mRNA_F-serratus_M_contig762.18889.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig762.18889.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 7.780e-10 Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 1
Query: 1099 EEFRIMSNVAPELEGCLQHITSDTTSTISGEE--IYGVIANDQGGVTMLVHAYSFDTLDPPLRWVMAYSGSDTTTDPILYCFSDESADEVHPVDATWTCDLSGAESDFTEVTAMDLVVACGCSGITPSP 1479
E FRI S+V P +EGC Q EE + G+ + + + A++ D D + + +A+ S+ I+YC S+E A VHPVDATWTCDL G + F +VT ++ + CGC+G TP+P
Sbjct: 447 ESFRITSDVLPVVEGCYQQTDWSFDEGDEYEEYTVSGMSGWEHIAILGMSSAFADDDGDVIMPFYLAFV-SEEDDGTIVYCVSNEDAVTVHPVDATWTCDLGGTGT-FEDVTDEEISMDCGCTG-TPAP 572
BLAST of mRNA_F-serratus_M_contig762.18889.1 vs. uniprot
Match: D7G0B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B7_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 6.410e-8 Identity = 57/180 (31.67%), Postives = 83/180 (46.11%), Query Frame = 1
Query: 1459 SGITPSPST-PIEEADLLMPSTPSPMITAXXXXXXXXXXXXSSAVTIGCDMEFSVTSDMAPVLEGCFKNAVTETTSTISGQEIYEVFANDQGGVDMLVHASTFDTLDPP---LRWAMIYAGSDTTTDGILYCYSDESADEVHPADATWLCDLSGAESNFIEVTATDLVVACGCSEFTPSP 1986
SG TPSP+ PI+ D++ + P I S+ T G F + S P ++GCF+ A + ST E Y + +LV + + + W +I+ D +LYCYS+E VHPADATW CDL G + +VTA ++ CGC+ TP+P
Sbjct: 517 SGGTPSPTLEPIDFPDVVHAPSSPPEIAP-------------SSPTCGDTESFQIISSELPDIQGCFQ-ATSTLFSTPESTEEYWSLTGEAEFESILVGSILDEDTEEEGDSTPWYLIFLSEDDDAT-VLYCYSNEQGILVHPADATWRCDLDGT-GVYSDVTAEEVSFTCGCTG-TPAP 679 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig762.18889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig762.18889.1 >prot_F-serratus_M_contig762.18889.1 ID=prot_F-serratus_M_contig762.18889.1|Name=mRNA_F-serratus_M_contig762.18889.1|organism=Fucus serratus male|type=polypeptide|length=724bp MWRASYIFLLETAAAGMLSSQGEQIPTFTRWAPRSKFELPRKVHHGKDAQback to top mRNA from alignment at F-serratus_M_contig762:274649..315958- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig762.18889.1 ID=mRNA_F-serratus_M_contig762.18889.1|Name=mRNA_F-serratus_M_contig762.18889.1|organism=Fucus serratus male|type=mRNA|length=41310bp|location=Sequence derived from alignment at F-serratus_M_contig762:274649..315958- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig762:274649..315958- >mRNA_F-serratus_M_contig762.18889.1 ID=mRNA_F-serratus_M_contig762.18889.1|Name=mRNA_F-serratus_M_contig762.18889.1|organism=Fucus serratus male|type=CDS|length=4344bp|location=Sequence derived from alignment at F-serratus_M_contig762:274649..315958- (Fucus serratus male)back to top |