prot_F-serratus_M_contig765.18912.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig765.18912.1
Unique Nameprot_F-serratus_M_contig765.18912.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length138
Homology
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126WXS3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXS3_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 8.100e-79
Identity = 108/136 (79.41%), Postives = 120/136 (88.24%), Query Frame = 0
Query:    1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 136
            MLS PD SK +SYC+TDP+L DNPIIFCSD F+ F GY +EEVEGRNCRFLQGA+TDPGDVAKIR+AV EKREA LCLLNYKKDGSTF+NQFF+TPLFD+EG LAYFLGIQ +VKT D GQ P+NPGWVYTMGLH 
Sbjct:   32 MLSGPDHSKNISYCVTDPDLHDNPIIFCSDGFASFTGYDKEEVEGRNCRFLQGAKTDPGDVAKIRSAVSEKREACLCLLNYKKDGSTFNNQFFLTPLFDAEGTLAYFLGIQVQVKTGDKGQEPENPGWVYTMGLHA 167          
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126WVC6_9PHAE (Putative LOV domain-containing protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A126WVC6_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 9.330e-76
Identity = 102/136 (75.00%), Postives = 117/136 (86.03%), Query Frame = 0
Query:    1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 136
            M++ P+ SK VSYC+TDP+L+DNPIIFCSD F+ F GY +EEVEGRNCRFLQGA+TDPGDV KIR AV EK+EA LCLLNYKKDGSTFHNQFF+TP+FD+EG LAYFLGIQ +VKT   GQ P NPGW+YTMGLH 
Sbjct:   33 MMNGPENSKVVSYCVTDPDLEDNPIIFCSDGFADFTGYAKEEVEGRNCRFLQGAKTDPGDVTKIREAVTEKKEACLCLLNYKKDGSTFHNQFFLTPMFDAEGTLAYFLGIQVQVKTAAPGQEPANPGWIYTMGLHA 168          
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A6H5L122_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L122_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 2.420e-75
Identity = 101/136 (74.26%), Postives = 117/136 (86.03%), Query Frame = 0
Query:    1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 136
            M++ PD S+ VSYC+TDP+L+DNPIIFCSD F++F GY +EEVEGRNCRFLQGA+TDPGD AKIR A++E +EA LCLLNYKKDGSTFHNQFF+TPLFD  G LAYFLGIQ +VKT   GQ P+NPGWVYTMGLH 
Sbjct:   30 MMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDTAKIREAIKENKEACLCLLNYKKDGSTFHNQFFLTPLFDEGGTLAYFLGIQVQVKTASDGQEPENPGWVYTMGLHA 165          
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126X2E3_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E3_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 4.000e-74
Identity = 99/136 (72.79%), Postives = 119/136 (87.50%), Query Frame = 0
Query:    1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 136
            M++ P+ S+ VSYC+TDP+L+DNPIIFCSD F++F GY ++EVEGRNCRFLQGA+TDPGD+ KIR AV+EK+EA LCLLNYKKDGS FHNQFF+TPLFD+EG LAY+LGIQ +VKT   GQ P+NPGWVYTMGLH 
Sbjct:   30 MMNGPNNSRIVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKDEVEGRNCRFLQGAKTDPGDITKIREAVKEKKEACLCLLNYKKDGSIFHNQFFLTPLFDAEGKLAYYLGIQVQVKTGADGQEPENPGWVYTMGLHA 165          
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126WZ19_SARFS (Putative LOV domain-containing protein n=6 Tax=Sargassum TaxID=3015 RepID=A0A126WZ19_SARFS)

HSP 1 Score: 202 bits (514), Expect = 2.460e-64
Identity = 92/135 (68.15%), Postives = 113/135 (83.70%), Query Frame = 0
Query:    1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKT-PDAGQAPKNPGWVYTMGL 134
            ML+ PD SKT+ YC++DP+L DNPIIFCSD FS+ +GY REEVEGRNCRFLQGA+TDPGD+A+IR A++E +EA LCL+NYKKDGS F+NQF++ PLFD+ G LAYFLGIQ EV+T  D  Q PKN GW++TM L
Sbjct:   32 MLNGPDHSKTLCYCVSDPDLGDNPIIFCSDGFSELVGYTREEVEGRNCRFLQGAKTDPGDIAEIRDAIKENKEACLCLINYKKDGSAFNNQFYLVPLFDAGGQLAYFLGIQVEVETLDDEQQPPKNLGWLHTMCL 166          
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A6U0JAP0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JAP0_9STRA)

HSP 1 Score: 165 bits (418), Expect = 4.220e-49
Identity = 70/126 (55.56%), Postives = 95/126 (75.40%), Query Frame = 0
Query:   11 VSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 136
            VS+C+ DP+ +D PI+F SD F  F GY   E+EGRNCRFLQG  T+  DV KIR+A++ ++E S+ LLNYKKDG++F+N+FF++PL++ +G LAY++G+Q  VK    GQAP NPGWVY  GLH 
Sbjct:   91 VSFCLCDPDQEDCPIVFASDGFCNFTGYAVSEIEGRNCRFLQGPGTEKADVDKIRSAIKSEKEESVNLLNYKKDGTSFNNEFFLSPLYEEDGKLAYYIGVQCSVKKLGPGQAPANPGWVYAQGLHA 216          
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A835ZDN1_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN1_9STRA)

HSP 1 Score: 163 bits (413), Expect = 7.410e-49
Identity = 71/127 (55.91%), Postives = 97/127 (76.38%), Query Frame = 0
Query:   11 VSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSE-GNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 136
            + + +TDP+L+DNPI+F S+ FS++ GY + E+EGRNCRFLQG ET+P DV  IRAA+  + +A++CLLNY+KDG+ F NQFF+ PL D+  G +AY+LG+QA V+  + GQ  KN GWVY MGLH 
Sbjct:   51 ICWVVTDPDLEDNPIVFSSEGFSRYTGYAKSEIEGRNCRFLQGKETNPADVETIRAAIGAQTDANVCLLNYRKDGTAFLNQFFICPLHDAATGAVAYYLGVQAAVRQKEGGQTQKNAGWVYQMGLHA 177          
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126WWA7_9STRA (Putative LOV domain-containing protein n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A126WWA7_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.400e-46
Identity = 69/129 (53.49%), Postives = 91/129 (70.54%), Query Frame = 0
Query:    7 RSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLH 135
             +K V Y +TDP+LDDNPI+F S+ F ++ GY + E+EGRNCRFLQGA TDP D++ IR A+ ++ + ++C+ NY K+G  F NQFFM PL D    LAYFLG+Q  V     GQ  +NPGW+YTMG H
Sbjct:   71 ENKNVCYLVTDPDLDDNPIVFTSEGFCKYTGYEKNEIEGRNCRFLQGAGTDPKDISLIRDAIRKEIDVNVCIQNYCKNGKPFMNQFFMCPLRDENKKLAYFLGVQVVVPKKAPGQQQENPGWIYTMGNH 199          
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A7S4J4U8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4U8_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.770e-45
Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 0
Query:    9 KTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 136
            ++V +C+ DP+L D PIIF SD F  F GY  EE+EG+NCRFLQG ET   DV +IR A++E++E  + LLNY+KDGS+F N+FF++PL D    LAYF+G+Q  V     GQ P N GWVY+ G H 
Sbjct:   53 ESVCFCVCDPDLKDMPIIFSSDGFCDFTGYSHEEIEGKNCRFLQGTETSTEDVDRIRKAIKEQKEECVNLLNYRKDGSSFINEFFISPLLDDNEKLAYFIGVQCSVPKKGPGQMPSNAGWVYSQGNHA 180          
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A1E7EP39_9STRA (PAS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP39_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.920e-45
Identity = 70/128 (54.69%), Postives = 90/128 (70.31%), Query Frame = 0
Query:    9 KTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 136
            + VS+CI DP+  D PIIF SD F  F GY  +E+EGRNCRFLQG +T   D+  IR AV+E+ EAS+ LLNY+KDG++F NQFF+ PL  S+  L YF+G+Q  V+    GQAP N GW+Y+ GLH 
Sbjct:   58 EAVSFCICDPDQKDCPIIFASDGFCNFTGYDCQEIEGRNCRFLQGPDTKKEDIDTIRQAVKEETEASVNLLNYRKDGTSFANQFFLAPLRGSDSTLLYFIGVQCSVEKLGPGQAPSNVGWIYSQGLHA 185          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A126WXS3_9PHAE8.100e-7979.41Putative LOV domain-containing protein n=1 Tax=Des... [more]
A0A126WVC6_9PHAE9.330e-7675.00Putative LOV domain-containing protein n=2 Tax=Ect... [more]
A0A6H5L122_9PHAE2.420e-7574.26PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A126X2E3_9PHAE4.000e-7472.79Putative LOV domain-containing protein n=2 Tax=Scy... [more]
A0A126WZ19_SARFS2.460e-6468.15Putative LOV domain-containing protein n=6 Tax=Sar... [more]
A0A6U0JAP0_9STRA4.220e-4955.56Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A835ZDN1_9STRA7.410e-4955.91PAS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A126WWA7_9STRA1.400e-4653.49Putative LOV domain-containing protein n=1 Tax=Syn... [more]
A0A7S4J4U8_9STRA1.770e-4553.13Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1E7EP39_9STRA2.920e-4554.69PAS domain-containing protein n=1 Tax=Fragilariops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.20coord: 12..125
e-value: 2.6E-40
score: 139.8
NoneNo IPR availablePANTHERPTHR47429FAMILY NOT NAMEDcoord: 11..120
IPR000014PAS domainPFAMPF13426PAS_9coord: 12..111
e-value: 1.1E-19
score: 70.6
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 23..112
e-value: 2.2E-8
score: 32.3
IPR000014PAS domainPROSITEPS50112PAScoord: 22..75
score: 9.138
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 13..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig765contigF-serratus_M_contig765:179951..182797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig765.18912.1mRNA_F-serratus_M_contig765.18912.1Fucus serratus malemRNAF-serratus_M_contig765 179951..182797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig765.18912.1 ID=prot_F-serratus_M_contig765.18912.1|Name=mRNA_F-serratus_M_contig765.18912.1|organism=Fucus serratus male|type=polypeptide|length=138bp
MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRF
LQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDS
EGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf