mRNA_F-serratus_M_contig765.18912.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126WXS3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXS3_9PHAE) HSP 1 Score: 239 bits (609), Expect = 8.100e-79 Identity = 108/136 (79.41%), Postives = 120/136 (88.24%), Query Frame = 1
Query: 1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 408
MLS PD SK +SYC+TDP+L DNPIIFCSD F+ F GY +EEVEGRNCRFLQGA+TDPGDVAKIR+AV EKREA LCLLNYKKDGSTF+NQFF+TPLFD+EG LAYFLGIQ +VKT D GQ P+NPGWVYTMGLH
Sbjct: 32 MLSGPDHSKNISYCVTDPDLHDNPIIFCSDGFASFTGYDKEEVEGRNCRFLQGAKTDPGDVAKIRSAVSEKREACLCLLNYKKDGSTFNNQFFLTPLFDAEGTLAYFLGIQVQVKTGDKGQEPENPGWVYTMGLHA 167
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126WVC6_9PHAE (Putative LOV domain-containing protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A126WVC6_9PHAE) HSP 1 Score: 231 bits (589), Expect = 9.330e-76 Identity = 102/136 (75.00%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 408
M++ P+ SK VSYC+TDP+L+DNPIIFCSD F+ F GY +EEVEGRNCRFLQGA+TDPGDV KIR AV EK+EA LCLLNYKKDGSTFHNQFF+TP+FD+EG LAYFLGIQ +VKT GQ P NPGW+YTMGLH
Sbjct: 33 MMNGPENSKVVSYCVTDPDLEDNPIIFCSDGFADFTGYAKEEVEGRNCRFLQGAKTDPGDVTKIREAVTEKKEACLCLLNYKKDGSTFHNQFFLTPMFDAEGTLAYFLGIQVQVKTAAPGQEPANPGWIYTMGLHA 168
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A6H5L122_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L122_9PHAE) HSP 1 Score: 230 bits (586), Expect = 2.420e-75 Identity = 101/136 (74.26%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 408
M++ PD S+ VSYC+TDP+L+DNPIIFCSD F++F GY +EEVEGRNCRFLQGA+TDPGD AKIR A++E +EA LCLLNYKKDGSTFHNQFF+TPLFD G LAYFLGIQ +VKT GQ P+NPGWVYTMGLH
Sbjct: 30 MMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDTAKIREAIKENKEACLCLLNYKKDGSTFHNQFFLTPLFDEGGTLAYFLGIQVQVKTASDGQEPENPGWVYTMGLHA 165
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126X2E3_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E3_9PHAE) HSP 1 Score: 227 bits (578), Expect = 4.000e-74 Identity = 99/136 (72.79%), Postives = 119/136 (87.50%), Query Frame = 1
Query: 1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 408
M++ P+ S+ VSYC+TDP+L+DNPIIFCSD F++F GY ++EVEGRNCRFLQGA+TDPGD+ KIR AV+EK+EA LCLLNYKKDGS FHNQFF+TPLFD+EG LAY+LGIQ +VKT GQ P+NPGWVYTMGLH
Sbjct: 30 MMNGPNNSRIVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKDEVEGRNCRFLQGAKTDPGDITKIREAVKEKKEACLCLLNYKKDGSIFHNQFFLTPLFDAEGKLAYYLGIQVQVKTGADGQEPENPGWVYTMGLHA 165
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126WZ19_SARFS (Putative LOV domain-containing protein n=6 Tax=Sargassum TaxID=3015 RepID=A0A126WZ19_SARFS) HSP 1 Score: 202 bits (514), Expect = 2.460e-64 Identity = 92/135 (68.15%), Postives = 113/135 (83.70%), Query Frame = 1
Query: 1 MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKT-PDAGQAPKNPGWVYTMGL 402
ML+ PD SKT+ YC++DP+L DNPIIFCSD FS+ +GY REEVEGRNCRFLQGA+TDPGD+A+IR A++E +EA LCL+NYKKDGS F+NQF++ PLFD+ G LAYFLGIQ EV+T D Q PKN GW++TM L
Sbjct: 32 MLNGPDHSKTLCYCVSDPDLGDNPIIFCSDGFSELVGYTREEVEGRNCRFLQGAKTDPGDIAEIRDAIKENKEACLCLINYKKDGSAFNNQFYLVPLFDAGGQLAYFLGIQVEVETLDDEQQPPKNLGWLHTMCL 166
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A6U0JAP0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JAP0_9STRA) HSP 1 Score: 165 bits (418), Expect = 4.220e-49 Identity = 70/126 (55.56%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 31 VSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 408
VS+C+ DP+ +D PI+F SD F F GY E+EGRNCRFLQG T+ DV KIR+A++ ++E S+ LLNYKKDG++F+N+FF++PL++ +G LAY++G+Q VK GQAP NPGWVY GLH
Sbjct: 91 VSFCLCDPDQEDCPIVFASDGFCNFTGYAVSEIEGRNCRFLQGPGTEKADVDKIRSAIKSEKEESVNLLNYKKDGTSFNNEFFLSPLYEEDGKLAYYIGVQCSVKKLGPGQAPANPGWVYAQGLHA 216
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A835ZDN1_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN1_9STRA) HSP 1 Score: 163 bits (413), Expect = 7.410e-49 Identity = 71/127 (55.91%), Postives = 97/127 (76.38%), Query Frame = 1
Query: 31 VSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSE-GNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 408
+ + +TDP+L+DNPI+F S+ FS++ GY + E+EGRNCRFLQG ET+P DV IRAA+ + +A++CLLNY+KDG+ F NQFF+ PL D+ G +AY+LG+QA V+ + GQ KN GWVY MGLH
Sbjct: 51 ICWVVTDPDLEDNPIVFSSEGFSRYTGYAKSEIEGRNCRFLQGKETNPADVETIRAAIGAQTDANVCLLNYRKDGTAFLNQFFICPLHDAATGAVAYYLGVQAAVRQKEGGQTQKNAGWVYQMGLHA 177
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A126WWA7_9STRA (Putative LOV domain-containing protein n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A126WWA7_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.400e-46 Identity = 69/129 (53.49%), Postives = 91/129 (70.54%), Query Frame = 1
Query: 19 RSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLH 405
+K V Y +TDP+LDDNPI+F S+ F ++ GY + E+EGRNCRFLQGA TDP D++ IR A+ ++ + ++C+ NY K+G F NQFFM PL D LAYFLG+Q V GQ +NPGW+YTMG H
Sbjct: 71 ENKNVCYLVTDPDLDDNPIVFTSEGFCKYTGYEKNEIEGRNCRFLQGAGTDPKDISLIRDAIRKEIDVNVCIQNYCKNGKPFMNQFFMCPLRDENKKLAYFLGVQVVVPKKAPGQQQENPGWIYTMGNH 199
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A7S4J4U8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4U8_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.770e-45 Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 1
Query: 25 KTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 408
++V +C+ DP+L D PIIF SD F F GY EE+EG+NCRFLQG ET DV +IR A++E++E + LLNY+KDGS+F N+FF++PL D LAYF+G+Q V GQ P N GWVY+ G H
Sbjct: 53 ESVCFCVCDPDLKDMPIIFSSDGFCDFTGYSHEEIEGKNCRFLQGTETSTEDVDRIRKAIKEQKEECVNLLNYRKDGSSFINEFFISPLLDDNEKLAYFIGVQCSVPKKGPGQMPSNAGWVYSQGNHA 180
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Match: A0A1E7EP39_9STRA (PAS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP39_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.920e-45 Identity = 70/128 (54.69%), Postives = 90/128 (70.31%), Query Frame = 1
Query: 25 KTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFLQGAETDPGDVAKIRAAVEEKREASLCLLNYKKDGSTFHNQFFMTPLFDSEGNLAYFLGIQAEVKTPDAGQAPKNPGWVYTMGLHV 408
+ VS+CI DP+ D PIIF SD F F GY +E+EGRNCRFLQG +T D+ IR AV+E+ EAS+ LLNY+KDG++F NQFF+ PL S+ L YF+G+Q V+ GQAP N GW+Y+ GLH
Sbjct: 58 EAVSFCICDPDQKDCPIIFASDGFCNFTGYDCQEIEGRNCRFLQGPDTKKEDIDTIRQAVKEETEASVNLLNYRKDGTSFANQFFLAPLRGSDSTLLYFIGVQCSVEKLGPGQAPSNVGWIYSQGLHA 185 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig765.18912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig765.18912.1 >prot_F-serratus_M_contig765.18912.1 ID=prot_F-serratus_M_contig765.18912.1|Name=mRNA_F-serratus_M_contig765.18912.1|organism=Fucus serratus male|type=polypeptide|length=138bp MLSDPDRSKTVSYCITDPNLDDNPIIFCSDTFSQFLGYPREEVEGRNCRFback to top mRNA from alignment at F-serratus_M_contig765:179951..182797+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig765.18912.1 ID=mRNA_F-serratus_M_contig765.18912.1|Name=mRNA_F-serratus_M_contig765.18912.1|organism=Fucus serratus male|type=mRNA|length=2847bp|location=Sequence derived from alignment at F-serratus_M_contig765:179951..182797+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig765:179951..182797+ >mRNA_F-serratus_M_contig765.18912.1 ID=mRNA_F-serratus_M_contig765.18912.1|Name=mRNA_F-serratus_M_contig765.18912.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig765:179951..182797+ (Fucus serratus male)back to top |