prot_F-serratus_M_contig76.18875.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig76.18875.1
Unique Nameprot_F-serratus_M_contig76.18875.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length191
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig76.18875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36784FAMILY NOT NAMEDcoord: 13..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..167
NoneNo IPR availableTMHMMTMhelixcoord: 121..140
NoneNo IPR availableTMHMMTMhelixcoord: 150..167
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 92..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig76contigF-serratus_M_contig76:669458..683307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig76.18875.1mRNA_F-serratus_M_contig76.18875.1Fucus serratus malemRNAF-serratus_M_contig76 667839..683412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig76.18875.1 ID=prot_F-serratus_M_contig76.18875.1|Name=mRNA_F-serratus_M_contig76.18875.1|organism=Fucus serratus male|type=polypeptide|length=191bp
MKASRIAPKNRLRRRQKDEIAPADVVSPLDSDEQEEVVANLAQEAWRQTA
LIKRGFFGMLVLLNLAAVRSLFQLLWTPDEVLPNRNAPHTSPSVWFLVAC
AGHLFGLYFAIGVAQGNRRLVFPGLVVSSTNLVFWLAVLAWHRVTNPSSF
LIPLSPAVAVGMSLYVLTSERTLGHEIEELKRLQYNHKKL*
back to top