mRNA_F-serratus_M_contig76.18868.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI) HSP 1 Score: 345 bits (884), Expect = 1.370e-111 Identity = 209/438 (47.72%), Postives = 273/438 (62.33%), Query Frame = 1
Query: 1 AVNFTVSTKAPMLPIPLDNEMLWGLRKFSDRFAGKTMTQASIKALQCAPLAWACLAVREADTMSAAKRNLAASKSMQEIAVPGWIKVIEKAINDTEGAIRMPTGWKEALYYTTLGTGV--RETFMQKPVTCMTKFKPLKTEYTKGAAWWYDTHEDVAAKLPSGTSPEDALKELEKDIWLQSVISRKDMTKAQEASEFDESNDLTGGGD--GVEGGDASGGAANWVIPTSAASAVLAATPRRSNSAAGGSGEAVDSPDSLARMAAAAHLQELAGSRAAGDGTTRGKVKDKPNE-IPDDFFYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAK--------DEDIEIAEHNPIGSPSAMSRLNPNGDPMSRRQHYA-VKREKDLAKKDEVDKENKKARTEFLETRKKGLAAMELANIHVGKLSTNIERLVELR 1272
A+NF +S KAP L I L +M+WG ++ D+F G+ M QA +KALQC P+A A LAV++ + M + RN A SK MQEIAVPGWIKV E AI D++G + P GWK+ALYYTTLGTG R+TFM+ P TKFK LKTEYTKGA W+DTH + + +L SGT DAL +L D++ + TK A E D + D+ EG SG +PT AA A SP +LAR AA A +E+A A+G G+ + + NE IPDD++YPYLLLAC W+SW GNTPSEWK+LA+SSGP+ R K ++ I + NPIGSP AM +N NGD +SRRQ++A +K+EK+ KKD +KEN R E L+TRK+GLAAME AN HVG+LS+NI+++V+L+
Sbjct: 2 AINFDISMKAPPLNIDLTEDMMWGFHRYCDKFGGRKMNQAGLKALQCVPIAHAALAVKQGEDMKSDVRNAAMSKRMQEIAVPGWIKVCEAAIKDSQGELVFPHGWKDALYYTTLGTGENPRQTFMKNPKALFTKFKALKTEYTKGAQLWFDTHPESSTELNSGTQTTDALDDLSADMY-------RKATKGNAAKE-DAAADIFFNTPRRSAEGVVVSGVTTTSPLPTPAADAXXXXXXXXXXXXXXXXXXXT-SPQALARRAAEALRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQ 430
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: A0A6H5JXM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM3_9PHAE) HSP 1 Score: 235 bits (600), Expect = 3.420e-68 Identity = 163/441 (36.96%), Postives = 240/441 (54.42%), Query Frame = 1
Query: 1 AVNFTVSTKAPMLPIPLDNEMLWGLRKFSDRFAGKTMTQASIKALQCAPLAWACLAVREADTMSAAKRNLAASKSMQEIAVPGWIKVIEKAINDTEGAIRMPTGWKEALYYTTLGTGVRE--TFMQKPVTCMTKFKPLKTEYTKGAAW-WYDTHE-DVAAKLPSGTSPEDALKELEKDIWLQSVISRKDMTKAQEASEFDESNDLTGGGDGVEGGDASGGAANWVIPTSAASAVLAATPRRSNSAAGGSGEAVDSPDSLARMAAAAHL-------------QELAGSRAAGDGTTRGKVKDKPNEIPDDFFYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEDIEIAEHNPIGSPSAMSRLNPNGDPMSRRQHYAVKREKDLAKKDEVDKENKKARTEFLETRKKGLAAMELANIHVGKLSTNIERLVELR 1272
AV+F S KAPMLPI + ++ LRKF + KTMTQ ++K L PL + LAV+EAD MSAA+RNLAASK MQEIAVPG+IK+IE A++ EG +MP WK +YYTTLG+G + TFM+KP T +TKFK K +YT+ W W DT++ + ++LPSGT+ +D+L+EL +W +S + ++D ++ +A + ++ L+ G G DA+G A + + QE + +G G+ E+P+ + +P+LLL ++ W G PSEWK+L SS GP ++K D+ + NP+ SP+ MSRLNPNGD +SR +R + ++ R E L+T+KKGLAA+E AN H+ + N++R+VEL+
Sbjct: 106 AVDFPKSQKAPMLPINRPEDFMFALRKFCGTYGNKTMTQPALKMLPSIPLVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSTMEGPPQMPHKWKVMVYYTTLGSGTSKAKTFMEKPSTVLTKFKSYKAKYTR--VWLWLDTNDKNTPSELPSGTNTQDSLEELNDAMWFESDMYKRDKARSDKAG-AEVADFLSRGAAGSV--DAAGSPAGSPVTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREQEREQDKGGDEGKHEGE------EVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGG----DVTVDSENPVCSPAVMSRLNPNGDALSRSSRRGKQR---------PTRNFQETRKEALKTKKKGLAALEAANTHIETIGANMKRMVELK 522
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: A0A6H5KFH5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFH5_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.710e-32 Identity = 70/128 (54.69%), Postives = 92/128 (71.88%), Query Frame = 1
Query: 1 AVNFTVSTKAPMLPIPLDNEMLWGLRKFSDRFAGKTMTQASIKALQCAPLAWACLAVREADTMSAAKRNLAASKSMQEIAVPGWIKVIEKAINDTEGAIRMPTGWKEALYYTTLGTGVRETFMQKPVT 384
AV+F S KAPMLPI L + ++ LRKF + KTMTQ ++K LQ PL + LAV+EAD MSAA+RNLAASK MQEIAVPG+IK+IE A++ G ++MP WK +YYT+LG+GV ++ + VT
Sbjct: 2 AVDFPKSQKAPMLPINLSEDFMFALRKFCGTYGNKTMTQPALKMLQSIPLVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGFIKLIEHALSIMGGPLQMPHKWKVMVYYTSLGSGVYLMWLHQFVT 129
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: A0A6H5K6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E0_9PHAE) HSP 1 Score: 125 bits (313), Expect = 5.520e-30 Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = 1
Query: 862 EIPDDFFYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEDIEIAEHNPIGSPSAMSRLNPNGDPMSRRQHYA-VKREKDLAKKDEVDKENKKARTEFLETRKKGLAAMELANIHVGKLSTNIERLVELR 1272
E+P+ + +P+LLL ++ W G PSEWK+L SS GP ++K D+ + NP+ SP+ MSRLNPNGD +SRRQH+A +KREK+ +K DK ++A E LET+KKGLAA+E A+ H+ + N++R+VEL+
Sbjct: 30 EVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGG----DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQERKKAADKRLQEAWKEALETKKKGLAALEAASTHIETIGANMKRMVELK 163
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: A0A6H5JTM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM3_9PHAE) HSP 1 Score: 122 bits (306), Expect = 8.660e-28 Identity = 67/137 (48.91%), Postives = 95/137 (69.34%), Query Frame = 1
Query: 865 IPDDFFYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEDIEIAEHNPIGSPSAMSRLNPNGDPMSRRQHYA-VKREKDLAKKDEVDKENKKARTEFLETRKKGLAAMELANIHVGKLSTNIERLVELR 1272
+P+ + +P+LLL ++ W G PSEWK+L SS GP K++K + D+ + NP+ SP+ MSRLNPNGD +SRRQH+A +KREK+ K +KE ++AR E LET KKGLAA E AN HV + +++R+VEL+
Sbjct: 137 VPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGA----DVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQEMKAAAEKELQEARKEPLET-KKGLAAFEAANTHVETIGADMKRMVELK 268
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: A0A6H5KGF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF1_9PHAE) HSP 1 Score: 117 bits (294), Expect = 7.630e-27 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 1
Query: 862 EIPDDFFYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEDIEIAEHNPIGSPSAMSRLNPNGDPMSRRQHYA-VKREKDLAKKDEVDKENKKARTEFLETRKKGLAAMELAN 1221
E+P+ + +P+LLL ++ W G PSEWK+L SS GP K++K D+ + NP+ SP+ MSRL+PNGD +SRRQH+A +KREK+ +K DKE +++R E LET+KKGLAA+E AN
Sbjct: 117 EVPEWWIFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGG----DVNVDSENPVCSPAVMSRLDPNGDALSRRQHFAAIKREKEQERKATADKELQESRKETLETKKKGLAALEAAN 233
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: A0A6H5KJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW8_9PHAE) HSP 1 Score: 114 bits (285), Expect = 3.150e-25 Identity = 64/138 (46.38%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 862 EIPDDFFYPYLLLACMWTSWGGNTPSEWKYLASSSGPQKRKKSSAKDEDIEIAEHNPIGSPSAMSRLNPNGDPMSRRQHYA-VKREKDLAKKDEVDKENKKARTEFLETRKKGLAAMELANIHVGKLSTNIERLVELR 1272
E+P+ + +P+LLL ++ W G PSEWK+L SS G K++ D+ + NP+ SP+ MSRLNPNGD +SRRQH+A +KREK+ +K DKE + LET KKG AA+E AN HV + N++R+VEL+
Sbjct: 120 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGLSKKRTGG----DVTVDSENPVYSPAVMSRLNPNGDALSRRQHFAAIKREKEEERKAAADKELQXXXXXALET-KKGPAALEAANTHVDSIGANMKRMVELK 252
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: A0A6H5JUT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT5_9PHAE) HSP 1 Score: 103 bits (257), Expect = 2.430e-23 Identity = 57/102 (55.88%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 1 AVNFTVSTKAPMLPIPLDNEMLWGLRKFSDRFAGKTMTQASIKALQCAPLAWACLAVREADTMSAAKRNLAASKSMQEIAVPGWIKVIEKAINDTEGAIRMP 306
AV+F S KAPMLPI L + ++ LRKF + KTMTQ ++K LQ P + LAV+EAD MSAA+RNLAASK MQEIAVPG+ K+IE A++ +G ++MP
Sbjct: 2 AVDFAKSQKAPMLPIDLSEDFMFALRKFCGTYGNKTMTQPALKMLQPIPRVHSALAVKEADKMSAAQRNLAASKCMQEIAVPGF-KLIEHALSTMDGPLQMP 102
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: A0A6H5JVT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT0_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 8.720e-19 Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 1
Query: 1 AVNFTVSTKAPMLPIPLDNEMLWGLRKFSDRFAGKTMTQASIKALQCAPLAWACLAVREADTMSAAKRNLAASKSMQEIAVPGWIKVIEKAINDT---EGAIRMPTGWKEALYYTTLGTGV 354
A+N VS +AP LP+ L N+++ F + G Q S KALQC P+AWACLAV+EA+ S R+ S+ QEIA+PGWIK+ +AI ++ + +R P G + LY+ TLG +
Sbjct: 2 ALNLEVSNRAPALPVELTNDLMDSFGIFCATYGGTPRGQQSQKALQCFPIAWACLAVKEAEKKSKEVRDRDVSRCYQEIALPGWIKLCHRAITESAESDNPLRFPAGLESKLYFPTLGVAI 122
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Match: A0A6H5KHV4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHV4_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.010e-11 Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 1 AVNFTVSTKAPMLPIPLDNEMLWGLRKFSDRFAGKTMTQASIKALQCAPLAWACLAVREADTMSAAKRNLAASKSMQ-EIAVPGWIKVIEKAI 276
A++ V+ +AP LP+ L N+++ F + G + Q S KALQC P+AWACLAV+EA+ S R+ S+ EI +PGWIK+ +AI
Sbjct: 2 ALDLEVTNRAPALPVELTNDLMDSFGIFCATYGGTPLGQQSQKALQCFPIAWACLAVKEAEKKSKEVRDRDVSRCYHDEIELPGWIKLCNRAI 94 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig76.18868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig76.18868.1 >prot_F-serratus_M_contig76.18868.1 ID=prot_F-serratus_M_contig76.18868.1|Name=mRNA_F-serratus_M_contig76.18868.1|organism=Fucus serratus male|type=polypeptide|length=424bp AVNFTVSTKAPMLPIPLDNEMLWGLRKFSDRFAGKTMTQASIKALQCAPLback to top mRNA from alignment at F-serratus_M_contig76:523960..530393+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig76.18868.1 ID=mRNA_F-serratus_M_contig76.18868.1|Name=mRNA_F-serratus_M_contig76.18868.1|organism=Fucus serratus male|type=mRNA|length=6434bp|location=Sequence derived from alignment at F-serratus_M_contig76:523960..530393+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig76:523960..530393+ >mRNA_F-serratus_M_contig76.18868.1 ID=mRNA_F-serratus_M_contig76.18868.1|Name=mRNA_F-serratus_M_contig76.18868.1|organism=Fucus serratus male|type=CDS|length=2544bp|location=Sequence derived from alignment at F-serratus_M_contig76:523960..530393+ (Fucus serratus male)back to top |