTGTGTGTGTGCGTGTGTTTTTTTTATTAATTTTGCGCAGA
ACCGCGCAATCCGGCCCTGTCATCCTAGTCATTCTATGCCTCTCGTATTG
ATCCTCCCTAGGGGGGATCAATGATACTTATTATCAAAACCGTGTGTGTG
TGTGTGTGTGTGTGTGTGTATTTATTAATTTTGCACATAACCGCGCTATC
CGGCCCTGTCATCCTAGTCATTCTATGCCACTCGTATTGATCCTCCCAAG
GGGGGATCAATGATACTTACTACGAAAACCTCTGATCAGACGCGACAAAG
GCGACACACTCTCGTTGACATATGTGTGTGTGCGTATGTTTATTAAATTG
CACGTAACCACGCAATCCGGCCCTGACATCCTTGTCATTCTATACTATAT
CATAGTAATACTCGCATTGGTCCTCCCAAGACGCATTAGGGGATCAATGA
TTCTTATCTCGGCAGTGAACGCCATCGGTACGCAATTGCGCGACCCGATA
AACTCGGGACTTACCCGATGGCGTATGGCGGTTTAACATAAATATATGGA
CGCCGCCGCGGAACTCGGGAGGAATCCTCTAAGTAAGCACCAGATTCAGC
CTGAGCATGGAGATGAGCAGGCTGACGCGTGACGGTACTGCCGAAACCTT
CTCGCGAGACCAAATTCTCAGGCACGAACGCGGACCACGAGCAGGGGAAT
ATTATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCAG
GTTGATTCATACTTTTGCTATGTGTGAGACCATACATCGCCGGGACTTTC
AACATGCCCACTTCATACCAATAGTGGGTGTGGGAAAGAGAGGCGTATAT
TAATTGGTCCATAGTGATCTGCTCAGGCAGGACTCGTTCGGAACTACCTT
GAGGTTTACTGGCCCTGCGCCGGCGGACTCTCGGCAGTGAACGCCATCGG
TACGCAATTGCGTGACCCGATAAACTTGGAACTGACCTGATGGCGTATGG
TGGGTTTAAAATAAATATATGGACGCCACCGCGGAACTCGGGAGGAATTC
CGTAAGTAAGCACCAGGTTGAGCTTGAGTATGGAGATGAGCAGGCTGACG
CGGGACGGGACTGTCGAACACGTCTCGCGAGACCAAATTCTCAGGCACGA
ACGCGGACAGGGGAATACTCATTTTCCCTGTTCAGCTGACCACGAGCAGG
AATGGCAACCTTACCCGGTTGATCCATACTCTTGCTACATGTGTAGCCAT
ACAAACATTACGATAGCCTCTCTGTGTGTGTGTTTGACTGTGTGTTGTGT
GTGTATTGATTAAATTGTACATAACCGCATAATCCGGCTCTGTCATCCTA
GTCATTCTATGCCACTCCCATTGATCGTCCCAAGTGTGTGCGTGTGTATT
GATTAAATTGCTTAGAACCGCACAATCGCGGCCACTCCCATTGGTCCTAC
ATTTTTTGACAAGAGCCCTCTGATCAGACGTGTGAGTGTGGGTGTGTGTT
TGATTCCATCAATACCATTCGTCGCCCGAGTGGTCTAGTAGGTAACCTTG
CATACCTGCTAGTGCGGAAGTCGTGAGTTCGATTCTTAGCTTAAGCAGAA
TTTGTGTTCTTTCTTTCGTAACAGAAAGCGTGGGAACGTGAGTAAGTAAA
ATTCAACCATTGGTTGACGAGTTGTAAGAGTGCTGAACTTGCATCGCAAT
AAAAATTGCAAGGCGTGAACCGGGGAGAGATGGGAAGATCCTTTGTAACC
ACAGGCAGGATGGTAATTAGAGGTCCATCGGCTATAAGTGTGATTAAAAA
AAAAAAAAAAAAAGTATCCACATTCTACGCAGATTGTAGTTGTATCCCTT
CCCTATCATAACCCAGTATAATACAATATACTGTTGTAGTTAAGTAACTA
TGATTCCGTAGCGCAACAGATGCCAAAACATGACTGCTATACTATACCGT
ACTGTACTCTATCTATATAGAGCTAGAGCTATAGTAGAGTAGAGCTAGAC
GACGACGTGACATGACTAAATCGACACATATAACCTAAGGCTTTTAAGTA
ATGGGCACTTACGAGTATAAACACATGACTCGGCAGGTGCTCAGTGTGCG
ACATGGTCTTCGACAGAGAGGACGTGTTGCATAAGCACATGGGGACGCAC
CGTAGAGCAGGCGACGGAGGCTTCGTCCGACTCTACTCGTGTAACGCGCC
CGGATGCGGAAAGGCCTTCACCGAAAAGCGAAACTTCAACGTCCACCGCC
GGGCAACTCACACCGAGGCGAGTCGAGTCAGGACGGATGAAGAGGTATCC
CCCGCCCCCCTCCCCCCCTCCCCCCCCCCCCCCCCCCCGAAGAAAAAAAC
GGTTTTGGAGGAAGCAGGAGGGTGTTGTAACGTCTCGTGCTTCTTTTGGG
TCGACCATGCAGTGGCGGCACGCGTTACAACACCGTCTGGGTCTGGGTGC
ACGGAGAGGTTGTCGTGTGTGTGTGTGTGTGTGTGTATTTATTAAATTGC
ACATAACCGCGCAATCCGGCCCTGTCATCCTATTCATTCTATGCCACTCG
CATTGATCCTCCCGAGGGGGGATCAATGATACTTATGTGTGTGTGTATGT
GTGTGTGTGTATTTATTAAATTGCACATAACCGCGCAATCCGGCCCTGTC
ATCCTAGTCATTCTATGCCACTCGCATTGATCCTCCTGAGGGGGGATCAA
TGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATGTTCGTCGTTAA
AGGTGTAAACTACTGAAAATAAAATAAAACCAAAATAAAATAAAACCAAA
ATAAAATAAAACCAAAATAAAATAAAATCAAAATAAAATAAAACGAAAGA
ATATCGCGTTTTTCGCGGCGAGACTCGCTAGGATAAATGTTTTTGCTTTG
CTTTGTTTTGTTTTTTGGCATTGTTTTTTTTAGATGGGGGGAGTCGGGAT
TGTACCTTTCCGTCGAGTGGTCCAGTATCAGCCGGTGCGCGTTCGAAACA
ATAAACAATTGAGAATCCCCCTCCCCCCCCCCGCCCACCCAAGACTAAAA
AATGCCTTGAGGTTTAGTCGTTTAATTTATTTAGAACGTTTTCTTGTCTG
CCTATTTTTGAAGAAAATACAGAACGCACCTGTTCTGATTTTTGGGTATG
GCAACGGATAAATGAGCCCACACGGGAGGATTCGGTACGTGTACCGCAGA
ACGCCTCGTCTCTCGTCTCGGGGGAAGCCTCCCCCCCTCCTTTCTTTTCT
CGGTGTCTTGTCTGTTTATATGTCTATGTCTGTGTGTGTGTGTGTGTGTC
TATCGGTCTACTCTCTTGAGGGCCTTTGCAGCCGAAACGCGCGCGGACAC
CGACACACAAACACGCGGTCGCGCAATTTTGCACCGTTTCCTTCTCCTTT
ACGGCGCCGCCAGGGCGGGCGCAAGAAGTTCCGGTGCGAGGCTTCCGGGT
GCGGCATGATGTTCGTCCACCGGCACTCCCTCGTGAAGCACGTCATGCGA
GAGCACAAGACCAGTCGTTCCCCCGCCGCCGCTTCCGCCGCCGCTCCTCC
AGCCGTATAAGCTGGCGGCGATTGCGACGGTGCTGGGAGGAAGGATTCTT
CGACACTGGTCCAGAGCCATACGACGACGCCGACGCCTGACAAACGTGGA
ACTCCTCCTGAGTGACCGGCTGTGAGGACCTAGCGACGCGGGTGGAGAAG
TAGGAAACATCGGGAGAACGGTCCGCGGAAGGGTTCTTCTCCCCTGAGTG
GTGACCAGCGGCCGGAAGCCCGAACCTGTGGGAAGGATACAAGTTGACAG
TAGATGTCTTTCCGGCGTGTGCGTACTACAGCGTGGACTTCTTTTCGAAA
CCGCAGCGCAGCGGTCTTTTGTTTGGGGATGGAGAGGCGACGCTTGAATG
CCGCAGAGGGGTTGTTGCGAGAAGAGTTTGCTTGAGGGGAAAACCAGCAG
ACCCCCATCGTAGTTGAGTCTGCCTTTGACGTCCTGCGCGGCAGCGAAGC
ATTCTTGTTCGTCCTGAGGCGGGGGGCGGGGGCGAGACTGTCCTGCTGGT
GACTTTTTTTGTGTGTTATCGAGAGGGCTTTCTCTGGAGCATGTCGACAG
CCATGTTGCGTGTTCCTTGGGAGGTGCGTGTGTTGTCGGGCTCCGTGCGT
GCGGTGAGAAGGTGTAGGGGTCACGTGTTTTCCGTTCTTTG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig766:251330..259320-

>mRNA_F-serratus_M_contig766.18923.1 ID=mRNA_F-serratus_M_contig766.18923.1|Name=mRNA_F-serratus_M_contig766.18923.1|organism=Fucus serratus male|type=CDS|length=1032bp|location=Sequence derived from alignment at F-serratus_M_contig766:251330..259320- (Fucus serratus male)
ATATGTACAACTACCGGCAACATCGATGTCCACAGCCGGACTGCGGCTGG
GTGTTTGACCGCGCCAGCAAGCTTGCGGCGCACGAAAAGACCCACTTGGC
GCGGTTTCGGTGCCAGTTCGAGGGCTGCGGGAAGGCCTTCGTGCTCGCCT
CCGGCCTGAACCTCCACCTCAAGGATGAACATCCTTTCCTGTACAACTAC
CGGCAACATCGATGTCCACAGCCGGACTGCGGCTGGGTGTTTGACCGCGC
CAGCAAGCTTGCGGCGCACGAAAAGACCCACTTGGCGCGGTTTCGGTGCC
AGTTCGAGGGCTGCGGGAAGGCCTTCGTGCTCGCCTCCGGCCTGAACCTC
CACCTCAAGGATGAACATCCTTTCCTGTGCTCAGTGTGCGACATGGTCTT
CGACAGAGAGGACGTGTTGCATAAGCACATGGGGACGCACCGTAGAGCAG
GCGACGGAGGCTTCGTCCGACTCTACTCGTGTAACGCGCCCGGATGCGGA
AAGGCCTTCACCGAAAAGCGAAACTTCAACGTCCACCGCCGGGCAACTCA
CACCGAGGTGCTCAGTGTGCGACATGGTCTTCGACAGAGAGGACGTGTTG
CATAAGCACATGGGGACGCACCGTAGAGCAGGCGACGGAGGCTTCGTCCG
ACTCTACTCGTGTAACGCGCCCGGATGCGGAAAGGCCTTCACCGAAAAGC
GAAACTTCAACGTCCACCGCCGGGCAACTCACACCGAGGGCGGGCGCAAG
AAGTTCCGGTGCGAGGCTTCCGGGTGCGGCATGATGTTCGTCCACCGGCA
CTCCCTCGTGAAGCACGTCATGCGAGAGCACAAGACCAGTCGTTCCCCCG
CCGCCGCTTCCGCCGCCGCTCCTCCAGCCGTATAAGGCGGGCGCAAGAAG
TTCCGGTGCGAGGCTTCCGGGTGCGGCATGATGTTCGTCCACCGGCACTC
CCTCGTGAAGCACGTCATGCGAGAGCACAAGACCAGTCGTTCCCCCGCCG
CCGCTTCCGCCGCCGCTCCTCCAGCCGTATAA
back to top