mRNA_F-serratus_M_contig765.18907.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig765.18907.1 vs. uniprot
Match: D7FMR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR0_ECTSI) HSP 1 Score: 447 bits (1149), Expect = 2.450e-150 Identity = 263/397 (66.25%), Postives = 297/397 (74.81%), Query Frame = 3
Query: 213 MDPFDPDTIIHVLSRCEACQLGQVGTRVCVEKGHMATVASVKRSTHGNNFVDPYTEEEVDARYRLMLKPGEHLTILRTNAVIDGAVKFAPGTVFQQPPNTKSQTLLGCLKQGIPLHDFVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PVVTTKKPSVSN--------SERAAMSGLSGIPSQYFSRAEIDEAEAGEEDGALGGGASRSGKRQGTRSSTVRGQSQQGG--------AGADGPDSATQLEMLAQAEGELRRSFEAHIQFLDEAEKAKREEMAAFQRAGELALQNIDKSRQATKEDGLRQHKAFSHQRQRITRLRMQEVDQERARNQLESERREAKLKAEKEALSRACAAEAEELGNAWAMVEAAAGFSP 1352
MDPFDPD IIHVLSRCEACQ+GQVGTRVCVEKGH ATVASVKRS G+NFVDPYTEEEVDARYRLMLKPGE L I++TNAVIDGAVKFAPGTVFQQPPNTKSQTLLGC K G+PLHDFVLG XXXXXX P+VT KKP + SE+AA+ GLSG+ SQYF+RAE++E EA EE G R GKRQGTRSS+V GQS G A A G DSATQLE+L+ AEGELR +F+AH+++L E E+AKR EMAAFQRAGE ALQN+++SR+AT +DGLR HKAF +QRQRITRLRM+EVDQERARNQ+ESE+REA+LKAEKEALSRAC EA ELGNAWA+VEAAAGF+P
Sbjct: 1 MDPFDPDAIIHVLSRCEACQMGQVGTRVCVEKGHHATVASVKRSARGSNFVDPYTEEEVDARYRLMLKPGEPLHIIKTNAVIDGAVKFAPGTVFQQPPNTKSQTLLGCFKNGVPLHDFVLGGNNSGAXXXXXXAKKERELEMDDRQPKRRALSQGLNPGSAKKGPVAPMVTVKKPPTATTPTATATLSEKAAVQGLSGVTSQYFTRAELEELEAEEE------GTGRPGKRQGTRSSSVAGQSHAGNGAVWDGTPAAAQGADSATQLELLSAAEGELRVAFDAHMKYLSEVEEAKRAEMAAFQRAGEAALQNMERSRKATTDDGLRLHKAFLNQRQRITRLRMEEVDQERARNQVESEKREARLKAEKEALSRACEQEAAELGNAWAVVEAAAGFAP 391
BLAST of mRNA_F-serratus_M_contig765.18907.1 vs. uniprot
Match: A0A6H5KY16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY16_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 9.550e-9 Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 3
Query: 1221 QLESERREAKLKAEKEALSRACAAEAEELGNAWAMVEAAAGFSP 1352
Q+ESE+REA+LKAEKEALSRAC E ELGNAWA+VEAAAGF+P
Sbjct: 6 QVESEKREARLKAEKEALSRACEQEEAELGNAWAVVEAAAGFAP 49 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig765.18907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig765.18907.1 >prot_F-serratus_M_contig765.18907.1 ID=prot_F-serratus_M_contig765.18907.1|Name=mRNA_F-serratus_M_contig765.18907.1|organism=Fucus serratus male|type=polypeptide|length=436bp MDPFDPDTIIHVLSRCEACQLGQVGTRVCVEKGHMATVASVKRSTHGNNFback to top mRNA from alignment at F-serratus_M_contig765:36488..49949- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig765.18907.1 ID=mRNA_F-serratus_M_contig765.18907.1|Name=mRNA_F-serratus_M_contig765.18907.1|organism=Fucus serratus male|type=mRNA|length=13462bp|location=Sequence derived from alignment at F-serratus_M_contig765:36488..49949- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig765:36488..49949- >mRNA_F-serratus_M_contig765.18907.1 ID=mRNA_F-serratus_M_contig765.18907.1|Name=mRNA_F-serratus_M_contig765.18907.1|organism=Fucus serratus male|type=CDS|length=2616bp|location=Sequence derived from alignment at F-serratus_M_contig765:36488..49949- (Fucus serratus male)back to top |