mRNA_F-serratus_M_contig76.18876.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig76.18876.1
Unique NamemRNA_F-serratus_M_contig76.18876.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: A0A6H5KHS7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS7_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 2.180e-113
Identity = 177/297 (59.60%), Postives = 216/297 (72.73%), Query Frame = 2 
Query:  152 LECGVCLGLVCEPVSVSCGHTFCRTCLVKTLQRTAKRCPCCRAACHTR--AEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSSHVAQKDD--------IALVAEVVEAEFFNDGRVNVKIKLAGRHTIENHFVEEGTQGLHHCELKPYEDDVLEGTDLDELEELHSFTRNLCQGFLAPFKSQLVQSHGEMPSGALDLSMWLASFLPFYVAEKHHLLVSRCTRGRLQACLKCIENMEKIAKGVRR 1012
            L C  CL L+ EPVS+ CGHTFCR CLVK L+R  K CP C A CHTR  AEDQPQNVM+AQI K+LFPE LE+R+RETEAEK KF LCLPAF Y+VP+FPG+TL +HFFEPRYKLM++RII+T+RRFAYV          DD        IAL A V EAEF +D RV VKIKLAGRHT+   FVE GT  LH+C+L+P++DD L+     EL +LH+  + +C GFL PFK QLV++HG MP  A+ LSMW+AS LPFY  +KH L+ SRCTR R++ACL C  +ME++A+   R
Sbjct:   27 LACPACLQLLAEPVSLPCGHTFCRVCLVKELRRKPKECPSCHATCHTRQVAEDQPQNVMLAQIAKSLFPELLERRLRETEAEKAKFELCLPAFFYSVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVPSTNDDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVEDFVEAGTGNLHYCQLEPFDDDPLQEGGAGELTDLHTRAKTICNGFLGPFKGQLVEAHGRMPEDAVGLSMWMASLLPFYPPDKHSLVRSRCTRRRMRACLDCAASMEEMAQAAAR 323
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: D8LI81_ECTSI (Lon N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI81_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 2.480e-87
Identity = 140/239 (58.58%), Postives = 175/239 (73.22%), Query Frame = 2 
Query:  320 MIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSSHVAQKDD--------IALVAEVVEAEFFNDGRVNVKIKLAGRHTIENHFVEEGTQGLHHCELKPYEDDVLEGTDLDELEELHSFTRNLCQGFLAPFKSQLVQSHGEMPSGALDLSMWLASFLPFYVAEKHHLLVSRCTRGRLQACLKCIENMEKIAKGVRR 1012
            M+AQI K+LFPE LE+R+RETEAEK KF LCLPAF YNVP+FPG+TL +HFFEPRYKLM++RII+T+RRFAYV          DD        IAL A V EAEF +D RV VKIKLAGRHT+   FVE GT  LH+C+L+P++DD L+    DELE+LH+  + +C GFL PFK QLV++HG MP  A+ LSMW+AS LPFY  +KH L+ SRCTR R++ CL C  +ME++A+   R
Sbjct:    1 MLAQIAKSLFPELLERRLRETEAEKAKFELCLPAFFYNVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVQSTNNDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVEDFVEAGTGDLHYCQLEPFDDDPLQDGGADELEDLHTRAKTMCNGFLGPFKGQLVEAHGRMPEDAVGLSMWMASLLPFYPPDKHSLVRSRCTRRRMRTCLDCAASMEEMARAAAR 239
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: A0A835ZAH9_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAH9_9STRA)

HSP 1 Score: 239 bits (610), Expect = 6.750e-70
Identity = 123/255 (48.24%), Postives = 165/255 (64.71%), Query Frame = 2 
Query:  227 CLVKTLQRTAKRCPCCRAACHTRAEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSSHVAQKDDIALVAEVVEAEFFNDGRVNVKIKLAGRHTIENHFVEEGTQGLHHCELKPYEDDVLEGTDLDELEELHSFTRNLCQGFLAPFKSQLVQSHGEMPSGALD--LSMWLASFLPFYVAEKHHLLVSRCTRGRLQACLKCIENM 985
            CLVKTL RT KRCP CRA CH  A+DQP+NVM+AQI +A FP+   +R+RET+ EK       P F YNVPMFPGE L+LH FEPRY+LM+RRIIDTTRRF YVP Y+++ A   D+AL+AEV + +F +DGR  +   L GR  I +H+VE+GT GL++C+L+   D+ ++  +   +  L     N     L P  S +V++HGEMP  A +   S+++A  LP   AEKH +L    T  RL+AC   +  M
Sbjct:    2 CLVKTLTRTKKRCPTCRAVCHNCAQDQPENVMVAQIARAAFPQLYLERLRETQTEKAALRSIHPIFYYNVPMFPGEILSLHLFEPRYRLMMRRIIDTTRRFVYVPNYTNYEASIGDVALIAEVKDCDFQSDGRCYLSATLIGRSRITDHYVEDGTHGLNYCQLETLVDEPIQPHEARFVTTLVQPIANFVSSVLGPIHSDVVKTHGEMPPVAREQEFSLFIAGVLPLGNAEKHSMLACTNTLERLRACAAALGRM 256
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: A0A4D9DDG8_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDG8_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.640e-68
Identity = 128/292 (43.84%), Postives = 178/292 (60.96%), Query Frame = 2 
Query:  152 LECGVCLGLVCEPVSVSCGHTFCRTCLVKTLQRTAKRCPCCRAACHTRAEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSSHVAQKDDIALVAEVVEAEFFNDGRVNVKIKLAGRHTI-ENHFVEEGTQGLHHCELKPYEDDVLEGTDLDE-LEELHSFTRNLCQGFLAP---FKSQLVQSHGEMPSGALD--LSMWLASFLPFYVAE-KHHLLVSRCTRGRLQACLKCIENMEKIAKG 1003
            LECGVCLGL+CE V+  CGH+ CR CLV+ LQR  K CP CRA C   AED  +  ++ ++ K  FP   EQR+ ET  E+E   L LP F YN+P+FPGE L LH FEPRY+LM++RI++ +RRFAYVP YS++ A+  DIAL+AE+ E  F  DGR  ++ ++AGR TI E+ +VE+GT GL +C LK   D+  +  +  + L +     R +           K+ +V  +GEMP       LS+W+A+ LP    + KH LLVS  T  RL+ C+  ++ +     G
Sbjct:   94 LECGVCLGLLCEAVTTPCGHSLCRLCLVRALQRQTK-CPVCRAVCMINAEDHAETRLLTRLAKRAFPALYEQRLEETRQEREALKLLLPIFFYNLPIFPGEALRLHLFEPRYRLMMQRIVNGSRRFAYVPNYSNYRAKAGDIALIAELKEVRFMRDGRSELEARIAGRFTIAEDPYVEDGTGGLSYCRLKELRDESPKSAEASQALRQASEKAREMAHAIFLERRDIKAVVVDRYGEMPGPQTPEALSLWIAAVLPTENRQIKHDLLVSTDTSHRLEVCMSKLQALRGAGMG 384
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: A0A482RY16_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY16_9ARCH)

HSP 1 Score: 221 bits (564), Expect = 1.420e-63
Identity = 114/247 (46.15%), Postives = 149/247 (60.32%), Query Frame = 2 
Query:  152 LECGVCLGLVCEPVSVSCGHTFCRTCLVKTLQRTAKRCPCCRAACHTRAEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSSHVAQKDDIALVAEVVEAEFFNDGRVNVKIKLAGRHTIENHFVEEGTQGLHHCELKPYEDDVLEGTDLDELEELHSFTRNLCQGFLAPFKSQLV-QSHGEMPSGALDLSMWLAS 889
            L+C +CL LVCEP+S+SCGHTFCR CLVK L+R  K+CP CR  CH  AE+  +N+M+  +  AL PE    R+ E E EK  +    P F YN  +FPG  L+L  FEPRYKLM+RRIIDTTR FAYVP ++++ A+  D+ALV E+ E EF  DGR  ++  L  R  I  H+VE+GTQGLH+C L+   DD L      + + L    R L          +L+ Q  G  P    + S+WL S
Sbjct:   37 LDCSLCLSLVCEPISISCGHTFCRVCLVKALRRHKKQCPTCREVCHVSAENAAENIMVKTLAMALDPETYRSRLLEAEGEKSSWTALYPIFYYNSILFPGNKLSLVLFEPRYKLMMRRIIDTTRSFAYVPNFTNYHARVGDVALVVELKEVEFLADGRCLLEGLLVSRQRIAEHYVEQGTQGLHYCRLESLRDDGLGEQRRQQADYLSQQLRTLLASLGGGSSRRLLEQGLGSPPQDLENFSLWLLS 283
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: A0A6U2J5U5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2J5U5_HEMAN)

HSP 1 Score: 220 bits (560), Expect = 8.280e-63
Identity = 111/277 (40.07%), Postives = 166/277 (59.93%), Query Frame = 2 
Query:  146 NLLECGVCLGLVCEPVSVSCGHTFCRTCLVKTLQRTAKRCPCCRAACHTRAEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSSHVAQKDDIALVAEVVEAEFFNDGRVNVKIKLAGRHTIENHFVEEGTQGLHHCELKPYEDDVLEG-TDLDELEELHSFTRNLCQGFLAP---FKSQLVQSHGEMPSGALDLSMWLASFLPFYVAEKHHLLVSRCTRGRLQAC 964
            ++LEC VCL L+CEPV+  CGH+FCR CLV TL++  K+CP CRA C    E   + + ++ + KA+FP+  +QR+ E +AEK  +   LP F YN  +FP   LAL+ FEPRYK+M+ RI++++RRFAY+PK+ ++ A   D+ ++AE+ + EF  DGR +++ K   R TI+  ++E+GTQGLH C++    D V    ++   LEE  S    L    +A       ++   +G  P+ +   S WL+S LP    +KH LL    T  RL  C
Sbjct:   12 SMLECSVCLQLLCEPVTTPCGHSFCRPCLVGTLRKNKKKCPSCRAICQIEPETHSETIALSSVAKAVFPKAYQQRILEVQAEKASWDTILPIFFYNDTLFPFSPLALNLFEPRYKVMLHRIVESSRRFAYLPKFDTYQANVGDMGVIAEITDIEFLADGRAHLQAKCRDRFTIKEAWIEDGTQGLHWCKVDLVNDGVSASESERQALEEAVSDCEQLFASVMARSSHLAREIESQYGSRPADSERFSFWLSSILPVPYGDKHCLLTCLNTTERLTLC 288
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: A0A6V3MPG8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3MPG8_9EUKA)

HSP 1 Score: 212 bits (539), Expect = 2.540e-59
Identity = 117/310 (37.74%), Postives = 174/310 (56.13%), Query Frame = 2 
Query:  125 ATMSVPKNLLECGVCLGLVCEPVSVSCGHTFCRTCLVKTLQRTAKRCPCCRAACHTRAEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSSHVAQKDDIALVAEVVEAEFFNDGRVNVKIKLAGRHTIENHFVEEGTQGLHHCELKPY-EDDVLEGTDLDELEELHSFTRNLCQGFLAPFKSQLVQSHGEMP--SGALDLSMWLASFLPFYV---AEKHHLLVSRCTRGRLQACLKCIENMEKIAKGVRRAHAQAGQP 1036
            ++ S+  ++L C +CL LVC+P++V CGHTFCR CL   +QR+ K+CP CRA CH        NVM+AQI +  FP+Q EQR+ E++ E+EKF    P F YN  +FPG  L LH FE RY+ MI R + + R+F Y+P ++ + A+  D+ L+A + E EF  DGR  +K  +  R  + N +VEEGTQGLH+C+  PY E+D     D +EL  +H     L    +   K Q+V   G+ P  +  +  S WLA+F+        +   LL +  T  RL+   + +  +    +  R +   A +P
Sbjct:   24 SSASIEADMLTCPLCLNLVCQPITVPCGHTFCRVCLYMAMQRSKKKCPNCRAVCHVEPASHAVNVMLAQIAQKCFPKQYEQRLLESKQEQEKFESTSPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRKFIYLPNFTDYKAKTGDVGLLAYIDECEFLPDGRALLKATIQKRVKVTNTWVEEGTQGLHYCQFHPYVEEDKT--VDEEELNAVHKQVNGLFN-HVPGLKDQIVHHIGKQPPLTNPVLWSFWLAAFVTMVSRSGVQSMSLLKTTKTSERLKQSKRLLSQVSLPGRNNRNSGQAAAEP 330
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: A0A7S0CSC1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSC1_9EUKA)

HSP 1 Score: 210 bits (534), Expect = 1.030e-58
Identity = 107/256 (41.80%), Postives = 158/256 (61.72%), Query Frame = 2 
Query:  137 VPKNLLECGVCLGLVCEPVSVSCGHTFCRTCLVKTLQRTAKRCPCCRAACHTRAEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSSHVAQKDDIALVAEVVEAEFFNDGRVNVKIKLAGRHTIENHFVEEGTQGLHHCELKPYEDDVLEGTDLDELEELHSFTRNLCQGFLAP-FKSQLVQSHGEMP--SGALDLSMWLASFL 895
            + +++L+C +CLG+VCEP+++ CGHTFCR+CL   +QRT K+CP CRA CH        NVM+A I +  FP++ ++R  E +A K+KF   LP F YN  +FPG  L LH FE RY+ MI R + + R+F Y+P +S + A   D+ L+A V E EF +DGR  +K  L  R  I N +VEEGTQGLH+C+ + YE+      + D ++E+H+    + Q   AP  + Q+V   G+ P  S A   S W+++ +
Sbjct:   25 IEQDMLQCSLCLGIVCEPITIPCGHTFCRSCLYLAMQRTKKKCPNCRAVCHVDPSSHSVNVMLANIAQKCFPKEYKKRAEECKALKQKFQTTLPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRQFLYLPNFSDYKATAGDVGLLAYVDECEFLSDGRALLKATLVKRVVITNSWVEEGTQGLHYCQYQAYEETDKTVKEAD-VKEIHAKVNVILQS--APGLREQIVNHIGKQPPISNATQFSFWISALV 277
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: A0A6B2LCC5_9EUKA (RING-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCC5_9EUKA)

HSP 1 Score: 192 bits (488), Expect = 1.830e-52
Identity = 106/280 (37.86%), Postives = 162/280 (57.86%), Query Frame = 2 
Query:  152 LECGVCLGLVCEPVSVSCGHTFCRTCLVKTLQRTAKRCPCCRAACHTRAEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSSHVAQKDDIALVAEVVEAEFFNDGRVNVKIKLAGRHTIENHFVEEGTQGLHHCELKPYEDDVLEGTDLDELEELHSFTRNLCQGF---LAPFKS-QLVQSHGEMP---SGALDLSMWLASFLPFY----VAEKHHLLVSRCTRGRLQ 958
            ++C +CL ++ EP+SV CGHTFCRTCLV   QR  K+CP CRA C   A  Q +NV +A I+K  FP+Q  +R++E E  K+ +   LP F +N  +FPG  L LH FE RYKLMI+R+++  R+F Y+P ++++ A K D+ +VAEV+E  F +DGR  ++ ++  R  + + +VE+GT  L +C+ + ++D+      L EL    + +    +GF   L P +   L +  G  P   S    +S WL + L  +     + K  LL S   + RLQ
Sbjct:    1 MDCTICLNMLVEPISVPCGHTFCRTCLVAAQQRAQKKCPVCRAVCVIDATAQKENVQLASILKTCFPKQYAERLKEVEETKKTWKQNLPIFFFNDTLFPGGVLKLHLFEERYKLMIKRVLEGNRKFVYLPNFTNYKASKGDVGVVAEVLECRFLHDGRALLQARIVERAVVADSWVEDGTGNLAYCQYELFKDEPENDDQLQELLVTANLSLERFKGFVQRLEPIRQFTLKEQLGGFPEERSTPEAISWWLINTLSRFDGMSTSTKVALLKSNSFKWRLQ 280
[Close]
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Match: D8LDP9_ECTSI (Kinase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP9_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 9.770e-51
Identity = 83/133 (62.41%), Postives = 103/133 (77.44%), Query Frame = 2 
Query:  128 TMSVPKNLLECGVCLGLVCEPVSVSCGHTFCRTCLVKTLQRTAKRCPCCRAACHTRAEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKFALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRR 526
            T ++P   LEC VCL LVCEPVS+SCGH+FCR CLV TL+R  K+CP CRA CH  AEDQP++VM+A I +  FPE    R++E EAE+EKF   LP F YNVPMFPGE+L LH FEPRYKLM++R+++T+RR
Sbjct:   29 TATLPLAALECAVCLFLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIARTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRR 161
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig76.18876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHS7_9PHAE2.180e-11359.60RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LI81_ECTSI2.480e-8758.58Lon N-terminal domain-containing protein n=1 Tax=E... [more]
A0A835ZAH9_9STRA6.750e-7048.24PUA-like domain-containing protein n=1 Tax=Tribone... [more]
A0A4D9DDG8_9STRA1.640e-6843.84RING-type domain-containing protein n=2 Tax=Monodo... [more]
A0A482RY16_9ARCH1.420e-6346.15RING-type domain-containing protein n=1 Tax=archae... [more]
A0A6U2J5U5_HEMAN8.280e-6340.07Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A6V3MPG8_9EUKA2.540e-5937.74Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S0CSC1_9EUKA1.030e-5841.80Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6B2LCC5_9EUKA1.830e-5237.86RING-type domain-containing protein n=1 Tax=Arcell... [more]
D8LDP9_ECTSI9.770e-5162.41Kinase, putative n=1 Tax=Ectocarpus siliculosus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig76contigF-serratus_M_contig76:683551..697355 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.1
Seed ortholog evalue1.7e-73
Seed eggNOG ortholog2880.D8LI81
KEGG koko:K20779
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000151,GO:0000209,GO:0001775,GO:0002200,GO:0002204,GO:0002208,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002312,GO:0002366,GO:0002376,GO:0002377,GO:0002381,GO:0002440,GO:0002443,GO:0002449,GO:0002460,GO:0002520,GO:0002562,GO:0003674,GO:0003682,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006302,GO:0006310,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006955,GO:0006974,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010212,GO:0010390,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010629,GO:0016043,GO:0016064,GO:0016444,GO:0016445,GO:0016447,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019724,GO:0019787,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031491,GO:0031593,GO:0031974,GO:0031981,GO:0032182,GO:0032446,GO:0032501,GO:0032502,GO:0032784,GO:0032785,GO:0032879,GO:0032880,GO:0032991,GO:0033522,GO:0033554,GO:0034243,GO:0034244,GO:0034641,GO:0034644,GO:0035518,GO:0035861,GO:0036211,GO:0036351,GO:0036352,GO:0042113,GO:0042393,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045190,GO:0045321,GO:0045739,GO:0045892,GO:0045934,GO:0045935,GO:0046483,GO:0046649,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051276,GO:0051603,GO:0051716,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070530,GO:0070534,GO:0070535,GO:0070647,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090734,GO:0104004,GO:0140030,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1903827,GO:1990234,GO:1990391,GO:2000112,GO:2000113,GO:2001020,GO:2001022,GO:2001141
EggNOG free text desc.histone H2A-K13 ubiquitination
EggNOG OGsCOG2802@1,KOG4159@2759
Ec32 ortholog descriptionPeptidase S16, lon N-terminal
Ec32 orthologEc-14_003520.1
EC2.3.2.31
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400,ko04121
Exons6
Model size2012
Cds size1032
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig76.18876.1prot_F-serratus_M_contig76.18876.1Fucus serratus malepolypeptideF-serratus_M_contig76 683654..696478 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932287.7166045-UTR-F-serratus_M_contig76:683550..6836531622932287.7166045-UTR-F-serratus_M_contig76:683550..683653Fucus serratus maleUTRF-serratus_M_contig76 683551..683653 +
1690964236.0680788-UTR-F-serratus_M_contig76:683550..6836531690964236.0680788-UTR-F-serratus_M_contig76:683550..683653Fucus serratus maleUTRF-serratus_M_contig76 683551..683653 +
1622932287.85077-UTR-F-serratus_M_contig76:696478..6973551622932287.85077-UTR-F-serratus_M_contig76:696478..697355Fucus serratus maleUTRF-serratus_M_contig76 696479..697355 +
1690964236.157295-UTR-F-serratus_M_contig76:696478..6973551690964236.157295-UTR-F-serratus_M_contig76:696478..697355Fucus serratus maleUTRF-serratus_M_contig76 696479..697355 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932287.7309217-CDS-F-serratus_M_contig76:683653..6838441622932287.7309217-CDS-F-serratus_M_contig76:683653..683844Fucus serratus maleCDSF-serratus_M_contig76 683654..683844 +
1690964236.0830948-CDS-F-serratus_M_contig76:683653..6838441690964236.0830948-CDS-F-serratus_M_contig76:683653..683844Fucus serratus maleCDSF-serratus_M_contig76 683654..683844 +
1622932287.748968-CDS-F-serratus_M_contig76:694012..6942431622932287.748968-CDS-F-serratus_M_contig76:694012..694243Fucus serratus maleCDSF-serratus_M_contig76 694013..694243 +
1690964236.092388-CDS-F-serratus_M_contig76:694012..6942431690964236.092388-CDS-F-serratus_M_contig76:694012..694243Fucus serratus maleCDSF-serratus_M_contig76 694013..694243 +
1622932287.7693086-CDS-F-serratus_M_contig76:694627..6946971622932287.7693086-CDS-F-serratus_M_contig76:694627..694697Fucus serratus maleCDSF-serratus_M_contig76 694628..694697 +
1690964236.1027923-CDS-F-serratus_M_contig76:694627..6946971690964236.1027923-CDS-F-serratus_M_contig76:694627..694697Fucus serratus maleCDSF-serratus_M_contig76 694628..694697 +
1622932287.7816691-CDS-F-serratus_M_contig76:694990..6950621622932287.7816691-CDS-F-serratus_M_contig76:694990..695062Fucus serratus maleCDSF-serratus_M_contig76 694991..695062 +
1690964236.1162722-CDS-F-serratus_M_contig76:694990..6950621690964236.1162722-CDS-F-serratus_M_contig76:694990..695062Fucus serratus maleCDSF-serratus_M_contig76 694991..695062 +
1622932287.7937005-CDS-F-serratus_M_contig76:695402..6955551622932287.7937005-CDS-F-serratus_M_contig76:695402..695555Fucus serratus maleCDSF-serratus_M_contig76 695403..695555 +
1690964236.1320684-CDS-F-serratus_M_contig76:695402..6955551690964236.1320684-CDS-F-serratus_M_contig76:695402..695555Fucus serratus maleCDSF-serratus_M_contig76 695403..695555 +
1622932287.8346207-CDS-F-serratus_M_contig76:696163..6964781622932287.8346207-CDS-F-serratus_M_contig76:696163..696478Fucus serratus maleCDSF-serratus_M_contig76 696164..696478 +
1690964236.1464443-CDS-F-serratus_M_contig76:696163..6964781690964236.1464443-CDS-F-serratus_M_contig76:696163..696478Fucus serratus maleCDSF-serratus_M_contig76 696164..696478 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig76.18876.1

>prot_F-serratus_M_contig76.18876.1 ID=prot_F-serratus_M_contig76.18876.1|Name=mRNA_F-serratus_M_contig76.18876.1|organism=Fucus serratus male|type=polypeptide|length=344bp
MKEEPKRATMSVPKNLLECGVCLGLVCEPVSVSCGHTFCRTCLVKTLQRT
AKRCPCCRAACHTRAEDQPQNVMIAQIVKALFPEQLEQRMRETEAEKEKF
ALCLPAFLYNVPMFPGETLALHFFEPRYKLMIRRIIDTTRRFAYVPKYSS
HVAQKDDIALVAEVVEAEFFNDGRVNVKIKLAGRHTIENHFVEEGTQGLH
HCELKPYEDDVLEGTDLDELEELHSFTRNLCQGFLAPFKSQLVQSHGEMP
SGALDLSMWLASFLPFYVAEKHHLLVSRCTRGRLQACLKCIENMEKIAKG
VRRAHAQAGQPREAAEAAASVASNAAEAESGATAPGSAAEAAV*
back to top

mRNA from alignment at F-serratus_M_contig76:683551..697355+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig76.18876.1 ID=mRNA_F-serratus_M_contig76.18876.1|Name=mRNA_F-serratus_M_contig76.18876.1|organism=Fucus serratus male|type=mRNA|length=13805bp|location=Sequence derived from alignment at F-serratus_M_contig76:683551..697355+ (Fucus serratus male)
GCGTCCTCGTTCCGCAGACCAAATCCTCGACGTCACACATCGCCAGTTTG
GACAAATACTGACCAGAATTCGATAGTGCATTGAGCCAACGGTGACCGTC
TCCATGAAAGAGGAGCCCAAGCGTGCGACGATGAGTGTCCCAAAAAACCT
ACTCGAATGCGGGGTGTGCCTCGGATTGGTTTGTGAGCCAGTTTCGGTGA
GCTGCGGGCACACGTTCTGCAGAACCTGCTTGGTGAAAACGCTGCAACGG
ACCGCCAAGCGATGTCCGTGCTGCCGTGCTGCCTGCCATACGAGGTGCGT
GTTACCGTCTTTGCCACCAATGCGTTTGCCTGTGCTAATCTCGACTTCTA
CGAGTTTGCGTGTTGGCACTTTCCATCAGCTCCTGCTTAGCTCGTTCGGC
ACAGGTTCTGTACGTCAAGCTCCCTCAATCCAAGTGTCCACCTGAGCTGC
CGCGCTATGATTACATCTCATAGGAATGGACCCCATACCCAAGCCTCTGA
CTACCTTGTGCTGTGAGGTTACATGGATGGCTACTCTTCTGTCACGTTTT
CGAGGTTGGACGGAGTAGCGCTCGTAGAGCAGCCCTTGTTCTTGCTCCGA
AAACTGACTCCGTCTAAAGCATACGTAGACTTATACGGTACTTACTGCTC
TGCTGTAAGACTCTATTCTTGTGACTCATTTTTACGCGGCTACTACTGCT
GTCAAGTACCTGGTACCTGGTATCACTTAATTTCCACGGTAAACCTGCGA
CTAAAAATACCAAACCTGATACCAGCACATGTTTCAATAGTAAAAGTATG
ATTAGATGCTTTCAGATTTTCTTCAAATAGTAGATTGATGAGTCATGTTT
ACTCAGCACAACTTTTCCCCCGCGAGCTGTACTATCAATACTATTATACT
GGACTATTGATACTACTACTGTACTGTATTGATACTGTCTACATGTACTG
TCTGGTCGCCCCGGCGGTTCAGTTGGTAACCTCGAAATCTTCCGACGTCG
GTACGTGAGTTCGAATATTGGCGCTGTAACACGAACTGGGATTTTCTCTC
ACATCATGCCCCAACAAGTGGAGAACGATTATGTCGTGGGTACACAAAAT
TCGACTTCACGGTCGACGAGGGAAAGGGACGGCTGAATTCGCCTCACGAT
AAAAAATGAAGGCAAGCACGGCAGAAGAAAGTTGACTCTTGTGCGGCCCT
CCTGCTGTGTGCCCCCGGCTGGCGCGTCCTGTGTCGTCTAACGTCCAGAA
TAAATGGAATGACAACAACTCGTACTGGTAGGTATTATCGAAACGAGAAA
TACTTGACGACTACTTCGCCTTGTATTGTATTGTACCTGTTGGCGATTGC
ACTAACTGCTGTTTGTGCGAATGTTGCTTGCATCCTGCCTAGAACACACC
TACGAATTAGGGAAAGACATACCAGGTATTCATCACACTGCCCTCGAGCT
GTACCGACCCCACCTAGAAGCCTCTTGAAAGTTTTCATACGGTAAGTCGG
TGAATCCTTATTTAAAAGAAAAATCTGAACGCATCTAGCTAGACCTTCTT
TTACTGCGGACCATTCAATATCCGCCCTACCCCTCCCCACCCACCCGTCC
GCCCCTCCAATCTTGATCTCAACTTGGATTCTCGCTGCAAAAAAGCCTCG
ATTTCTTGTGATGAGGAGTGGTCAACCAACCCTTGTTAAGTACCGGGCTT
TTTTCGGCGTATCAAAACGTAGGTAAAATTTGCACCCGGGTCCTAAAAAC
GCGGCTAACCAACTACAATACCTGGTACGGTTGTTGACGTATAATCTAGT
GACAAAGACCAAGGATTTACTGCCCGGAGGTCGATGTGCAGCGTCCGGAG
CTGTATTCTATCTTGTGGTTACGTGTTGGAAGGATGCCATCGCGATGTGC
CAATCGATTGCAGTACTCTGGCTCACACGAAACATTTTTGTACAACTTGG
TGTACAGCGTGTATTCCTGGCGGCCTGACACATTTGGCACCCAACCCCCC
GCAAAAAGAAACCGGTCATCGACTTGGAGAAATTCTGCGAAATAGACCGA
AATGTATTACATATATATCTGTCCCATATATTTTACTAGTTGACTCAGTA
CTACTTGACAGGTAACAGTAGTACACGTATAACGCTGGCCTCATGCGACG
ATCATCGGGAAAACCGACCGAATCCCATGCACCAGAGAGATAGTTTTCGT
GCTATAACAGGCGATGTTCTATTTATAGCACAGTGCGGATGCTCTGGACG
GTTTGGATGGGTTCAGTTTTTTTTCCAGTTCAGTACTTGTAATTGTGTAA
CACCAGCAGCTATGAACTGCTGTGTGTATGTACGGTCATCACATACCTGG
TATATATATATATACGGGTTTTTAATGTGAAGACAACAGCATATCTATAT
ATTATGCATGGTCCATCACATGCAGTAGAGCATGAATCAACCGGGTAAGG
TTGAGAATCCGGCTCGTGGTCAGCTGAACAGGGAAAATTATTTGTTCGTT
GTCCCCGTTCACGCCTGAGAATTTGGTCTCGCGAGACGGGTTCGGCAGTC
CGGTCCCACGTGAGCCTGCTCATCTCGTACTCAACAGGCTGAATATGGTG
CTTACTTACGATATTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATTTAT
TCAAACCGTCAGCATACGCTTTCGGGTCAGTCCCCGAGTTTTTCGGGTCG
CTTAAATGAGTACCGATGGCATTCATTGCCGAGAATCATCCGCCACAGGG
CGAGTAGTCCTCAAGGTAGTTCCAAAGGGGTGCTGCCTTGGCATGTCACC
ATGAACCAATTAATATGCGCCTCTCTTTCCCACACCTACTATTTAATGGT
ATGAAGTGGGCATGTTAAAAGTATTGGCGTATAGCAGAATATGGGTCAAC
CGTGTAAGGTTGCCAATCCTGCTCGTGGTCAGCCGCACAGGGAAAATGGG
TATTGCCCTGTCCCCGTTCGTGCCTGAGAACTTGCTTTCGCGAGACGGGT
CTGGCAGTCCCGTCTCTGCGTCAGCCTGCTCATTCATCTCCGTACCTCGG
CTGAGTCTGGTGCTTACTTAAGGGGTTCCTCCCGAGTTCCGCGGCGGCGT
CCATTTATTTATTTAGCTACATATACCAAGAACTGATGAAATGTTTGTCG
TGCCTTACGCTACGTCCTGGTCCTTGCCTTGCCTTCCAATATTCATAGCA
ATACACCTGCAGTTGCATTTTGTATTGCACGTTGGTTGTTGAACGCGAGC
CTGGACACGACGCAACCCTCAAGATTTTTTATCCGCTTCGCTTTATAGTT
GTACAGTACTTCACCGGGTACAGTATATTTTAATATTGTACCTCCTTTTC
CCTATTAATAGTATAACAAGAGATAATCCTCTTCGCTTCGTATTACACAG
TATTCCGTACCAGGTACAGAACAGTGTACTCTATAGACTATATATGTATC
TGGAGTATTACTAGTACTATAATCGACGGTGCGTACGGCAGGTCCGGGGA
TTTTAATGCGTCAGGTCTCGAAAATACATTTAGTATACTCTGTTGTATAT
AGAGTACATGGTTTCAATGTGCCGCATTTCGTTTTGATCTGATCGAATAG
CTAATGTGTCAGCGCGTGTGAAATATGCCATCGTTCGAAACTATTAATAG
TCTCCTATAGAAGACCCTCTTTAATGTAACACATCAAAAGGCCAAAAGGA
CCTACCTGCACGTACCAGGTAGGTGTCAAGCCCTGTACCTGGGTGGCAGG
ATTCTTGAAAGACCAACAGATTTCTACTCGTACTGTGGTACGTATTTGGA
CTACTACCCAAGGACTTACAAAACAGCACTCAAAACGAGACAATGAAACA
GGCTCTTTTTTTAGCATGCATATTCCGGTTGCCCATAATCCAATTATCGA
GAAAGATGTTTGTTTATTAAGTACTCCAGAATCTATTTCGTGTATGTAGA
GGATTCTGGAAATCGAATATTGTTTTTGTGTGTGTTCACAACAAACAAAC
AACGTTTCAGAGACGGTCGAAACCCGACACGCCCTACCGCTACACCTCGC
AACTATTACAATTAATACTGTATTAATGACACTATTAATAATAAAAACAC
TATTAGACTTTCAATACTAGATACACACTGGTCCATAGTGACCTGCTAAG
GCAGCACTCGTTCGGAATTACCTTGAGATTTACTTACCCTGTGCCGGCGG
ACTCTCGGCAGTGAACGCCATCGGTACGCAATAGCGTGACCCGAAAAACT
CGGGACTGACCCGATGGCGTATATATGGACGACACCGCGGAACTCGGGAG
GAATCCCGTAAGTAAGCACCATATTCAGCCTGAGTATAGAGATGAGCAGG
CTGACGCGGGACGGGACGGCCGAAACCGTCTCGCGAGACCAAATTTTCAG
GCACGAACGCGGACAGGGAAATATCCATTTTCCCTGTTCAGCTGACCACG
AGCAGGATTGGCAACCTTACCCGGTTGATCCAAAATCTTGATATATGTGA
TGAACATGCATACGTAGTCTACATACATACATACTCTCGTTAGGTGCTCA
AGCATTTTTTAGTATAGACCGATTATAATAAGCTAAAGATTTTAGAGTTA
CCGCAAAAGAAATCCTACACGCTTTGGACTAGCCAGGATACTGGATACTG
GTATGGCTTCGCGGGTAACCTCTGGGATTAAGTGGCGATTATACGGCCGA
TGTTCTTTCCAAGGATACTTGGCTTGTTGTGGAGCATTTAGCCTCTCCTC
TGTCTCTACTGCGTCGGTCGCACTCCGCTAATTTTTATTATTAATAATAG
CATCGCGTATGGTCTAGTAGTCCACGAGCCACTCAATTCACTCCACAATC
TGTGGGGTGCTGTGCTGTGCTGTGCTGTGCTGTGCCGGGCATCCGAGCTT
GCTTGATACTGCGCCGGTGGAAGAGTCTCGTGTCGATGCGCGGATAGCGG
GTTATTAAACAAATCTCCGTCGCTTGTGCGGTTCCAGTATCCCTGGGGCC
TCGATTCAAAAAGAATGAAAACGCTCAAGCCGCTGAAAAACACCAACGAA
AATACGGAAGGACGTTGTCGTCATACATCATAGCGATCGAGATCTCCGAA
GGCTGCGGGTAGTTGAAGTTGAGGTTGTCAGCAGCCTGCAGCCACGTTGA
TTGGCCGACTAATCTGAATCACAGTAGTTCCAACGGTACTGTTACGGTAA
CACGCCAGGGACGAGTAGCCCTGACGCATTATGTACAACCTCTTTGATAT
CTCAATCTCGCTCCAGTACTCAAGTGTCAAGCTTTTAGGATCTCGGCCAC
CCCCAAGCGATCCAGGACAATTTATACATAGTATTATAGTGTATCCTGGA
AAACGCCCGATTTTTATTTCCCGACTTTCCGAAATCCTGAAATCTTCACT
CCGCACCAGGTTTGCCGAGAAAGAGCTATTAAATACCCGTATTATATAGT
AATATTTGCAACCGCCATCATGGCTGATATATTATTATTAGTACTATTAT
TGCGCGGCACGTTTTGAAAATCTGGACCTAGACTATTTAAAGCAATTTGA
CACGTGGTTTGTAGCGCAGTCGCCGGACATCCAAAGATCCTCTCAATTTC
ATCGACAGTTTTTCTTCGTAGACTTCTGGCCCACCCAGAATCACATCGAT
AGAAAATCGGAGGTAAGTCCTTGATTGTCTATCAATACGCGACTTCGTTA
CGAATCGTGTGAGAGCGTTTCAGCCGCAATTTCGGAAGATTAAGCCTCGG
ATCGCTGTTTACCCCCCCCCCGCAGTGGCTACAGGCAAATTCCTACGCTA
TGGTCAGCACTCGCTGCAGAGTATGAATCATCTGGGTGTTTAAAGAAAAA
TCCGAACAGCTGTTATTGTTGCCACGCCTGTGCCAGGTCAGTATTTTCTG
TCCCCGTTCGCGCCTGGCAGTTTGATCTGGCGCGACCGGGTTCGGGTTCG
GCCACACTCAGGCTGAATCGGGTGCTTACTCACGAGATTCCTCCCGTTTT
CCGCGGCGGCGTCAATCCACATCATACTCAGTATACTACAGTACAGTCAA
CCGCCTTCGGGTCAGTCCTGAGCTTATCGGGTCACACAATTGCGTGTCGA
TGGCGTTCAATTGCCCCGAGAGTCCGCCGGCACAGTAACGGATGTTGCCT
TTTCAGGGATCATCAGGGATCATCATGGACATCATGGACCAATTTTTATG
CCTCTCTTTTTTCCACACCTACTTTTGGTACAGCTGTACAGAATACCGTA
GTGGATATACTGTATGCGATATGATAGGTGAATGTGTCGGAGTCCGATGA
ACGATCCCAGGCATCAAATTCTACCGATGCTTCAATTTTGCAACAAACAT
TTGAACGATAAAGATTAGATTTTGAAACTAGAACGACCAGTAACACTGCT
TATTTATAGTAGTCTAGAAATTATGTGGAAATTAGCAGAGCAGATAAACA
TACTGAGTTCAACAATAATAGGGAAATTAGAGTCGATAAATTAAACGTAC
CAACAAACATATCTCGGCATAAGGCTAACCTCTGGAGACGGCGAAACAAA
AAAACAACTACAAAAATGTGGGATTTCTGTGGCCAAAAAAAGCTCGGAGA
AAAATTGTAGGTGGCCCCTTAGTCTATGGGATGGAGGAAAAAAAATAACC
GGCGAATATACCAAGTCGACCCCGGCGTTTTCTGCCACCCATCACCGCAC
AAAGACAGGCGCAAGTATTACACATAGCAGAGTATGGATCAGCCGAGTAA
ACTTGCCAGTCCTGCTCGTGGTCAACTGAACAGGGAACAATAATGTTTCT
CTCTCCTCGTTTGCGCCTGAGAATGTGGTCTCGCGAGACTCGGTCGTTCA
GTACATAATTACGAGTATATCGCAAATAGAGTACGCAGAGCGACATCGTT
TCGATGGTGAGTCGCCGGATGCTCGTACGCGCAGTCCGTCTCTGCTTGAT
GTCCGGCGTCACCCATTCAACCGCTCCCGCCGCCGGCGATCAGCTTGTCC
GGGCCCATCACCTCAACAGCTTCTATAAATTTCTTCCAAATCTGCTGCTC
CGGCGATTCGCACAACTACTGCAGCTCGGCACCCATCGTATAACAGCACT
GGCGAGCTCTTCTTTACCGATCTTTGATAGGAGGGGGATAGGAGGGATGC
TACAGTCCCGACCTCCCAATCGTGCTTGGGAAGGCGTGAATCATTTCTGT
GGCGAAATAAACTTGTACGAGAAAAACAGCCTCCCACATAATTTCGCATT
TTCTGTAGGGCGGAATTTCCGTGCTTTTGGGGCGCTCATAGCGCGCCGTT
TACAATTTTTTCGCCACAGAAATTTCATCTTGTTTTTTGTTTTTTTTTAC
GGTCGTTTCTGTCTCCCATAAATGTTGGCCCAACCGGTTCCTGCCGCCAT
CACTATGGCATGGTTGGTTTGTCGTAAATCGATAATCTCGATGAGTTTGA
ATAAAAAGCCTGAACGCATCTACTAGACCTTCTGAGCATCCCTCAATCAG
GGGGAACGATGTCAAGACGTTTAGGTGGGGGAGAAATCTGAACGTATTTA
GACCTTCTGGCATTCAAACGGCTTATTTCCAAACAACACGGGGAAACAAA
AAAATATGCTTTCAGGATGATACTTGGATCTTTGCTTGATACGTTTCGTC
ATTACCCTCGAGCCACACCTGGACGTGGAGCGGGACACAGCTTGTGGTTC
ATAAAAGCCGCGAACCGGGAACAGCATAGGCATAGGCACCCTGGGAAGGT
TAATGTTGTGGGGAATTTGGCATAAAACCAAAACACCAGGCTGCGTAAAG
CGTCGTGTTGACATCGCCGCCATGACAACTTCAGAGGTTGATACCGCAGA
ATCACCCCGAACCACACGGGTCCATCCGTACCATCTCTTTGTGGTGACGT
ACACCTTCACGATCTCTGTATAGATGGTTGTTTAAACACTGGAGATGTGG
TGTACGGTGCTCGGAGTGTAGGTCGATTCGGCCGTCCAATATAGATCAGC
ATCGAGTCGGTATATGGTCACCCATACATCAAGAGTATGGGTCAACCGGA
TAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGAAAATTGATATTT
CCCTGTCCGCGTTCGCGCCTCTGATAATTTGGTCTCGCGAAACGGATTCG
GCAGTCCCGTTCCCCGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCT
GGTACTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCATATGT
TTATTTAAAACCGCCATAGGCCATCGAGTCAGTCCCGAGTTTAGCGGGTC
ACGCAATTGCGTACCGATGGCAGTCATTGCCGAGAGTCCGCGGCACATGG
CCAGTACACCTCAAGGTAGTTCCTAACGAGTGCTACCTTGGGAGGTCACC
AAGGACAAATGAACATGCGCCTCTCTTTCCCACCCCTCTATTGGTATGAA
GTGGCCATAGCATTATGAAAGTACCGGCGATAGTTAAGTGATCAAAGTCG
TGTGTGCGAAGTGAGGTTGTGGTTGTTTTTGGAACCTTGGTTTGAAGTCG
ATGGCTGTACTGGTAAAAGTGCTGGATATAGTACCCTCTCTGTTGTTTTG
TGTACAGAGTTCTGAAAATCAGCGGGGTGTACATGATTCACAAGTCATGC
GGTAGGGTCTTTGGGCGGTGCGGGACTTTCACTACTGCTGTATAACAGCA
GACGTACGTGATTCACATGTCATATGGTAGGGTCTCTGGGCGGTGCGGGA
CTTTCTATACGACAACGGACTATCACTACTGCTATACGACAACGGACTAT
CACTACTGCTATACGGCAACGGACTATCACAACTGCTGTACAATAGACTG
TCATTACTGCCGGTCGTCGCCCCGGTAGCTCAGTTGGTGCTCTCGCGACC
TTCTGACACGTTGGGACGTGAGTTCGAATCCCGATAACCGGGATTTTCCC
TCACTTTAAATAAAATAAAATAAAAATGCCCAAGAAGTGGGGAACGATTA
AATCGTAAGTACTGTACTCAAATTTTGACTTATCGGTCGATGGGGGAAAG
GACCGGCTGAATCCTTCTTGCGAGAAAATAAAGGCATGCACACAGAAGGA
AGGTGGATGAAAAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTG
GTACACGTCCAACGAACTTAATGTCCAGAATAAATGGCAAGAAAACACAC
ACACACACACACTGCTATACTACTGCATATTATTTTTACTCCTTTTACTA
CAGCAGGCTTTATAATACTGATTCCTGTATTGACACTCCGACCAAGTGCC
CAGCAACCGTGCACACTATGCGCCGAGTCCGTCAGCCCCACCCGATACGG
CGCATCTCCAGTATGTCGCCATGGGCGAGATGACGCGGCTGTAGCATCGT
TCTTCGGATCACCACACGCAAAGCACACTCGAACTGAGCTTAACGCGCTC
GCCGTGTTCGAGTTTACCGCTTGCCCCCCTGGGACCCCTGGACCTGCCGG
TACACATTTCGAAGTATTTTGCAGCAGCACATGGGGGATACAGTAGTATA
CCTGGTATATATATATATATATATTCGTTTCTCGCTTACGGCAAAAGGGC
CTCAATGTGCTAGGTCACCAGTTCCACGTACTGCAACATTGCCATCCTGT
CTGTGGTCACGAAGCGTCTTCCCATCTCACGCTTTCTGCTAAGGAAGCCA
TAATAAATGACCTGATTTTGTCAAGAACGAACTCTCGAATTTGCACTATA
ATAGTGATCTCCGAGGTTACCACTGTAATAGTTCAACTCGGGCAAAAAAG
GCGGATCGTGCATACTGTACCAACTAGACACACTTTGCGTTAGAGCCGTA
CTCGAAGCTTGGGGGGGGCGGGGGCGGGGGGAATGACTCAGAATGATTCA
TAGCGGAAAGTTTAACCGTGTCAACGCGTGAATGAGCAAAGTCAACCATG
AGACCAGACCATGAAAGCTGACGAGCTTGCATTGCGATGTACTCTGTGAT
GAAAATAAAACAAAGGCAGTAACCGGGGAGAAGAGATGAAATGATTCGAG
TCTCGAGTCTCTGAAAAGAAGTTTGCGACATGCGCCGCGGCCAAAATTGG
GCGAGTTTTGACAACGTTGAAAGGCTACTACCAATAGTACACCTAGTAAT
AGCAATACTGATGTTCTGGTGCGGTAGTGCGATCCCCTGAAAGGGCTGCC
CTATTCACGGAATCAGGCATGCTGTAATACAATACACTACACGTCGCGGC
AGTACGCTTCACCAACTTTGCATCGTAGTATTTTTGGAGAATTTTCGTGT
GTCACTTGAAAACAGTTTTCGAGTCGTTGTGGCTTCTCCCCAACGAAATC
CCCTGTACCACAGGGGCGTAAATAGGGGTGAAATTTTGTGGCAAGACCCT
CACCCATAGGATTTCATCGGCATGCCGCCTGGCCCCGTTCACCCTCCTCT
CGCCGCATTCAGGGCCGAGGATCAACCGCAAAATGTGATGATCGCGCAGA
TCGTGAAGGCTCTTTTCCCGGAGCAGCTGGAGCAACGAATGCGAGAAACA
GAGGCAGAAAAGGAGAAATTCGCGCTCTGTCTGCCCGCGTTCTTGTACAA
CGTCCCGATGTTCCCGGGCGAAACTCTCGCCCTACACTTCTTCGAGCCGC
GCTACAAGCTCATGATAAGGCGAATCATCGACACGACACGAAGGTACCGA
GAAAGGAGAGGCACGCAACTGCCTTTTGGTGCCCTTCATGCATCGTTCGT
ATGCAAAGGATCCGGGGCATGCTGCGCGTTTCAGCCGTCCGTCCCTTGCC
GCTCCCCTCATCCTTCCCCTGTAAGCCAACCAAGTTAATATATATATATA
TAATTTATGTTATCTCTCGTGCGCCTTTCACGTAACGATGACATGCGGCC
GGTCCAACGTTAAATGGATCCATGTGACCCCCCCGTCCCCCCGACATCGT
TCCTTGCTACCCTTCTTCCAGTAGAATCCTGGCGCAGTCATACCATAACA
AGAGAGACTCACATCTTCCTCTCCCCTGCCTCTACTGGTTTGCCCCGACG
CCATTCCCCGTGTCTCCACATCGGCAGATTCGCGTACGTTCCAAAATACT
CTTCTCACGTGGCCCAAAAGGACGACATCGCTCTTGTGGCGGAAGTGGTG
AGTTTTCCGCGCTTATGCTCGGGCGGTGTTGGGGGACGGGGAAGCGAAAG
CCCGGCTGATATTCCGCACCACGTCGAGGAGGCGTCGTCGTATATCTGGA
AGTTCTGGAAGATATTTATGCGATGTCTTATCACAAACCCTCGAGTCTCG
TGCCTCCGACTCCGTCATACGCGCTGGCATTCTGCGCCGACCTCGCTTGG
CTCAATCGTGCTTAGCACAGCACCCTATCTCGTTTCTACACCTTTAAAAG
CGTAAAACGTACAAAAAACCCGTGCGCTTTTTTTCGACAGGTCGAGGCCG
AGTTTTTCAATGATGGCCGAGTAAATGTAAAGATTAAGCTTGCGGGCAGG
CACACCATCGAGGTGAGCACGGTCGCGAGTTTCCTTCGCAGTTTTTCAAA
GACGATGCGCGCGAGTCCACCATGTGATTCCCTCTCTGCCCCTCACTTTC
ATGACCGCCGACGCTGCAGGCAGAGCGTTGTCGGACTGACGTCACAGATG
CCACAAGACATTGATTGACTTCTGTTGGTACTCCTGGGGAAACTGGATTG
GTGTGCTGGTATATGGCGGATTCGTCCCGTCGTCTAGCCGTTCGCTTTGC
CCTTGGCGAGGTGTTCGCCCTATGGCGTAAATGACCCGATGGATTTTGAC
CCGGGCTTTCTCTCTGTCTGGCTCTTGTTGGATTGTGTTGTACTTGGAAC
AGAATCACTTCGTGGAGGAAGGCACGCAAGGGCTGCACCACTGCGAGCTC
AAGCCGTACGAGGACGATGTGTTGGAAGGGACGGACCTGGACGAGCTCGA
GGAGCTTCATTCGTTCACTAGGAATTTGTGTCAGGGATTCTTGGCGCCAT
TCAAAGTGCGTATATAGCCACGTACCAGACTTGCCCAAACTGCGGCGTGC
GGATTGGGTGCCCGGCGTATATAGAGATGGGGTGGGCTGCTTACTGCTTC
ACATGAGCGACAAGTCGTACGTTGGTCGCGGCTTTCCCCGACAGGTGTCA
TGGAAATTTACTCTTGTCACGCCTTGGCGAGGCCCGCTGATCGTCGACCC
TTGCTGCGGATTTTTTCTTTTAATATTCTATTAATAGGGCGTATCGCTGA
CTTTCTTCGTGAAGCGCAAGAGTAGATACTCCAGTGTAAGCCTTACGCTT
ATCATCACCCTGCTCTTCCTAGTTTGTGTTGACCCCTTGTGAATCACCCA
CTCGGTTCGAAACCCCACGATGCGAGACCCCCCCCCTCGACCCTTGCTGC
GGATTTTTTCTTTTAATATTCTATTAATAGGGCGTACCGCTGACTGTCTT
CGTGAAGCGCAAGAGTAGATACTCCGGTGTAAGCCTTACGCTTATCATCA
CCCTGCTCTTCCTAGTTTGTTTTGACCCCTTGTGAATCACCCACTCGGTT
CGAAACCCCACCATGCGAGCCCCCCCCCACCTTCACACACATTATTCGTT
TTTTCCTCATCAGAGCCAATTGGTGCAGTCGCACGGGGAAATGCCTTCGG
GCGCGTTGGACCTGTCGATGTGGCTGGCGTCGTTCCTCCCATTCTACGTG
GCCGAAAAGCACCATTTGTTGGTGTCGAGATGCACACGAGGACGACTCCA
AGCATGCCTTAAGTGCATCGAAAACATGGAGAAGATCGCAAAGGGGGTCC
GAAGGGCGCACGCGCAAGCGGGACAACCACGTGAGGCGGCGGAAGCGGCA
GCATCGGTCGCTTCCAACGCAGCCGAAGCAGAATCTGGGGCGACGGCGCC
TGGATCTGCAGCGGAAGCAGCAGTATGATGGCAGAAAAATGAAGATAGCA
AACTCTGTCGACAGTTTCTACCGAGCCTCCCGCCCATCGCTTCGCCTGCC
GGAGCAAAAATTGCGCTCCCGCAGCAGACTAATTTCACGCCGAGCATTTT
CTCTAAAGTTGTAGTGGGTACCGTGTGAAAGCTTCACCAACTGCTTAATG
ACGAGTGTGCGCTTGCAAGCCCAATAAGAAGTCAATTTTGGACGTCGTGG
GCTTCGTCTTGGCGGCGGAGTGAAGAGCTTAGAGGAGAGTCAAGATTTAT
CCCCCAGGCCATGTAGCGGATGCGAATCGTAATAAACGGGGAGGGGACCG
GGGAACTACAAGAAAGATCCCACGTGTACCGATCTCTTCAGGTCCTGGCC
TTCGCTTCGGATGCAGTTGGTGTATAGGATGGATTTACTTCGTGAAGCGT
GGTTGGTTGGTTGGTTACATGCGCACTCTACAACCTCGGGATTATGGTTG
GTTGGCCGGTGGTCTTTGCTTTTCCATTTTTTTTTTCCATTCCCCGATGA
CTTCCCCTCTTTTTTTTCCCCTTTTCCTTTGTGTTAGCTAAACACTACAC
TACACTACACTGCCGGAAGGGGGAAATTCTTCATACGGGCGTCGTAGTAC
CCTGTACTTGAAAGCTGTTGGGAAATGGGTAACTTGAGAAGAAGGAGGCT
TAACGAGGGATGGGATTATAGAGTTGTTCGTGGGGTTGCTGTTCGATCTT
CGATGCGCGCCGCACCTACAGGGAGCTTGCGTGTGTAGCACTCTGGTTGA
TTATGCCTGTGAGTGGTGTGAGGCCCACGGTGTTTTTTGTATTTGCTGTC
TGTTCTGTGAAAACCCTCTGTAACATATAAGTGCCGTGTATACCACATTC
CATTA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig76:683551..697355+

>mRNA_F-serratus_M_contig76.18876.1 ID=mRNA_F-serratus_M_contig76.18876.1|Name=mRNA_F-serratus_M_contig76.18876.1|organism=Fucus serratus male|type=CDS|length=2064bp|location=Sequence derived from alignment at F-serratus_M_contig76:683551..697355+ (Fucus serratus male)
ATGAAAGAGGAGCCCAAGCGTGCGACGATGAGTGTCCCAAAAAACCTACT
CGAATGCGGGGTGTGCCTCGGATTGGTTTGTGAGCCAGTTTCGGTGAGCT
GCGGGCACACGTTCTGCAGAACCTGCTTGGTGAAAACGCTGCAACGGACC
GCCAAGCGATGTCCGTGCTGCCGTGCTGCCTGCCATACGAGATGAAAGAG
GAGCCCAAGCGTGCGACGATGAGTGTCCCAAAAAACCTACTCGAATGCGG
GGTGTGCCTCGGATTGGTTTGTGAGCCAGTTTCGGTGAGCTGCGGGCACA
CGTTCTGCAGAACCTGCTTGGTGAAAACGCTGCAACGGACCGCCAAGCGA
TGTCCGTGCTGCCGTGCTGCCTGCCATACGAGGGCCGAGGATCAACCGCA
AAATGTGATGATCGCGCAGATCGTGAAGGCTCTTTTCCCGGAGCAGCTGG
AGCAACGAATGCGAGAAACAGAGGCAGAAAAGGAGAAATTCGCGCTCTGT
CTGCCCGCGTTCTTGTACAACGTCCCGATGTTCCCGGGCGAAACTCTCGC
CCTACACTTCTTCGAGCCGCGCTACAAGCTCATGATAAGGCGAATCATCG
ACACGACACGAAGGGCCGAGGATCAACCGCAAAATGTGATGATCGCGCAG
ATCGTGAAGGCTCTTTTCCCGGAGCAGCTGGAGCAACGAATGCGAGAAAC
AGAGGCAGAAAAGGAGAAATTCGCGCTCTGTCTGCCCGCGTTCTTGTACA
ACGTCCCGATGTTCCCGGGCGAAACTCTCGCCCTACACTTCTTCGAGCCG
CGCTACAAGCTCATGATAAGGCGAATCATCGACACGACACGAAGATTCGC
GTACGTTCCAAAATACTCTTCTCACGTGGCCCAAAAGGACGACATCGCTC
TTGTGGCGGAAGTGATTCGCGTACGTTCCAAAATACTCTTCTCACGTGGC
CCAAAAGGACGACATCGCTCTTGTGGCGGAAGTGGTCGAGGCCGAGTTTT
TCAATGATGGCCGAGTAAATGTAAAGATTAAGCTTGCGGGCAGGCACACC
ATCGAGGTCGAGGCCGAGTTTTTCAATGATGGCCGAGTAAATGTAAAGAT
TAAGCTTGCGGGCAGGCACACCATCGAGAATCACTTCGTGGAGGAAGGCA
CGCAAGGGCTGCACCACTGCGAGCTCAAGCCGTACGAGGACGATGTGTTG
GAAGGGACGGACCTGGACGAGCTCGAGGAGCTTCATTCGTTCACTAGGAA
TTTGTGTCAGGGATTCTTGGCGCCATTCAAAAATCACTTCGTGGAGGAAG
GCACGCAAGGGCTGCACCACTGCGAGCTCAAGCCGTACGAGGACGATGTG
TTGGAAGGGACGGACCTGGACGAGCTCGAGGAGCTTCATTCGTTCACTAG
GAATTTGTGTCAGGGATTCTTGGCGCCATTCAAAAGCCAATTGGTGCAGT
CGCACGGGGAAATGCCTTCGGGCGCGTTGGACCTGTCGATGTGGCTGGCG
TCGTTCCTCCCATTCTACGTGGCCGAAAAGCACCATTTGTTGGTGTCGAG
ATGCACACGAGGACGACTCCAAGCATGCCTTAAGTGCATCGAAAACATGG
AGAAGATCGCAAAGGGGGTCCGAAGGGCGCACGCGCAAGCGGGACAACCA
CGTGAGGCGGCGGAAGCGGCAGCATCGGTCGCTTCCAACGCAGCCGAAGC
AGAATCTGGGGCGACGGCGCCTGGATCTGCAGCGGAAGCAGCAGTATGAA
GCCAATTGGTGCAGTCGCACGGGGAAATGCCTTCGGGCGCGTTGGACCTG
TCGATGTGGCTGGCGTCGTTCCTCCCATTCTACGTGGCCGAAAAGCACCA
TTTGTTGGTGTCGAGATGCACACGAGGACGACTCCAAGCATGCCTTAAGT
GCATCGAAAACATGGAGAAGATCGCAAAGGGGGTCCGAAGGGCGCACGCG
CAAGCGGGACAACCACGTGAGGCGGCGGAAGCGGCAGCATCGGTCGCTTC
CAACGCAGCCGAAGCAGAATCTGGGGCGACGGCGCCTGGATCTGCAGCGG
AAGCAGCAGTATGA
back to top