mRNA_F-serratus_M_contig764.18904.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig764.18904.1 vs. uniprot
Match: D7FXT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT9_ECTSI) HSP 1 Score: 403 bits (1035), Expect = 2.010e-115 Identity = 350/1119 (31.28%), Postives = 501/1119 (44.77%), Query Frame = 3
Query: 1824 MAGRAIVKKGDTRGRGVRFEAYVPESSQIYELQLSVADLKRLFVSEPEKLAVGSKADMVSELIKMLYFDYDLETEEVGRPVSGGGGHLNTYHYRDREPWTCIAGRNDSEYDLHWES-NITTEVASGGISHDAKADAPQCPRPGSEGVRVTDDASATPVESGRHAEGDGTISATLDKKTISSIGGGNSEEKAKRTRRPRRGVEASVLTRGGNKCSRTKL--PDERAVWVRQRLAISRTHNLVNLCAKDRERGATGHGNSEFTIASDGSRPAPCTDDPKSYFSKGGMLQTEALLSKQNSPSAGSWSKQRH-------------------------------LDVSARGAFNDMGSGQKKGAGRSGP--NGRVPNNL---VRVTSFQVLAEEYHRAKRQAEVKAEEGVCAGLAIKTRFRDLTMGTAVRLSGVLMRLMVYEFSNQPGSLTIHLTDNRSLATFRMTVGVENITEC--HAITRARLAACTKAQRRGFIKRAISSIFAENSYDKYQTIGTTKSLLLDGNARNVILTGNGSYDGDEKKRD-YQWKNDRGVWWRAGERVDAENGGTHR----RLRYCAIRCLGRNSSTPHETEVLTAARAMPPRVRRYQLQQSCVADHRSFSRLRYQTPSSYWRQSCHLPAAGADRADAMLWRQRRGFQPTSLAADTPSRTFSTRXXXXXAEDAPESGEVVTTSGLDTIVNCKPFCRVSLRRNCGRGRRLCAGVAMVRARLGYFTFFRSNWTEAEGVFYIDWHSPHQICYPGFGYVEAHTTFTLKLFADDLERLTDYSGLITAAEKWTEPGKLQRFSSENLSETPERTLSKQGCYIFST---------------------------------------------EEEAWEAIARKVIQECYWRR-----LRSPPGESGTLPEA-ATSSSLDQEASYLEEVITSEASYP----LCTTCLSSQEGRQEL---SCDMRLALKTCIFHSIMKVPWVENPRRRPLYLSVVVSQWHEYLIVRCYDFLSGETKEAARPDSFTDAFLVKEFKTMTKEARNIQLQVLLADLVVCEVASGVATSERTEEDEDISQSSSKWGVKFVEEGAGPILLEDGSVSGYTNKVDAEMLAAAVQVR 4868
MAGR +V+ G R + EAY+P SS+ +L ++V +L+RLF EPEK+ VG K DMV EL+KMLYFDY LETEE + GG +YHY DREPWTC+ R D+++DLHWES N + G A A A G E T+ + GR G+G+ S + + G ++ + T A +R CS PDERAVW+ QRL + T N++++ + A G SDG G + + + +N+P+A + + Q L + R A + + A GP N PN RV +F V EEY +R AE E + A LAIK RFR LT+GT +++SG L+ LMVYEF +QPG+L + T+ S ATFR+++G+ + H + T Q+R IK I +NS T+ + + + + G +G+E + +ND W G V E HR R +CAIRCLGR+S+ + E+ TA+R + +QLQQ DHR L + P+ G AD + +G +S D + + A S +V +G V + R RR CGRG RLC G+A V G ++ R NW AE + ++W++P+ G VEAHTTFTL+L DL LT+ S ++ AAE+W+ + + T + G +T E EAWE +AR+++++CYW + P T P+ T+S DQ + LEE ITS+ + L Q GR + D+RLA+ TC+F ++KV + P P+YL VVVSQWH+ L+VRCYDF+ GE ++A R D D+ L+ EFK M R IQLQV+L DLVV + +T T+ W VKF E+GA I+++D Y +V+ +M AAA Q R
Sbjct: 1 MAGRVVVE-GAAYPRCLLIEAYIPASSETIQLYVAVDELERLFRDEPEKMWVGRKDDMVLELVKMLYFDYTLETEEADSTLPGGI-RFTSYHYSDREPWTCLHARRDADFDLHWESRNSGAGIGLPGAGPTAGAAATPA-NIGDERSEATEGTCVSAQTKGR-CSGEGSTSDACTSGPVHAHGTNPNDNNSIAT--------AGPASRVAGACSAAAACTPDERAVWITQRLQVRDTQNMLDI-----DVAACGE-------LSDGXXXXXXXXXXXXXXXXGAV--SGHPIKSRNTPAAATAAMQEFVAXXXXXXXXXXXXXXXXATAKTQGRSGRSTLVATVRSATSRKWQTNRDAAQTCGPRANAARPNRAKRKTRVRAFDVRIEEYKEERRHAEEAKEAKLQAWLAIKKRFRGLTLGTVIQVSGRLLTLMVYEFPDQPGNLNVIFTNPPSGATFRLSLGIGAVAAQARHVSVASSPETWTLRQKRKVIKTVIQ----KNSKLVLVEEDETRDRVPESSRPRPSHSEEGIDNGEEVDAEALSMEND--PW--NGLSVGGEGISKHRACGVRQLFCAIRCLGRDSTAAYAHELPTASRGFTRPRKAHQLQQPNPKDHRRAFSLVSSRSTHSASVGVAEPSVGVAAADHVSGSAMQGNPASSHGVDGSADDSWKELTDSEGQGATRSRDVKGRAGTYGCV-VRVRIRPRQRRECGRGHRLCGGIARVGGARGIYSLLRDNWAGAEDDYLLEWYAPNDFRPLRQGPVEAHTTFTLELLHQDLNLLTEGSDILAAAEEWSSKRDVTTTAFGGAHPTRDGAKKSTGATTATTALSDNGLVGRGEETRVLAPSSGAAQAEEHGEIKARNRDDVVPPLTESEAWERVAREILRKCYWGSNIQGGVARDPTTVATRPDYDQTTSGSDQPS--LEECITSQVTRTPPSGLMAETAVGQPGRPLTGVDTADVRLAVGTCVFRRVIKVMGLGIP---PMYLLVVVSQWHDALVVRCYDFIGGEIRQAERLDRSRDSALISEFKNMEPREREIQLQVILDDLVVFD-----STDAGTD----------AWSVKFREDGAAAIIVDDAGKDLYDAQVEEQMAAAAAQKR 1064
BLAST of mRNA_F-serratus_M_contig764.18904.1 vs. uniprot
Match: A0A6H5L4P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P3_9PHAE) HSP 1 Score: 380 bits (977), Expect = 1.670e-108 Identity = 320/1020 (31.37%), Postives = 467/1020 (45.78%), Query Frame = 3
Query: 1818 LGMAGRAIVKKGDTRGRGVRFEAYVPESSQIYELQLSVADLKRLFVSEPEKLAVGSKADMVSELIKMLYFDYDLETEEVGRPVSGGGGHLNTYHYRDREPWTCIAGRNDSEYDLHWESNIT--------TEVASGGISHDAKADAPQCPRPGSEGVRVTDDASATPVESGRHAEGDGTISATLDKKTISSIGGGNSEEKAKRTRRPRRGVEASVLTRGGNKCSRTKLPDERAVWVRQRLAISRTHNLVNL----CAKDRERGATGHGNSEFTIASD--GSRPAPCTDDPKSYFSKGGMLQTEALLSKQNSPSAGSWSKQRHLDVSARGAFNDMGSGQKKGAGRSGPNGRVPNNLVRVTSFQVLAEEYHRAKRQAEVKAEEGVCAGLAIKTRFRDLTMGTAVRLSGVLMRLMVYEFSNQPGSLTIHLTDNRSLATFRMTVGVENITEC--HAITRARLAACTKAQRRGFIKRAISS----IFAENSYDKYQTIGTTKSLLLDGNARNVILTGNGSYDGDEKKRD-YQWKNDRGVWWRAGERVDAENGGTHR----RLRYCAIRCLGRNSSTPHETEVLTAARAMPPRVRRYQLQQSCVADHRSFSRLRYQTPSSYWRQSCHLPAAGADRADAMLWRQRRGFQPTSLAADTPSRTFSTRXXXXXAEDAPESGEVVTTSGLDTI-VNCKPFCRVSLRRNCGRGRRLCAGVAMVRARLGYFTFFRSNWTEAEGVFYIDWHSPHQICYPGFGYVEAHTTFTLKLFADDLERLTDYSGLITAAEKWTEPGKLQ----------RFSSENLS-------------------ETPERTLS----------------KQGCYIFSTEEEAWEAIARKVIQECYWRR-----LRSPPGESGTLPEA-ATSSSLDQEASYLEEVITSEASYP----LCTTCLSSQEGRQEL---SCDMRLALKTCIFHSIMKVPWVENPRRRPLYLSVVVSQWHEYLIVRCYDFLSGETKEAARPDSFTDAFLVKEFKTMT 4625
+GMAGR +V+ G R V EAY+P SS+ +L +SV +L+RLF + EKL VG K DMV EL+KMLYFDY LETEE + G +YHY DREPWTC+ DS++DLHWES T E +G + AK Q G+EG V+ ++ G+G+ S I + G +++ K+ T P R V + R C+ P ERAVW+ QRL + T N++++ C + + ++A+ P + P + + G L + +S ++ W +R D + A +GPN RV +F V EEY +R AE E + A LA+K RFR LT+GT +++SG L+ LMVYEF +QPG+L + T S ATFR+++G+ + H + T Q+R IK+ I + + E + + + + T Y+G+E + + +ND W G V + HR R +CAIRCLGR+S+ + + TA+R +QLQQ DHR L + P+ G D + +G +S D + +E A S +V T +T + RR CGRGRRLC G+A VR G ++ R NW AE + +DW+ P+ G +E HT FTLKL A DL LT+ S + AAE+W+ + R + N + ET + LS + G TE EAWE +AR+++++CYW + P T P+ T+S DQ + LEE ITS+A+ L T Q GR + D+RL + TC+F ++KV + P P+YL VVVSQWH+ L+VRCYDF+ GE ++A R D D+ L+ EFK ++
Sbjct: 1 MGMAGRVVVE-GAAYPRCVLIEAYIPASSETIQLYVSVDELERLFRDDSEKLWVGRKEDMVLELVKMLYFDYTLETEEADSTLPDGI-RFTSYHYSDREPWTCLHALRDSDFDLHWESRNTGAGPGFPGAEPTAGAAATPAKIGDEQSE--GTEGTCVS-------AQTRGGYRGEGSPSDACTSGPIHAHGTSSNDSKSIATAGPARRVAGAC--RAAAACT----PAERAVWITQRLQVRNTQNMLDVDVAACGELSDGXXXXXXXXXXSVAAGTVSGHPIKSRNGPGATAATQGRSGRSTLDATVHSVASRKWHSKR-----------DAAQTRGHRANAAGPN--RAKRKTRVRAFDVRIEEYKEERRHAEEAKEAKLQAWLAVKKRFRGLTLGTVIQVSGRLLTLMVYEFPDQPGNLNVVFTTPPSGATFRLSLGIGAVAAQARHVSVASSTDTWTLRQKRKVIKKVIQNNSKLVLVEEDETRDRAPERRDNRFRAFSDVRPFETSRRDYNGEEVDAEAFSMEND--PW--NGLSVGGDGISKHRACGVRQVFCAIRCLGRDSTAAYARALPTASRGFTRPCNAHQLQQPSPKDHRRTFSLMSSRSTHTALVGVAEPSVGVAVGDQVSGTAMQGNPASSHGVDGSADNSWKDLTDDESEGATRSRDV--TERAETYGCGVRVXXXXXXRRECGRGRRLCGGIARVRGARGIYSLLRGNWAGAEDDYLLDWYQPNDFRPLRQGPIETHTAFTLKLLAQDLNLLTEGSDVFPAAEEWSSKRDVATTTFGGAPPTRDGANNSTGATTATTALSDNGLVGRGEETRKLALSPGAAQAEEHGEPKARNRDGAVPPLTESEAWERVAREILRKCYWGSDVQGGVAGDPTIVATRPDYDQTTSGQDQPS--LEECITSQATRTPPSGLMTETAMGQPGRPLAGVHTADVRLVVGTCVFRRVIKVMGLGIP---PMYLLVVVSQWHDALVVRCYDFIGGEIRQAERLDRSRDSALISEFKVIS 979
BLAST of mRNA_F-serratus_M_contig764.18904.1 vs. uniprot
Match: D7FXT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT8_ECTSI) HSP 1 Score: 110 bits (274), Expect = 1.350e-23 Identity = 61/127 (48.03%), Postives = 78/127 (61.42%), Query Frame = 3
Query: 1263 GSPLGLTVETVGRLGVVFDRAGRLRVVEQHMLAFDEVWPVDLPALHPFQLLLMRPC-----------TKDDRR------------GPVYLMPMHRRGKAVEARETELFWEPPMLRRDKGESASKMDR 1574
G+ +GLT E + R VV DR+GR+ +VE+H+LAFDEVWP DLPAL P QL L R C + ++ R GPV+LMPMHR+GK V+ RE ELF EPP LRRD+ E+ +R
Sbjct: 61 GAVVGLTAEALARPAVVLDRSGRVILVEKHLLAFDEVWPADLPALRPLQLNLRRSCGAGRANGDVGHSDNNARKGEGQSGGGRFGGPVFLMPMHRKGKGVQGREDELFAEPPRLRRDEEETTMNRNR 187
BLAST of mRNA_F-serratus_M_contig764.18904.1 vs. uniprot
Match: A0A2R5GDM4_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDM4_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.020e-8 Identity = 76/288 (26.39%), Postives = 126/288 (43.75%), Query Frame = 3
Query: 1203 IKPKTETARSCDAVRLNRFGGSPLGLTVETVGRLGVVFDRAGRLRVVEQHMLA----FDEVWPVDLPALHPFQLLLMRPCTKDDRRGPVYLMPMHRRGKAVEARETELFWEPPMLRRDKG---ESASKMDRFCFNDERRYGIQLQ--KWSREAKNTSNAAVRGRRRPRYKLSTTGTHTELWMWSSDAQIMVGTLALWRGAMLISRTHTVLSVYGLGMAGRAIVKKGDTRGRGVRFEAYVPESSQIYELQLSVADLKRLFVSEPEKLAVGSKADMVSELIKMLYFDYDL 2039
IK +T + L R L + V R V D G++RV+++ + FDE++ + P ++ LMR R +MP G ++ + + + P+ RD+ E + + ++R + K EA +SNA V +D ++ L L +GA+L ++ VLSVYG+G+AGR +K R VR EAY P + Q Y L+++++DL+ LF P L VG K + L+ M+Y D ++
Sbjct: 76 IKKRTPRVQRTGPGNLGRIVRGLPRLHADVVTRHCAVLDELGQVRVLQEARVELRERFDEIF------ISPLRMYLMRASDAYQERP---MMPCANNGFLLDNFDHKHGYREPIRNRDRNWWEEMWTDLAPSLVPYKKRRAAEAAEAKALEEANTSSNAKV----------------------YADGVLLSKLLLLRQGAVLGTQAM-VLSVYGMGIAGRIYIKPARFP-RHVRIEAYCPRTRQTYSLRVNLSDLEELFADRPHLLEVGHKKSLCRALLDMVYMDEEV 330 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig764.18904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig764.18904.1 >prot_F-serratus_M_contig764.18904.1 ID=prot_F-serratus_M_contig764.18904.1|Name=mRNA_F-serratus_M_contig764.18904.1|organism=Fucus serratus male|type=polypeptide|length=1614bp MLSQEVAWPLTPENGACSEQNLDGRTLNTDSSAYSGERCRHPLQAFLTTAback to top mRNA from alignment at F-serratus_M_contig764:259498..285802- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig764.18904.1 ID=mRNA_F-serratus_M_contig764.18904.1|Name=mRNA_F-serratus_M_contig764.18904.1|organism=Fucus serratus male|type=mRNA|length=26305bp|location=Sequence derived from alignment at F-serratus_M_contig764:259498..285802- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig764:259498..285802- >mRNA_F-serratus_M_contig764.18904.1 ID=mRNA_F-serratus_M_contig764.18904.1|Name=mRNA_F-serratus_M_contig764.18904.1|organism=Fucus serratus male|type=CDS|length=9684bp|location=Sequence derived from alignment at F-serratus_M_contig764:259498..285802- (Fucus serratus male)back to top |