mRNA_F-serratus_M_contig7630.18898.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_F-serratus_M_contig7630.18898.1
Unique Name	mRNA_F-serratus_M_contig7630.18898.1
Type	mRNA
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))

Homology

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: D8LMP7_ECTSI (Component of SCAR regulatory complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP7_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 7.110e-43
Identity = 75/110 (68.18%), Postives = 93/110 (84.55%), Query Frame = 2

Query:    5 WFPPKNVSLTLSLPEDVKLKKYVKGLAKEAGANSSVKRRERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQHASQGSAKRPSRGI-DPVQCDPMV 331
            WFPPKN +LTLSLP DVKLKKY+KG+ KEA A  ++K RERRAY+REQVK L++LVG EPGMLGPKLPMVLAAC+LAK E+VWY QH++QGS KR  +G+ +P+  DP++
Sbjct:   95 WFPPKNSTLTLSLPPDVKLKKYMKGIGKEAAATCALKHRERRAYLREQVKALAALVGSEPGMLGPKLPMVLAACKLAKQEIVWYCQHSAQGSGKRQGKGLPEPILLDPVI 204

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: A0A0L0DEM9_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DEM9_THETB)

HSP 1 Score: 62.0 bits (149), Expect = 7.390e-9
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 2

Query:   56 KLKKYVKGLAKEAGANSSVKRRERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQH 265
            K KK+V   +      +    RERR ++R+ +  L S+   EPG+LGPKLPMVLAAC LA DE+ +Y  H
Sbjct:  312 KQKKFVVETSTTFTQTAGATHRERRQWLRQALASLYSMCAGEPGLLGPKLPMVLAACALATDEIKFYVHH 381

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: D2VRF9_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VRF9_NAEGR)

HSP 1 Score: 58.9 bits (141), Expect = 8.900e-8
Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 2

Query:   56 KLKKYVKGLAKEAGANSSVKRRERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQH 265
            K KK +K LA+ A        +E R Y+R Q+K L +++  +PG+LGPK  +VLAA  +A++E++WYF H
Sbjct:  337 KEKKSLKELAEIAAEKCHDYHKELRNYLRLQLKSLLNMMKDQPGLLGPKFNLVLAAISMARNEIMWYFHH 406

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: A0A818M3N9_9BILA (Hypothetical protein n=18 Tax=Bdelloidea TaxID=44578 RepID=A0A818M3N9_9BILA)

HSP 1 Score: 57.8 bits (138), Expect = 2.260e-7
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 2

Query:   53 VKLKKYVKGLAKEAGANSSVKRRERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQHASQGSAK 286
            +KL + +    K+A  +  + RRERR Y+R Q+K LS +   +P +LGPKL     A  LA+DE+VW  +H+    AK
Sbjct:  315 LKLTELLNDTFKKAITDQPLYRRERRKYIRPQLKELSLVFADQPALLGPKLLTAFTALSLARDEIVWLLRHSENFPAK 392

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: A0A815H9H7_9BILA (Hypothetical protein (Fragment) n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815H9H7_9BILA)

HSP 1 Score: 56.2 bits (134), Expect = 6.760e-7
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 2

Query:   32 TLSLPEDVKLKKYVKGLAKEAGANSSVKRRERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQHASQGSAK 286
            TL     +KL + +    K+A     + RRERR Y+R Q+K L+ +   +P +LGPKL     A  LA+DE+VW  +H+     K
Sbjct:  169 TLISYRQLKLTELLNDTFKKAMTEQPLYRRERRKYIRPQLKELALIFADQPALLGPKLLTAFTALSLARDEIVWLLRHSENFPTK 253

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: UPI0009E4920B (nck-associated protein 1 homolog n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4920B)

HSP 1 Score: 56.2 bits (134), Expect = 7.830e-7
Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 2

Query:   65 KYVKGLAKEAGANSSVKRRERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQHASQGSAK 286
            K ++  A +A A      +ERR Y+R  +K +S ++  +PG+LGPK+ +VL A  +AKDE++W  +HA     K
Sbjct:  318 KDIQDAATQAIATRGPVHKERRNYLRTALKEMSLILSDQPGLLGPKILVVLEALSMAKDEIMWLVRHACNSPPK 391

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: A0A815X2U3_9BILA (Hypothetical protein (Fragment) n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815X2U3_9BILA)

HSP 1 Score: 55.5 bits (132), Expect = 1.410e-6
Identity = 29/78 (37.18%), Postives = 44/78 (56.41%), Query Frame = 2

Query:   53 VKLKKYVKGLAKEAGANSSVKRRERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQHASQGSAK 286
            +KL + +    K+A     + RRERR Y+R Q+K L+ +   +P +LGPKL     A  LA+DE+VW  +H+     K
Sbjct:  315 LKLTELLNDTFKKAMTEQPLYRRERRKYIRPQLKELALIFADQPALLGPKLLTAFTALSLARDEIVWLLRHSENFPTK 392

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: A0A813TNQ5_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A813TNQ5_ADIRI)

HSP 1 Score: 55.5 bits (132), Expect = 1.490e-6
Identity = 29/78 (37.18%), Postives = 45/78 (57.69%), Query Frame = 2

Query:   53 VKLKKYVKGLAKEAGANSSVKRRERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQHASQGSAK 286
            +KL + +    K A  +  + RRERR Y+R Q+K L+ +   +P +LGPKL     A  LA+DE+VW  +H+    +K
Sbjct:  315 LKLTELLNETFKRAMTDQPLYRRERRKYIRPQLKELALIFADQPALLGPKLLTAFTALSLARDEIVWLLRHSENFPSK 392

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: A0A6A5BM77_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BM77_NAEFO)

HSP 1 Score: 54.7 bits (130), Expect = 2.720e-6
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = 2

Query:  119 RERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQH 265
            +E R Y+R Q+K L +++  +PG+LGPK  +VLAA  +A+ E++WYF H
Sbjct:  358 KELRNYLRLQLKSLLNMMKDQPGLLGPKFNLVLAAISMARSEIMWYFHH 406

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BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Match: UPI00077AD979 (LOW QUALITY PROTEIN: nck-associated protein 1 homolog n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AD979)

HSP 1 Score: 53.9 bits (128), Expect = 5.060e-6
Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 2

Query:  119 RERRAYMREQVKGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQHA 268
            RERR Y+R  +K +S ++  +PG+LGPK+ +VL A  +A+DE++W  +HA
Sbjct:  336 RERRNYLRTALKEMSLILSDQPGLLGPKILVVLQALSMARDEVLWLIRHA 385

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig7630.18898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 15


Match Name	E-value	Identity	Description
D8LMP7_ECTSI	7.110e-43	68.18	Component of SCAR regulatory complex n=1 Tax=Ectoc...	[more]
A0A0L0DEM9_THETB	7.390e-9	45.71	Uncharacterized protein n=1 Tax=Thecamonas trahens...	[more]
D2VRF9_NAEGR	8.900e-8	42.86	Predicted protein n=1 Tax=Naegleria gruberi TaxID=...	[more]
A0A818M3N9_9BILA	2.260e-7	39.74	Hypothetical protein n=18 Tax=Bdelloidea TaxID=445...	[more]
A0A815H9H7_9BILA	6.760e-7	36.47	Hypothetical protein (Fragment) n=1 Tax=Adineta st...	[more]
UPI0009E4920B	7.830e-7	37.84	nck-associated protein 1 homolog n=1 Tax=Orbicella...	[more]
A0A815X2U3_9BILA	1.410e-6	37.18	Hypothetical protein (Fragment) n=1 Tax=Adineta st...	[more]
A0A813TNQ5_ADIRI	1.490e-6	37.18	Hypothetical protein n=3 Tax=Adineta ricciae TaxID...	[more]
A0A6A5BM77_NAEFO	2.720e-6	46.94	Uncharacterized protein n=2 Tax=Naegleria TaxID=57...	[more]
UPI00077AD979	5.060e-6	46.00	LOW QUALITY PROTEIN: nck-associated protein 1 homo...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig7630	contig	F-serratus_M_contig7630:4356..8460 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-19
OGS1.0 of Fucus serratus male	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	159.1
Seed ortholog evalue	1.2e-36
Seed eggNOG ortholog	2880.D8LMP7
Preferred name	NCKAP1L
KEGG ko	ko:K05750
KEGG Pathway	ko04810,map04810
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000578,GO:0000768,GO:0000902,GO:0000904,GO:0001667,GO:0001701,GO:0001726,GO:0001756,GO:0001764,GO:0001775,GO:0001776,GO:0001782,GO:0001817,GO:0001818,GO:0001838,GO:0001841,GO:0001843,GO:0001932,GO:0001934,GO:0002009,GO:0002252,GO:0002253,GO:0002260,GO:0002262,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0002694,GO:0002696,GO:0002757,GO:0002764,GO:0002768,GO:0003002,GO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005884,GO:0005886,GO:0005887,GO:0005911,GO:0006355,GO:0006810,GO:0006887,GO:0006897,GO:0006909,GO:0006915,GO:0006928,GO:0006935,GO:0006949,GO:0006950,GO:0006955,GO:0006970,GO:0006972,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007264,GO:0007265,GO:0007267,GO:0007275,GO:0007350,GO:0007351,GO:0007354,GO:0007369,GO:0007389,GO:0007399,GO:0007409,GO:0007417,GO:0007423,GO:0007439,GO:0007440,GO:0007492,GO:0007498,GO:0007507,GO:0007520,GO:0007528,GO:0007610,GO:0008047,GO:0008064,GO:0008078,GO:0008104,GO:0008150,GO:0008219,GO:0008284,GO:0008360,GO:0008407,GO:0008595,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009798,GO:0009825,GO:0009880,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009948,GO:0009952,GO:0009987,GO:0010026,GO:0010090,GO:0010171,GO:0010172,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010591,GO:0010592,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010921,GO:0010923,GO:0010941,GO:0012501,GO:0012505,GO:0012506,GO:0014020,GO:0014902,GO:0015629,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016192,GO:0016331,GO:0016477,GO:0016601,GO:0018991,GO:0019098,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019887,GO:0021915,GO:0022008,GO:0022407,GO:0022409,GO:0022414,GO:0022416,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0023052,GO:0030011,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030032,GO:0030036,GO:0030054,GO:0030097,GO:0030099,GO:0030100,GO:0030141,GO:0030154,GO:0030155,GO:0030175,GO:0030182,GO:0030218,GO:0030234,GO:0030295,GO:0030334,GO:0030335,GO:0030593,GO:0030595,GO:0030659,GO:0030667,GO:0030695,GO:0030832,GO:0030833,GO:0030838,GO:0030865,GO:0030866,GO:0030888,GO:0030890,GO:0030903,GO:0030950,GO:0030952,GO:0031090,GO:0031143,GO:0031175,GO:0031209,GO:0031224,GO:0031226,GO:0031252,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031344,GO:0031346,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031589,GO:0031647,GO:0031941,GO:0031982,GO:0031984,GO:0032101,GO:0032103,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032433,GO:0032501,GO:0032502,GO:0032504,GO:0032515,GO:0032535,GO:0032660,GO:0032675,GO:0032700,GO:0032715,GO:0032879,GO:0032880,GO:0032940,GO:0032944,GO:0032946,GO:0032956,GO:0032970,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033627,GO:0033628,GO:0033630,GO:0033674,GO:0034101,GO:0034315,GO:0035050,GO:0035148,GO:0035239,GO:0035282,GO:0035295,GO:0035303,GO:0035304,GO:0035305,GO:0035308,GO:0035507,GO:0035509,GO:0035556,GO:0036230,GO:0038093,GO:0038094,GO:0038096,GO:0040007,GO:0040011,GO:0040012,GO:0040017,GO:0042074,GO:0042102,GO:0042119,GO:0042127,GO:0042129,GO:0042175,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042331,GO:0042493,GO:0042592,GO:0042692,GO:0042981,GO:0042995,GO:0043009,GO:0043029,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043087,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043299,GO:0043312,GO:0043370,GO:0043372,GO:0043376,GO:0043378,GO:0043547,GO:0043549,GO:0043666,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045010,GO:0045055,GO:0045175,GO:0045176,GO:0045321,GO:0045577,GO:0045579,GO:0045580,GO:0045582,GO:0045586,GO:0045588,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045637,GO:0045639,GO:0045646,GO:0045648,GO:0045785,GO:0045807,GO:0045859,GO:0045860,GO:0045893,GO:0045935,GO:0045936,GO:0045937,GO:0046634,GO:0046635,GO:0046637,GO:0046638,GO:0046643,GO:0046645,GO:0046662,GO:0046903,GO:0046956,GO:0048010,GO:0048259,GO:0048260,GO:0048332,GO:0048339,GO:0048340,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048520,GO:0048522,GO:0048523,GO:0048534,GO:0048546,GO:0048557,GO:0048562,GO:0048565,GO:0048566,GO:0048567,GO:0048568,GO:0048570,GO:0048583,GO:0048584,GO:0048588,GO:0048589,GO:0048598,GO:0048609,GO:0048611,GO:0048613,GO:0048617,GO:0048646,GO:0048666,GO:0048667,GO:0048668,GO:0048699,GO:0048729,GO:0048731,GO:0048812,GO:0048821,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048872,GO:0050670,GO:0050671,GO:0050764,GO:0050766,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050808,GO:0050821,GO:0050851,GO:0050853,GO:0050863,GO:0050864,GO:0050865,GO:0050867,GO:0050870,GO:0050871,GO:0050896,GO:0050900,GO:0050920,GO:0050921,GO:0051049,GO:0051050,GO:0051094,GO:0051125,GO:0051127,GO:0051128,GO:0051130,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051254,GO:0051270,GO:0051272,GO:0051336,GO:0051338,GO:0051345,GO:0051346,GO:0051347,GO:0051493,GO:0051495,GO:0051674,GO:0051716,GO:0052128,GO:0055123,GO:0060099,GO:0060100,GO:0060255,GO:0060326,GO:0060429,GO:0060485,GO:0060491,GO:0060548,GO:0060560,GO:0060562,GO:0060589,GO:0060606,GO:0060627,GO:0061053,GO:0061061,GO:0061515,GO:0061564,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070358,GO:0070663,GO:0070665,GO:0070820,GO:0070887,GO:0071621,GO:0071622,GO:0071624,GO:0071840,GO:0071944,GO:0072132,GO:0072175,GO:0072359,GO:0080090,GO:0090022,GO:0090023,GO:0090066,GO:0090558,GO:0090626,GO:0097435,GO:0097529,GO:0097530,GO:0097581,GO:0097708,GO:0098588,GO:0098609,GO:0098657,GO:0098772,GO:0098805,GO:0098827,GO:0098858,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0101003,GO:0110053,GO:0110094,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:1901046,GO:1902105,GO:1902107,GO:1902473,GO:1902474,GO:1902622,GO:1902624,GO:1902680,GO:1902743,GO:1902745,GO:1902903,GO:1902905,GO:1903037,GO:1903039,GO:1903506,GO:1903508,GO:1903706,GO:1903708,GO:1905153,GO:1905155,GO:1990266,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000241,GO:2000243,GO:2000369,GO:2000370,GO:2000514,GO:2000516,GO:2000601,GO:2001141,GO:2001185,GO:2001187
EggNOG free text desc.	positive regulation of actin filament polymerization
EggNOG OGs	KOG1917@1,KOG1917@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001
Exons	4
Model size	337
Cds size	336
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig7630.18898.1	prot_F-serratus_M_contig7630.18898.1	Fucus serratus male	polypeptide	F-serratus_M_contig7630 4356..8459 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622932293.0255656-CDS-F-serratus_M_contig7630:4355..4412	1622932293.0255656-CDS-F-serratus_M_contig7630:4355..4412	Fucus serratus male	CDS	F-serratus_M_contig7630 4356..4412 -
1690964238.5308802-CDS-F-serratus_M_contig7630:4355..4412	1690964238.5308802-CDS-F-serratus_M_contig7630:4355..4412	Fucus serratus male	CDS	F-serratus_M_contig7630 4356..4412 -
1622932293.0453546-CDS-F-serratus_M_contig7630:4987..5056	1622932293.0453546-CDS-F-serratus_M_contig7630:4987..5056	Fucus serratus male	CDS	F-serratus_M_contig7630 4988..5056 -
1690964238.5478568-CDS-F-serratus_M_contig7630:4987..5056	1690964238.5478568-CDS-F-serratus_M_contig7630:4987..5056	Fucus serratus male	CDS	F-serratus_M_contig7630 4988..5056 -
1622932293.0647662-CDS-F-serratus_M_contig7630:7355..7531	1622932293.0647662-CDS-F-serratus_M_contig7630:7355..7531	Fucus serratus male	CDS	F-serratus_M_contig7630 7356..7531 -
1690964238.5580454-CDS-F-serratus_M_contig7630:7355..7531	1690964238.5580454-CDS-F-serratus_M_contig7630:7355..7531	Fucus serratus male	CDS	F-serratus_M_contig7630 7356..7531 -
1622932293.0981398-CDS-F-serratus_M_contig7630:8425..8459	1622932293.0981398-CDS-F-serratus_M_contig7630:8425..8459	Fucus serratus male	CDS	F-serratus_M_contig7630 8426..8459 -
1690964238.5682085-CDS-F-serratus_M_contig7630:8425..8459	1690964238.5682085-CDS-F-serratus_M_contig7630:8425..8459	Fucus serratus male	CDS	F-serratus_M_contig7630 8426..8459 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622932293.1119714-UTR-F-serratus_M_contig7630:8459..8460	1622932293.1119714-UTR-F-serratus_M_contig7630:8459..8460	Fucus serratus male	UTR	F-serratus_M_contig7630 8460..8460 -
1690964238.5794344-UTR-F-serratus_M_contig7630:8459..8460	1690964238.5794344-UTR-F-serratus_M_contig7630:8459..8460	Fucus serratus male	UTR	F-serratus_M_contig7630 8460..8460 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at F-serratus_M_contig7630:4356..8460-
coding sequence from alignment at F-serratus_M_contig7630:4356..8460-

protein sequence of mRNA_F-serratus_M_contig7630.18898.1

>prot_F-serratus_M_contig7630.18898.1 ID=prot_F-serratus_M_contig7630.18898.1|Name=mRNA_F-serratus_M_contig7630.18898.1|organism=Fucus serratus male|type=polypeptide|length=112bp
MWFPPKNVSLTLSLPEDVKLKKYVKGLAKEAGANSSVKRRERRAYMREQV
KGLSSLVGVEPGMLGPKLPMVLAACRLAKDELVWYFQHASQGSAKRPSRG
IDPVQCDPMVPM

mRNA from alignment at F-serratus_M_contig7630:4356..8460-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_F-serratus_M_contig7630.18898.1 ID=mRNA_F-serratus_M_contig7630.18898.1|Name=mRNA_F-serratus_M_contig7630.18898.1|organism=Fucus serratus male|type=mRNA|length=4105bp|location=Sequence derived from alignment at F-serratus_M_contig7630:4356..8460- (Fucus serratus male)
GATGTGGTTCCCCCCGAAGAACGTATCCCTCACACGTGAGTGGAAACCCC
GTTGCAATGAAATGACTCCAGAGATCTACGTTTTAACAGCATCGTATAGC
CTAGTGTTTGCAACGTAATGCCTGGAAAGAAAGCTCGAGGAGACGTACAT
CACGCTGTGTCTATGATATTCTCTCGTTTTGTTAAGGAAATGTTAGGTCC
TCAGGTTATGTAGGTATAACTTTACTGCTCTACTTTCTTTTTTGTCCAAC
AAATAGCATTGAAAAACAATAAGATGAAATCGAAGCGTTTTGGGAGGGGA
AAAAAAAAGTAAGGGGGAAAAAAAAGTAAGGGGAAAAAAAAAAGCGAGCA
AGCTTGGCCAACATTTGAAAACCTCCGACCGGAAAGAAGAAAAAAGTGCA
GCCCGATATAGTTCTTCCTGTAACAAAATACCATGTACATATTATAGGTA
CCAGGTATATATTTATATTCAAAGAAAAATATGAACTCACCTAGATTTTC
TGAGCATCCCCCAGTCAGGAGGGGGAAATGTCTAAACGTTTAGGTGGGAT
CATAGGCTGAAAATACAAAACCTCTTCATGGCATTTAATCGGGTTCCCAA
TTGGTAGTAACATTGGGTCGACAGTATAATGTCGGGGAGAAGCCCACCGT
TACGTTATACACTTAGATTTTAATCGCCATGCAGGGACACAAAACAACAC
AAAGATAAAGAGACGTGACGAGCCTGGATTACAGCTCAGTTTGTAACATT
GAGTCTGGGTCCGTGTGGGCGTCGTTGAAGGAAATCTACTACTAATAGGG
TGAATAGCAATAAACACGAGCAAGACCCAACAAAACCTCTTTCCTCCCGG
CAACACAAAACCCAAGCCCGCCGCCTTCCCCTCCCCCGCCCCCTCCAACA
AATCACGCCTACGCACCCCCCTACACCAGTATCCTTGCCGGAGGACGTGA
AGCTAAAGAAGTACGTGAAGGGTCTCGCCAAGGAAGCCGGGGCGAACAGC
TCCGTGAAGCGGCGAGAGCGCAGAGCATACATGAGGGAGCAGGTCAAAGG
ACTGAGTTCGTTGGTAGGAGTGGAACCCGGGATGCTCGGCCCCAAGCTCC
CCATGGTGAGACATTTATAGAGGTGTTGTAGAGTAGACGGAAGGGGACAG
GGGGGGGGGGGGGGGGGCAGGGGAGAATTGTGTTTGAACATGACCGTACA
AGAGCTTAGTCTGTAAAAGCGTCGGGAAATCGCGCGCGCATACAGGATAC
ATTACATGGAAAAAGAGGACGGGTTGGCAGAGGGTATTAAAAGAAAAATC
TGAACGCATCCAGACCTTCTGGGCAACACCCCCAGTCATTCTTGTTTTGG
TTTTTGAATATTATGAGCTTTCTTGTTTCGGGTGAAAGGGGTGCGGGGGT
TCATCAGCTTCCCAGGTGACGGGAAATCAATCTAAACTTCTGCTCGTGGT
GTGATGTTGCTCATCCTGTGACGATGGCATCGTACCTGGTAGTATTTGTT
TTTGAGCGAACACGCCTCCTCGGGAGGGAAGAGGAGGAATCCTCCGACAA
ATTCGTCCGTTTTTGTCTTGGTTTTAGAGTGTGTGGTGGTGGTAACATCT
CCGAGGCTACCATTTACTGACGAGGGGCAAAAATAAATATATGCAATTTT
GTATGTGTGGGGATTTGGTAGAGAGAGGAGCGGAGATGGGGAGGGAGAAT
CCTCGGAAAAATATGTTTCAGACGTGCTTGACAAACGACGGGGTTGAACA
CTTCTTGGATCCTTTTGATATCTAGAAAGTTGACCCGATCCCTTGTTGTA
AAAGTAAAAAACATACTAACACTCGAGGTTTCCTTTTATGGAAGGAGGAA
CAGGGGGGGGAGGGGGGCTGATATAGTTTTTTTGTTTGTCCTTCTCTCCT
CTCCCTAAAATCGGTGATGGTGTATGGACATCACATGGAGCAGACGAAGT
ATGGATCAACCGGGTAAGGCTTGCCAATCCTGCTCGTGGTCAGCTGAACA
GGCGAAAATGAACATCTCCCTGTCCTCGTTCGAGCCTGAGAATTTGGTCT
CGCGAGACGGGTTCGGCCGTCCCGTCCCGCGTCATCAATCTGCTCGTTCC
CTACACTTACTCTGAATCTGGTATGATATCTGTATGGTCATCACACATAG
TAGAGTATGGATCAACCGGGTAAGGTTTCCAATCCTGCTCGTGGTCAGCT
AAACAGGGAAAATGGAAATTTCCATGTCCCCGTGCGTGCCTGAGAATTTG
GTCTCGCGAGACGGGTTCGGCCGTCCCGTCCCGCGTCATCAATCTGCTCG
TTCCCTACACTTACTCTGAATCTGGTATGATATCTGTATGGTCATCACAC
ATAGTAGAGTATGGATCAACCGGGTAAGGTTGCCAACCCTGCTCGTGGTC
AGCTAAACAGGGAAAATGGAAATTTCCATGTCCCCGTGCGTGCCTGAGAA
TTTGGTCTCGCGAGACGGGTTCCGCCGTCCCGTCCTGCGTGAGCCTGCTA
ATCTCCATACTCAGACTGAATCTGGTGCTTACTTACGGGATTCCTCCCGA
GTTCCGCGGCGGCGTCCATTTATTTATTTAAAACCGTCATACGCCATCGG
GTCAGTCCCGAGTTTATCGGATCACGCAATTGCGTACCGATGGCGTTCAC
TGCCGAGAGTCCGCCAGCACGCGGCCAGTAAACCTCAAGGTAGTTCCGAA
CGAGTGCTGCCTTGGCAGGTCACCATGGACCAACTAACATGCGCCTCTCT
TTCCCACACCCACTATTGGTATGGAGCGGGCATGTTGAAAGTACCGGCGG
TTACACACTATTCGACTACCGTGCATTGCATCCTATGTAATTGGGCGGTA
GCGAGACGATTGGAAAATGATAAAAGAAGAGACAATTTTCGAAGAAAAAC
GTCCCATGAAAAACGGTTTTCTTGCTTTTACTTTAGTAACAGTTTGATAA
AGTTTTCCACATCAATCTTTTACAGCACATTTGTGTATACATTAGAAATA
TACCACTACATGACTTATTTTGTCTGTCGAGGAAAGTTCATTTTTCGATA
AAGCAATAAAGTCGGAAAATTGGCTGTTACAATTCCTGATTTTTGCCCAC
TTGAGAAATATTTCCGGTTATAAGCATATGATAGCCTCTCCGCCCCACGC
AAAAGTGGGACCTATGATCTGTCCGAGGACACTTTTTTATTTATTTTTTT
TGCGATCAAAAAGTATAAGAAGTCGCAAAAATTATTATTATTATTTTTAT
TTTCTCGTTTTTTTGCGTTCTCCAAGGTGGACGGCTGTACGAGTCACTCT
GTTGCTATCACGTCATGACGCCTCCGCACTGAGGGACATGTGATGTGACT
ATTAATTAAAAAATCCGCTGATTACGGTATCTCTTATGTTCCGTTCCGCC
CCAGGTGCTTGCGGCGTGCAGGCTCGCCAAGGATGAGCTGGTGTGGTACT
TCCAGCACGCCTCCCAGGGATCGGTGAGACCCCTACCCTGCCCATCCCCT
CTCGACGAGACGCTGCGGCTTTTCATTTTCACGAAGTGGTAACGGTCTCG
AGTACCCGGGGTACGATTTCTAAAAAACTGGGTTTTCAAGTTTCAAGTGA
AGAGTGTTGAGAGTTCGAGGCAAACAGAGAGCCTTTGGATGGCGGATAAG
GTCGCCTCATCTTTTTAAACGGGGGAGGGGGGGGGGGGGGGGTCTCTATA
CGCCCCCACCCGGGGACATATCATTTATGCACCCCCCGGTGGGGAGAATT
GTGCTCGGATCGAAGCAGCGTGGCCACGCTTGAAGGCATTTCGCTGAAAT
CGGGCGGGCATGTTTTAAAAAACCTTCCTGTCTGGAACGCACTCGATGTA
ACAACCCCAATGGAATTTTGTTCGGATGGGGCACAACCGAACGCGGTCAG
AAAAACAAAACGCAATGGTTATCCATATCTCCTAGAGAGGTTGCTCGAAC
ACCACCATCACGTAGTCGGGGATGGATGCGTGAAATCCGCCCCTCCCCCC
TTTTCCCCTGAATGGTTGACTCTCCATGTTCTCCACCAAACCCACCAGGC
CAAGCGACCGTCCAGAGGCATAGATCCTGTCCAGTGTGATCCGATGGTCC
CCATG

Coding sequence (CDS) from alignment at F-serratus_M_contig7630:4356..8460-

>mRNA_F-serratus_M_contig7630.18898.1 ID=mRNA_F-serratus_M_contig7630.18898.1|Name=mRNA_F-serratus_M_contig7630.18898.1|organism=Fucus serratus male|type=CDS|length=672bp|location=Sequence derived from alignment at F-serratus_M_contig7630:4356..8460- (Fucus serratus male)
ATGTGGTTCCCCCCGAAGAACGTATCCCTCACACATGTGGTTCCCCCCGA
AGAACGTATCCCTCACACTATCCTTGCCGGAGGACGTGAAGCTAAAGAAG
TACGTGAAGGGTCTCGCCAAGGAAGCCGGGGCGAACAGCTCCGTGAAGCG
GCGAGAGCGCAGAGCATACATGAGGGAGCAGGTCAAAGGACTGAGTTCGT
TGGTAGGAGTGGAACCCGGGATGCTCGGCCCCAAGCTCCCCATGTATCCT
TGCCGGAGGACGTGAAGCTAAAGAAGTACGTGAAGGGTCTCGCCAAGGAA
GCCGGGGCGAACAGCTCCGTGAAGCGGCGAGAGCGCAGAGCATACATGAG
GGAGCAGGTCAAAGGACTGAGTTCGTTGGTAGGAGTGGAACCCGGGATGC
TCGGCCCCAAGCTCCCCATGGTGCTTGCGGCGTGCAGGCTCGCCAAGGAT
GAGCTGGTGTGGTACTTCCAGCACGCCTCCCAGGGATCGGTGCTTGCGGC
GTGCAGGCTCGCCAAGGATGAGCTGGTGTGGTACTTCCAGCACGCCTCCC
AGGGATCGGCCAAGCGACCGTCCAGAGGCATAGATCCTGTCCAGTGTGAT
CCGATGGTCCCCATGGCCAAGCGACCGTCCAGAGGCATAGATCCTGTCCA
GTGTGATCCGATGGTCCCCATG