mRNA_F-serratus_M_contig76.18867.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig76.18867.1
Unique NamemRNA_F-serratus_M_contig76.18867.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: D7FPG4_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG4_ECTSI)

HSP 1 Score: 462 bits (1188), Expect = 3.140e-155
Identity = 265/490 (54.08%), Postives = 296/490 (60.41%), Query Frame = 1
Query:    1 RRLDASVAKYSDFADIMTSNHPAILYNFEELLPSFKRWQRQGKADVDFLRGAFGNMVVPVVECSS-EGYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRD-------------SADGESVETPFFFADDWLNWWCDEQGQKDYRFVYIGPRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGG-LTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEG---------EWERQCELAMRTNSGLNVTDFANIVVGRAHYLLSGEKRARGTGATLERTGWASITGEPENDFRESRGDSGGGDGGDRRVWHDERWKVFALEKIAAALRDLSTAPFVDHVFLDDAGLINDAGVGTPDEH-TDDGLRKDARAGR-RSVGATLACVERYL 1392
            RRLDAS A+YSDF  +M +N P                 + G+ADVDFLR  FG+M VPVVECS  EGYGEER +SMTL EYLDAVH    DG+   P    S ++ GG VLYLKDWHFQRL R                  SA G ++ETP FF DDWLNWWCD QGQ DYRFVYIGP GS+T LHHD  N F WSFNVCG KHWTLFP EA+P LYDR+GR+LA DVR    DP+ FP L+ APRLEV Q PGEAIFVPSGWHHQVVN GDG   GG LT+SVN NWFNGF+LD V +FL SEL AVRAAL+HLR  M G G         EWE QCEL MR NS  NVTDFA +V  RA +LL     AR    +L          +PE       G SG G       W  ERW V AL+++ A LR+L  AP  DHVFLDD G         PDE     G   D   G  R +  TL  VE YL
Sbjct:    6 RRLDASTAEYSDFVYVMKNNTP-----------------KDGRADVDFLRQEFGDMEVPVVECSPLEGYGEERRVSMTLREYLDAVH----DGERPEPTGGSSSDSGGGPVLYLKDWHFQRLVRXXXXXXXXXXXXXXXXXASAAG-AMETPSFFRDDWLNWWCDRQGQDDYRFVYIGPPGSFTGLHHDVLNSFSWSFNVCGSKHWTLFPTEATPDLYDRYGRDLAKDVRSGRADPDKFPRLDAAPRLEVYQGPGEAIFVPSGWHHQVVNTGDGREGGGGLTVSVNTNWFNGFNLDKVAAFLHSELSAVRAALDHLRETMSGGGGAGGTGGRREWENQCELVMRANSSFNVTDFARLVTARAQHLLG----ARAAQDSL-------CDDDPER--CRGSGASGRGSSSGSGAWQQERWVVLALQQLRAVLRELLVAPSADHVFLDDGG----DSASLPDEDGATSGEGGDIEGGSDRGLRETLDAVETYL 456          
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: A0A024TFP1_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFP1_9STRA)

HSP 1 Score: 244 bits (623), Expect = 4.630e-72
Identity = 141/355 (39.72%), Postives = 190/355 (53.52%), Query Frame = 1
Query:    4 RLDASVAKYSDFA-DIMTSNHPAILYNFEELLPSFKRWQRQGKADVD--FLRGAFGNMVVPVVECS-SEGYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRDSADGESVETPFFFADDWLNWWCDEQG---QKDYRFVYIGPRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCELAMRTNSGLNVTDFANIVVGRAHYLLSGEKRAR 1047
            R+DAS   Y +F    M  N P ++ N     P ++ W++    DV+  FLR  FG+ VVPVV    +EGYG E   +MTL  YL  +  G+         ++  Q+       Y+KDWHF R       D  +  +  TP FF DDWLNWW D+     + DYRFVY+GP GS TPLHHD    + WS N+CG K W LFP   +  L+DR GR  AT+  +   D   FP L  A  + VVQ  GEA+FVPSGW+HQV NL         T+SVN+NWFN +SL+ + +FL  EL AV   + H R     + EW   C++ +R N G++  D A ++  R  + LS +   R
Sbjct:    9 RVDASDLSYDEFCKQYMGPNRPVLITNIGADWPIYQTWRQGDNGDVNVAFLRAHFGDAVVPVVGYGKTEGYGGEDRGTMTLDAYLALLESGK---------AEAKQQ-------YMKDWHFTR-------DFPETAAYTTPIFFQDDWLNWWWDQPTTPTRDDYRFVYLGPAGSTTPLHHDVLLSYSWSINICGRKEWLLFPPTETWKLWDRSGRCTATNATE--FDATQFPHLATAHHVRVVQGVGEALFVPSGWYHQVQNLDRD------TLSVNHNWFNAYSLEQMWAFLQHELAAVEREIGHCRDSFDSDDEWLDHCQVVLRANIGMSYVDVAALLRARKAWYLSADDAIR 332          
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: W4GAV2_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAV2_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.030e-69
Identity = 130/348 (37.36%), Postives = 182/348 (52.30%), Query Frame = 1
Query:    4 RLDASVAKYSDFADI-MTSNHPAILYNFEELLPSFKRWQRQGKADVD--FLRGAFGNMVVPVVECSS-EGYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRDSADGESVETPFFFADDWLNWWCDEQGQ--KDYRFVYIGPRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCELAMRTNSGLNVTDFANIVVGRAHYLLS 1029
            R+DA+   Y  F ++ M  N P ++ N     P +  W+R    DV+  +LR  FG+  VPVV     + YGEE   +M L  YL  +  G                    A  Y+KDWHF R       D   G    TP +F DDWLNWW D+Q     DYRFVY+GP  S TPLHHD    + WS N+CG K W +FP   +  L DR GR  A     + +D   FP +  A  ++VVQ  GEA+FVPSGW+HQV NL       G T+S+N+NWFN +SL+ + +F+ +EL AV   ++H R     + +W   C++ +R N G++  +FA ++  R  + L+
Sbjct:   11 RIDAAALSYEAFCELYMAPNRPVLIRNIGLDWPIYHAWRRSEHNDVNHAYLRATFGHATVPVVGYGRLDAYGEEDRCTMPLAMYLTLLESGEAQA----------------AQKYMKDWHFTR-------DFPHGPVYTTPEYFQDDWLNWWWDQQADIHDDYRFVYLGPANSTTPLHHDVLLSYSWSINICGKKEWLMFPPTETWKLRDRSGRYTAPSA--NTVDATAFPNVTSARYIKVVQEVGEALFVPSGWYHQVRNLE------GTTLSINHNWFNAYSLERMWAFMQAELHAVEQEIDHCRETFDSDDDWHHHCQVLLRANIGMHFNEFAALLQARKDWYLT 327          
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: G4YKL4_PHYSP (JmjC domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YKL4_PHYSP)

HSP 1 Score: 235 bits (599), Expect = 6.670e-69
Identity = 132/345 (38.26%), Postives = 176/345 (51.01%), Query Frame = 1
Query:   10 DASVAKYSDF-ADIMTSNHPAILYNF-EELLPSFKRWQRQGKADVDFLRGAFGNMVVPVVECSSEGYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRDSADGESV-ETPFFFADDWLNWWCD--EQGQKDYRFVYIGPRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCELAMRTNSGLNVTDFANIVVGRAHYLLS 1029
            DA+   Y  F A  M  N P +L N  ++  P   +W+   + +   L+  +G    PV       YG E   ++ L EYL+ +  G                       YLKDWHF           A G  V ETP FF DDWLNWW D  E+ + DYRFVY+GP GSWTPLHHD    + WS NVCG K W  +  +  P L DR GR +  DV  + +D E +P    A  + V+Q  G+AIFVPSGW+HQV NL D       TIS+N+NWFNG+++  +  F   E  AV   LE L+   L   E+  QC+L M  N+G+N  +F  ++  +A YLL+
Sbjct:    5 DAATLSYEAFCARYMARNRPVLLRNVTDKWFPGAAQWKDGQRINFQHLKAKYGAAEAPVASGDVAEYGAEERCTLRLDEYLELIENGTV------------------GKRYLKDWHFVH---------AFGHDVYETPPFFKDDWLNWWWDHKEKSESDYRFVYLGPAGSWTPLHHDVFRSYSWSVNVCGRKEWIFYHPDDEPKLKDRFGRFVLPDVTAEDVDREKYPHFHEAKPIYVIQETGDAIFVPSGWYHQVRNLED-------TISINHNWFNGYNVRELWEFFKREYAAVEHELEDLKEMGLVGREFVDQCQLVMLANTGINYVEFRELLYAKASYLLA 315          
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: A0A225X319_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X319_9STRA)

HSP 1 Score: 234 bits (598), Expect = 9.930e-69
Identity = 132/344 (38.37%), Postives = 176/344 (51.16%), Query Frame = 1
Query:   10 DASVAKYSDF-ADIMTSNHPAILYNF-EELLPSFKRWQRQGKADVDFLRGAFGNMVVPVVECSSEGYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRDSADGESV-ETPFFFADDWLNWWCD--EQGQKDYRFVYIGPRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCELAMRTNSGLNVTDFANIVVGRAHYLL 1026
            DA+   Y DF A  MT N P +L N  ++  P   +W+   K +   L+  +G  + PV       YG E   +M L EYL+ +  G+                      YLKDWHF           A G  + ETP FF DDWLNWW D  E+   DYRFVY+GP GSWTPLH D    + WS NVCG K W  +  +    L DR GR +  DV    +D E +P+   A  + V+Q  G+AIFVPSGW+HQV NL D       TIS+N+NWFNG+++  +  F   E  AV  ALE L+   L   E+  QC+L M  N+G+N  +F  ++  + + LL
Sbjct:    5 DAATLSYDDFCARYMTPNRPVLLRNVTDKWFPKAAQWRDGQKINFKHLKEFYGAALAPVTSGDVAEYGAEDRCTMRLDEYLELIESGKA------------------GKRYLKDWHFVH---------AYGHDIYETPPFFKDDWLNWWWDHKEKSDSDYRFVYLGPAGSWTPLHQDVFRSYSWSVNVCGRKEWVFYHPDDESKLKDRFGRFVVPDVAVGNIDKEKYPQFHEAKPVYVIQETGDAIFVPSGWYHQVKNLED-------TISINHNWFNGYNIRELWGFFKREYAAVEHALEDLKEMGLVGREFVDQCQLVMLANTGINYVEFRELLYAKTNVLL 314          
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: A0A329T2P2_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T2P2_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.020e-68
Identity = 140/349 (40.11%), Postives = 178/349 (51.00%), Query Frame = 1
Query:   10 DASVAKYSDF-ADIMTSNHPAILYNFEELLPSFKRWQRQG-KADVDFLRGAFGNMVVPVVECSSEGYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRDSADGESVE-TPFFFADDWLNWWCD--EQGQKDYRFVYIGPRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCELAMRTNSGLNVTDFANIVVGRAHYLLSGEKR 1041
            DA    Y DF A  M  N P +L N  +   S  R  R G K +  +L+  +G  + PVV      YG E   +M L EYLD +  G                       YLKDWHF           A G  V  TP FF DDWLNWW D  E+ + DYRFVY+GP GSWTPLH D    + WS NVCG K W  +  +    L DR GR + +DV    +D EN+P    A  + V+Q  G+AIFVPSGW+HQV NL D       TIS+N+NWFNG+++  +  F   E  AV   LE L+   L   E+  QC+L MR N+G+N  +F  ++  +A  LL  EKR
Sbjct:    5 DAMTLSYEDFCARYMAPNRPVLLRNVTDAWFSKARQWRDGRKINFKYLKEHYGAALAPVVSGDVAEYGAEDRWTMRLDEYLDLIENGTA------------------GKKYLKDWHFVH---------AFGHDVYVTPPFFKDDWLNWWWDHKEKSESDYRFVYLGPAGSWTPLHQDVFRSYSWSVNVCGRKKWVFYHPDDESKLKDRFGRLVVSDVTVGNIDKENYPHFHEAKPVYVIQETGDAIFVPSGWYHQVENLED-------TISINHNWFNGYNVRELWDFFKKEYAAVERELEDLKEMGLVGREFVDQCQLVMRANTGINYLEFRELLYAKARELL--EKR 317          
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: A0A6A3P0T0_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3P0T0_9STRA)

HSP 1 Score: 234 bits (596), Expect = 6.360e-68
Identity = 137/361 (37.95%), Postives = 180/361 (49.86%), Query Frame = 1
Query:   10 DASVAKYSDF-ADIMTSNHPAILYNF-EELLPSFKRWQRQGKADVDFLRGAFGNMVVPVVECSSEGYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRDSADGESVETPFFFADDWLNWWCD--EQGQKDYRFVYIGPRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCELAMRTNSGLNVTDFANIVVGRAHYLLS-----GEKRARGTGATL 1065
            DA+   Y  F A  M  N P +L N  E+  P    W+   + +   L+  +G    PV       YG E   +M L EYL+ V                  E       YLKDWHF       G D       ETP FF DDWLNWW D  E+ + DYRFVY+GP GSWTPLHHD    + WS NVCG K W  +  +    L DR GR +  DV  + +D E +P    A  + V+Q  G+AIF+PSGW+HQV NL D       TIS+N+NWFNG+++  +  F   E  AV   LE+L+   L   E+  QC+L M  N+G+N  +F  ++  +A+ LLS     G K + G G  L
Sbjct:    5 DAATLSYEAFCARYMARNRPVLLRNVTEQWFPRAAHWRDGRRINFQHLKAQYGAAEAPVASGDVAEYGAEERCTMRLDEYLELV------------------ETGAAGKRYLKDWHFVHAF---GHDF-----YETPPFFKDDWLNWWWDHKEKSESDYRFVYLGPAGSWTPLHHDVFRSYSWSVNVCGRKEWVFYHPDDEMKLKDRFGRFVLPDVTAEDVDREKYPHFHEAKSVYVIQETGDAIFIPSGWYHQVKNLED-------TISINHNWFNGYNVRELWGFFKREYAAVEHELENLKEIGLVGREFVDQCQLVMLANTGINCVEFRELLYAKANDLLSQREQPGIKSSGGQGRDL 332          
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: A0A485KUP5_9STRA (Aste57867_11851 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUP5_9STRA)

HSP 1 Score: 233 bits (593), Expect = 7.250e-68
Identity = 134/354 (37.85%), Postives = 183/354 (51.69%), Query Frame = 1
Query:    7 LDASVAKYSDFADI-MTSNHPAILYNFEELLPSFKRWQ-RQGKADVDFLRGAFGNMVVPVVEC--SSEGYGE-ERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRDSADGESVETPFFFADDWLNWW----CDEQGQKDYRFVYIGPRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCELAMRTNSGLNVTDFANIVVGRAHYLLSGEKR 1041
            +DA+V  Y  F D  M  N P ++ N     P F++W+   G+ D + L  AFG+  VPVV    +  GYGE E    M L +YL  +                   A+G +  Y+KDWHF R       D        TP +F DDWLNWW    CD     DYRFVY GP GS+TPLHHD    + WS N+ G K W L+P   +P L DR GR  A D      +   FP +  A  + +VQ  G A+FVPSGW+HQV NLG+       T+S+N+NWFN ++L  + +FL  EL AV   + H R     + EW   C+L +R N G+N+ +F +++V R  Y  + ++R
Sbjct:   16 VDAAVLSYEAFCDTYMAKNVPVLVSNVGADWPVFRQWRDATGRVDHNALAAAFGDAQVPVVSFGQAEAGYGEDEDRQLMRLGDYLVLL-------------------ATGQSQRYMKDWHFTR-------DFPTAAMYTTPLYFQDDWLNWWWGRKCDND---DYRFVYFGPGGSFTPLHHDVLESYSWSINIVGQKEWLLYPPSQTPKLLDRFGRTSARDAT--TANATQFPGVASARHVTIVQDVGTALFVPSGWYHQVRNLGE-------TLSINHNWFNAYTLRRIWAFLQRELQAVEREIAHCRDGFDSDDEWTNHCQLLLRANIGMNMGEFRDLLVARLKYYDTNDQR 331          
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: D0MYT3_PHYIT (JmjC domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MYT3_PHYIT)

HSP 1 Score: 232 bits (592), Expect = 1.050e-67
Identity = 144/366 (39.34%), Postives = 183/366 (50.00%), Query Frame = 1
Query:   10 DASVAKYSDF-ADIMTSNHPAILYNFEELLPSFKRWQRQG-KADVDFLRGAFGNMVVPVVECSSEGYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRDSADGESVETPFFFADDWLNWWCD--EQGQKDYRFVYIG------PRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCELAMRTNSGLNVTDFANIVVGRAHYLLSGEKRARGTGATLERTG 1077
            DA+   Y  F A  MT N P +L N  +   S  R  R G K +  +L+  +G  + PVV      YG E   +M L EYLD V                  E+      YLKDWHF       G DS       TP FF DDWLNWW D  E+   DYRFVY+G      P GSWTPLHHD    + WS NVCG K W  +  +  P L DR GR +  DV    +D E +P+   A  + VVQ  G+AIFVPSGW+HQV NL D       TIS+N+NWFNG+++  +  F   E  AV   LE L+   L   E+  QC+L M  N+G+N  +F  ++  +A  LL  E+R      +L R G
Sbjct:    5 DATTLSYEAFCARYMTLNRPVLLRNVTDTWFSKARHWRDGRKINFKYLKEHYGAALAPVVSGDVAEYGAENRWTMRLDEYLDLV------------------ESKMAGKKYLKDWHFVHAF---GHDS-----YVTPPFFKDDWLNWWWDHKEKSDSDYRFVYLGEFVLTRPAGSWTPLHHDVFRSYSWSVNVCGRKKWVFYHPDDEPKLKDRFGRFVVPDVTIGKIDTEQYPQFHEAKPIHVVQETGDAIFVPSGWYHQVENLED-------TISINHNWFNGYNVREMWKFFKREYAAVERELEDLKEMGLVGREFGDQCQLVMLANTGINYVEFRELLYAKASQLL--EEREDPDDNSLARVG 335          
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Match: W2R2S1_PHYPN (JmjC domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R2S1_PHYPN)

HSP 1 Score: 232 bits (591), Expect = 3.450e-67
Identity = 128/339 (37.76%), Postives = 172/339 (50.74%), Query Frame = 1
Query:   10 DASVAKYSDF-ADIMTSNHPAILYNFEEL-LPSFKRWQRQGKADVDFLRGAFGNMVVPVVECSSEGYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDWHFQRLRRDGGRDSADGESVETPFFFADDWLNWWCD--EQGQKDYRFVYIGPRGSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVRKDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGLTISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCELAMRTNSGLNVTDFANIVVGRA 1014
            DA+   Y +F A  M  N P +L N  +   P   +W+   K +  +L+  +G  + PVV      YG E   +M L EYLD +  G                       YLKDWHF          +   E   TP  F DDWLNWW D  E+ + DYRFVY+GP GSWTPLHHD    + WS NVCG K W  +  +  P L DR GR +  DV    +D E +P+   A  +  +Q  G+A+FVPSGW+HQV NL D       TIS+N+NWFNG+++  +  FL  E  AV   LE L+   L   E+  QC+L M  N+G+N  +F  ++  +A
Sbjct:    5 DATTLSYEEFCARYMAPNRPVLLRNVTDTWFPKAMQWRDGRKINFKYLKEHYGAALAPVVSGDVAEYGAEDRWTMRLEEYLDLIENGTA------------------GKKYLKDWHFVH--------AFGHEIYVTPPLFKDDWLNWWWDHKEKSESDYRFVYLGPTGSWTPLHHDVFRSYSWSVNVCGRKKWIFYHPDDEPKLKDRFGRFVVPDVTVANIDKEQYPQFHEAKPMYAIQETGDAVFVPSGWYHQVENLED-------TISINHNWFNGYNVRELWGFLKREYSAVELELEDLKEMGLVGREFVEQCQLVMLANAGINYLEFRELLYAKA 310          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig76.18867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPG4_ECTSI3.140e-15554.08JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A024TFP1_9STRA4.630e-7239.72JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
W4GAV2_9STRA1.030e-6937.36JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
G4YKL4_PHYSP6.670e-6938.26JmjC domain-containing protein n=1 Tax=Phytophthor... [more]
A0A225X319_9STRA9.930e-6938.37JmjC domain-containing protein n=1 Tax=Phytophthor... [more]
A0A329T2P2_9STRA1.020e-6840.11JmjC domain-containing protein n=1 Tax=Phytophthor... [more]
A0A6A3P0T0_9STRA6.360e-6837.95JmjC domain-containing protein n=1 Tax=Phytophthor... [more]
A0A485KUP5_9STRA7.250e-6837.85Aste57867_11851 protein n=1 Tax=Aphanomyces stella... [more]
D0MYT3_PHYIT1.050e-6739.34JmjC domain-containing protein n=2 Tax=Phytophthor... [more]
W2R2S1_PHYPN3.450e-6737.76JmjC domain-containing protein n=7 Tax=Phytophthor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig76contigF-serratus_M_contig76:515297..522190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score447.6
Seed ortholog evalue7.1e-123
Seed eggNOG ortholog2880.D7FPG4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Cupin-like domain
EggNOG OGsKOG2131@1,KOG2131@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size1687
Cds size1380
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932286.1902068-UTR-F-serratus_M_contig76:515296..5153441622932286.1902068-UTR-F-serratus_M_contig76:515296..515344Fucus serratus maleUTRF-serratus_M_contig76 515297..515344 +
1690964235.4149506-UTR-F-serratus_M_contig76:515296..5153441690964235.4149506-UTR-F-serratus_M_contig76:515296..515344Fucus serratus maleUTRF-serratus_M_contig76 515297..515344 +
1622932286.4696515-UTR-F-serratus_M_contig76:521931..5221901622932286.4696515-UTR-F-serratus_M_contig76:521931..522190Fucus serratus maleUTRF-serratus_M_contig76 521932..522190 +
1690964235.543509-UTR-F-serratus_M_contig76:521931..5221901690964235.543509-UTR-F-serratus_M_contig76:521931..522190Fucus serratus maleUTRF-serratus_M_contig76 521932..522190 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932286.2316341-CDS-F-serratus_M_contig76:515344..5153621622932286.2316341-CDS-F-serratus_M_contig76:515344..515362Fucus serratus maleCDSF-serratus_M_contig76 515345..515362 +
1690964235.428212-CDS-F-serratus_M_contig76:515344..5153621690964235.428212-CDS-F-serratus_M_contig76:515344..515362Fucus serratus maleCDSF-serratus_M_contig76 515345..515362 +
1622932286.2811594-CDS-F-serratus_M_contig76:518528..5186391622932286.2811594-CDS-F-serratus_M_contig76:518528..518639Fucus serratus maleCDSF-serratus_M_contig76 518529..518639 +
1690964235.439515-CDS-F-serratus_M_contig76:518528..5186391690964235.439515-CDS-F-serratus_M_contig76:518528..518639Fucus serratus maleCDSF-serratus_M_contig76 518529..518639 +
1622932286.2943032-CDS-F-serratus_M_contig76:519017..5190751622932286.2943032-CDS-F-serratus_M_contig76:519017..519075Fucus serratus maleCDSF-serratus_M_contig76 519018..519075 +
1690964235.4503272-CDS-F-serratus_M_contig76:519017..5190751690964235.4503272-CDS-F-serratus_M_contig76:519017..519075Fucus serratus maleCDSF-serratus_M_contig76 519018..519075 +
1622932286.3113315-CDS-F-serratus_M_contig76:519298..5195091622932286.3113315-CDS-F-serratus_M_contig76:519298..519509Fucus serratus maleCDSF-serratus_M_contig76 519299..519509 +
1690964235.4615934-CDS-F-serratus_M_contig76:519298..5195091690964235.4615934-CDS-F-serratus_M_contig76:519298..519509Fucus serratus maleCDSF-serratus_M_contig76 519299..519509 +
1622932286.328642-CDS-F-serratus_M_contig76:519955..5200341622932286.328642-CDS-F-serratus_M_contig76:519955..520034Fucus serratus maleCDSF-serratus_M_contig76 519956..520034 +
1690964235.472605-CDS-F-serratus_M_contig76:519955..5200341690964235.472605-CDS-F-serratus_M_contig76:519955..520034Fucus serratus maleCDSF-serratus_M_contig76 519956..520034 +
1622932286.3636563-CDS-F-serratus_M_contig76:520287..5203041622932286.3636563-CDS-F-serratus_M_contig76:520287..520304Fucus serratus maleCDSF-serratus_M_contig76 520288..520304 +
1690964235.484466-CDS-F-serratus_M_contig76:520287..5203041690964235.484466-CDS-F-serratus_M_contig76:520287..520304Fucus serratus maleCDSF-serratus_M_contig76 520288..520304 +
1622932286.383852-CDS-F-serratus_M_contig76:520356..5204311622932286.383852-CDS-F-serratus_M_contig76:520356..520431Fucus serratus maleCDSF-serratus_M_contig76 520357..520431 +
1690964235.5026662-CDS-F-serratus_M_contig76:520356..5204311690964235.5026662-CDS-F-serratus_M_contig76:520356..520431Fucus serratus maleCDSF-serratus_M_contig76 520357..520431 +
1622932286.4181068-CDS-F-serratus_M_contig76:520690..5208321622932286.4181068-CDS-F-serratus_M_contig76:520690..520832Fucus serratus maleCDSF-serratus_M_contig76 520691..520832 +
1690964235.5157428-CDS-F-serratus_M_contig76:520690..5208321690964235.5157428-CDS-F-serratus_M_contig76:520690..520832Fucus serratus maleCDSF-serratus_M_contig76 520691..520832 +
1622932286.431892-CDS-F-serratus_M_contig76:521262..5219311622932286.431892-CDS-F-serratus_M_contig76:521262..521931Fucus serratus maleCDSF-serratus_M_contig76 521263..521931 +
1690964235.5323408-CDS-F-serratus_M_contig76:521262..5219311690964235.5323408-CDS-F-serratus_M_contig76:521262..521931Fucus serratus maleCDSF-serratus_M_contig76 521263..521931 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig76.18867.1prot_F-serratus_M_contig76.18867.1Fucus serratus malepolypeptideF-serratus_M_contig76 515345..521931 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig76.18867.1

>prot_F-serratus_M_contig76.18867.1 ID=prot_F-serratus_M_contig76.18867.1|Name=mRNA_F-serratus_M_contig76.18867.1|organism=Fucus serratus male|type=polypeptide|length=460bp
MTSNHPAILYNFEELLPSFKRWQRQGKADVDFLRGAFGNMVVPVVECSSE
GYGEERHMSMTLLEYLDAVHGGRRDGDGHSPRSDGSQEASGGAVLYLKDW
HFQRLRRDGGRDSADGESVETPFFFADDWLNWWCDEQGQKDYRFVYIGPR
GSWTPLHHDYRNFFHWSFNVCGGKHWTLFPKEASPLLYDRHGRNLATDVR
KDALDPENFPELEGAPRLEVVQAPGEAIFVPSGWHHQVVNLGDGGLHGGL
TISVNNNWFNGFSLDSVRSFLSSELVAVRAALEHLRRDMLGEGEWERQCE
LAMRTNSGLNVTDFANIVVGRAHYLLSGEKRARGTGATLERTGWASITGE
PENDFRESRGDSGGGDGGDRRVWHDERWKVFALEKIAAALRDLSTAPFVD
HVFLDDAGLINDAGVGTPDEHTDDGLRKDARAGRRSVGATLACVERYLHC
SPDTDDRED*
back to top

mRNA from alignment at F-serratus_M_contig76:515297..522190+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig76.18867.1 ID=mRNA_F-serratus_M_contig76.18867.1|Name=mRNA_F-serratus_M_contig76.18867.1|organism=Fucus serratus male|type=mRNA|length=6894bp|location=Sequence derived from alignment at F-serratus_M_contig76:515297..522190+ (Fucus serratus male)
CGAAGACTGGACGCATCGGTCGCCAAGTACTCGGATTTCGCCGACATCAT GACATCAAATCATCCGGTCAGCCCGAGTTTGGTCTACTGTGTTGCGTGGC AAGTTGTCTCCTTTACCCCAGCCATCTAATAAAATCGGAAAAATGAAAAA TGGCACATGTTGTACGTCGCTGTGTATGGAAGACGAAGCAGGTTTGGTAT CGGGGCTACATCATTGTTTTGGGGGGTAAAGTTTGTCGGGCGGTTACCTT ATAGACACTTACCATTCGAATAACCCTAGATGTGTGTTTTTGTGCGTGCT TGTAGAATTGACAAAAGCTAAACCGTGGGGATCGAAAGTCCCCGATATTG TCGCCCCAAAGTTGGTGCCCTTGTAGTCAGCGCTGTTACCTGTCGGCCCG GTCTAAACGACCCACCGACTTTCCACCACGTTACTTTAACATACTCACTT CATACCAACAGTGGGTGTGGGAAAGAGAGGCGAATTTTAATTGGTCTCTA GCCGGTCGACCCCGGTCGCGCCGCGTTAAATCACCAGCCCTGGTGCAAGT AAGAAATGCACCAGCTCTGAAACGCCTCCAGAACTACACCAGAACTACAC CTTACAAGGTCTAGGTGCGTTCTGTATTTTCTTCAAAAAAAACCAATTTG CCTCCAAAACTACACCTTATTTTATAATTTATAAGGAATAAAATGCAAAA GTTCTCAGTCACAGCGTAATAGGCTAGTTGGTAAGATTACAGACATCGAT AAAGCCTCGAGGTTCAATCCCCAGTGTCGAAGCCTTTTTTTTATCTTACT TGAACCAAGCGCAAGCCATGAATTGGGACCTCGCAGTCAGCTGGGCTAGC GGGGTCTGGGTTAGGGTTAGCGATAGCGTTAGGATTTTTTATTTTTCGCA GACGGGGCATGAATTGACAATCCCCAGCTATGAATTGGGACCTCGCAGTC AGCTGGGCTAGGGGGGTTTGGGTTAGGGTTAGCGATAGCGTTAGGATTTT TTATTTTTCACAGACGGGGCATGAATGTACCCAGCCATGAATTTTCACGG GCATGAATTGGGACCTCGCAGTCAGCTAGGTGAATTGGGACCTCGCAGTC AGCTGGGCTAGGGGAGTCTGGGTTAGGGTTAGCGATAGCGTTAGGATTTT TTATTTTTCGCAGACGGCGCATGAATGGACCCAGCCATGAATTGGGACCT CGCAGTCAGCTAGGGTAGGGGGTCTGGGTTAGGGTTATGTGTAGATCTGG AGGCGTTCTCTCGCTGGTACATTTTAGAAATGCACCAGGGCTGGTGATTT AACGCGGGCTGGACCGGTCGCCCCGGTAGCTCAGTAGGCACCTCGTAACC CTCTGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTC ACTAAAAACAAAAAAAAAACAAAAAAAAATGCCCAACGGGTGGAGAACGA TTAATTCGTTAGTACACAAAATTCGACTTCACGATCGACGAGGGAAAGGA ATGGCTGAATCCTTCTCGCGACAAAAATCAAGGCACGCACCGCAGAAGGA AGGTGGATGAAAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGG TACGTCCAACGAACTTGATGTCCAGAATGGATGGGAAGAAAACACACAAA CACATGGTGACCTGCCAAGGCGGCACTCGTTCGGAACTACCTCGAGGTGT ACTGGTCCTGTGCCGGCGGACTCTCGGCAGTGAGCGCCTCGGGACTGACC CGATGGCGTGTGGCGGTTTTATATAAATAAATGGACACCGCCGCGGAACT CGGGAGGAATCCCGTAAGTAAACACCAGATTCAGCCTGAGTATGAAGAAT GGTCACGCTGACGCGGGACGGGACGGCTGAACCCGCCTGGCGAGACCAAA TTATCAGGCACGTACGGGGACAGGGGCATATTCATTTTCCCTGTTCAGCT GACCACGAGCACGATTGGCAACCTTACCCGCGGTTGATCCATACTCTGCT ATATGTGATGACCATACGTACACACATGCAAACTACGTTGGAGTCGTTTC CAAACGTGTTTAAAGAAAATCTGAACGCATCTAAACCTTCTGACCAGTCA AGAGATTTAGGTGGAAACATTGGCTGTAGGAAGAAAGACCTCTACATGGT AGTAAAAGAGTTCCCAGTGTTCTCATTTTACGCCATAAATACTTTCGGGG AACTGTAAGAACAGCTCACGCCACCACGAGGACCGATAAAAAATGTTCTC AACCTTGCATAGGCCCGGGCACTTCATCCGGCGGGCTCAACCTTCCAAAC ATGAACTCCAAGTTCCAGCCCGCTCATGGCGAACTACCCTTTAGAAATTG AGGAAAGGGCTTTCGGGGTTATGCCGCTCGACCTCAAACGAAGCTGCTCT ACTACATAATATTTTTTGTTATGAAGCTCGTGATCATACAAAATAGTTGA ACGTTGTAGATACATTCTAACATATAGTAATAGTAACAAAGGCCCGTAGC GAATTTCGGACAGCGGGGTACCGGTAGATCAGACGACGTGTTCGAACGTG AGCCTAGGAGGCTCATTTTCCAAAGTTGAGCATTCCAAAACTTTGGCAGT AGACAACAGCGAAAACCTTTTAAAGGGATACGCTCAGACTTTTTATTTTC AAGTGTTGAAATTGTGTTGACTGGTTTAGACCGGCCCTTGCCGGCGTCAG TCAATTTATTCCCCGAGCTTTATCTCTCTTGAGACCCACAATCCTGGTGG CATCGGCAGCGAGACCCCAGGGCCATAAGATTTAATTCCGTTTCATTCAC GATTCGCTTCCACCATGTTGGTTGCGGAGAGGATCACGACATCGAGGGTT ATCAGACCGCTCGGTTGATCTTTCGCTTTCTTTAAGCTGGTGATAAAAAC CCCGGAACTTTTCTTTAAACACCCTCAGTCAGCCGCTGACTAATGGAGTG TCAAAAATCAGTTTCATGACAAACTTGACAGACGTTGCGAATAGCGAACC AAGCGAGCCGCTGGCCATTTGTCCGCACAAACACTCGGAGCGAACCGCTG GAGCTGTGTTGTGTAAACACATGCCAAGCTTTCACAAGCTACAGTATTAC AGGATAGGAAACAAGGTCTTGGGGAGGTGGTTGGTCCTACAATAGAGCTA TATTCCAACCGTTTTTCTTGTCGTATATACCCTGCCTGATAAAATCCCCT GTACGCGATGCTTTTTTTTCTCGAGAACCTAGGCGATTCTCTACAACTTC GAAGAACTTCTTCCTTCATTCAAACGGTGGCAAAGACAGGGTAAAGCTGA CGTCGACTTTTTGCGAGGAGCTTTCGGAAACATGGTAGTACCGGTAAGAT CGAGGGCGAAGCTCCCCCGACCTACGAAAAAAGGAAAATGAACAACGTAT TTTGTGACATCGAAGCATGAGCGCATCTTGTGAGCAAGGGTGTAACGTTT CCAAGCCGGAACGAAGTGACGCAAGGGTTTTTTTATTTCGCCTGCCACGC TATCATTACCGACACAGAAAGGTAGAACGGTCTAGCTTCTTCGCATCGAG GACACACCCGTATTCAGGGCTGATATCGCGTTCAACCGACCGACTTAAGT ATGTCTTTGGAAGAGTCACTATTAATAACACGCCACGAGGTGCACTCATG ACCAAAGCTTCAATCGTATCAAAACTGTGTGCAATGTACTTGTTGCGTTT TACTCCTGGCGAGGCGCGCAGGTTGTCGAGTGCTCTTCTGAAGGATATGG AGAGGAACGACACATGTCCATGACTCTCCGTGAGTGGAGTATCCCGCAGG CGAATCTGGTTTCCCTCGATTGTCACTGTTGTCTTGGTTCCTTTCTCTTT TCTGGGGACGCTTACCGTGGTCGGCTGATCGTCTGATCGTCTTCCTCGTC TGTTGAACTCGTGGCACGACGAAGGCGCTCGTGATCCTGTGTTGGCGTGT GAGTTACCAGCAAAACACGTTTATCTGTCTTTCTGATACATGCTCGAGGA AGTCGAGTACCTAGACGCAGTTCACGGTGGCCGTCGAGACGGAGACGGCC ATAGCCCTCGGTCCGATGGCAGCCAGGAGGCCTCTGGCGGCGCCGTCCTC TACCTGAAAGACTGGCATTTTCAGAGACTACGACGAGACGGAGGGAGGGA TTCGGCCGACGGAGAAAGCGTGGAGACGCCCTTCTTCTTCGCGGACGACT GGCTCAATTGGTGGTGGGGACTATGTTGTAGTCGCTCCTCTAGTCTCCTC GAATGTGTGCTTACTTGGGGGTGGTCATTTGGGGCGATTGCTTGAGTCAA AACCGCCTGATGCCGAGCTACGGTTGATGCTGGGTTGATCATCAGTTGAT TAAACTGAAGTTGTCGTCGTGCCCCCCTGAATAATGGTGTCTGGGCGTCG TGATATGACACCATACATGCGCACGAGTAAACGACAAGAAACTAGGCGCG TTGCGGCCGACCTTCTGAAAGTGTCATCTAGTGACTCATCGACGAGCCAT GATGACGCAGTCCGACGGGTCGGGAGAAGGGGGATCTCATTCGCGCGGAG GATCACTAGAGCTACATTTGAAAGAACCGGTCGATAAAGATTCGTCGCTC TTCTTCGCTTCGCCCTCGTTTCGAGACGAAATATGTCGTCCCACTGCGTC CTGGTATAGGTGCGACGAGCAAGGTCAGAAAGACTACCGCTTCGTATACA TCGGGCCACGAGGTTCGTGGACCCCGCTCCACCACGACGTGCTCAACAGG CGAGGCAGCAATGAATCTGGATTGGCAACTACAATCCTCATAAAAAACAC GCAAGGCGTGTGTCCCTGTTGATCCATGTTTTTTTTAGGGGGGCATCTGC CGGATTCTCACCTTGAGGCTTAACCAGTTATGGGTCGTATCTCCGCTCTG CCGCTGTGTGCGATCGACCAGGCTTTCTGCCCTTGCGTTCTTATACTGCT AGGTAAACAGCGTATGGCTTGACAATTATCCTTGTGCGCAGTACCGTAAT TTTTTCCAGTCTCGCAACCCCGTCCTTCGCTTCGCTCGACCTCGCCGTGT TTAGCTACAGCTGGTCGTTCAATGTTTGCGGCGGCAAGCACTGGACACTG TTCCCGAAGGAGGCCTCGCCACTTCTGTATGACAGGTGATGAATCGTCTA ATGAAATCCTTGCTCAAGCTGGGTTTTTTTCCCCCCACCTCTACTGGTTG TAGTTTCGGTTATGTTAATTTTGCATTTACTGGAGTATTACTTTATTATT TATTGCTTTTTTTCTAACGCTGTCGACGACGAGAGTACAGCGTTCAGTTC AGCTGGAGCAGTTACGCCTTACTACTCATACATTTAAATATGTGTATAGT GCGGTACCGCTATCCCGATGAAATGTTTGTGCTTGCCCTTGTAGACATGG CCGAAACTTGGCCACAGATGTCCGCAAGGACGCCCTGGATCCCGAAAACT TCCCCGAGCTGGAGGGCGCACCCAGGCTCGAGGTTGTGCAGGCTCCAGGG GAAGCAATTTTTGTTCCTTCGGGATGGCACCATCAGGTGCTTGTATGGCC GTCAAATATTTTCCAGCTACCAAGTAATGTTGGACTTTGGTTTACTGCGG CACGACAAGGGTATGACAGTAGTGTTATCAAGCAGAAGTATTCTGTATCT GGCATGATTCTACATTATTATTTTTGATATAATATTAGTGTAAGGTTGCA TGCAAAATGATGTTTTTTACGGGGGAGTTTTGGCAAGCGCAGCAGCTCTT GAAAGTTATAACAAATTCCACACCCGTTGGGACGTAGTAACTGCATCATC GTTCGCCGAACTGCTCTGTATTCCTCGCAGTTTCTTGAATGTGGTTGACC AATGAAGTCGCGAATCTTTCATCTTTTCCCAACACCTTGATTTCTCTCAT CAAACGCTGGGACCGTTCGCAATGAACGATGGACTTTCAAACGCGCCGCG CACGCCAACCCGCAAGGTCGTTAACCTCGGAGACGGGGGGTTGCACGGCG GATTGACCATATCGGTCAACAACAACTGGTTCAACGGCTTCAGTTTGGAC AGCGTGCGGTCCTTTCTTTCTTCGGAACTCGTGGCCGTCAGAGCCGCCCT CGAACATCTCCGACGAGACATGTTAGGGGAAGGGGAGTGGGAGAGGCAGT GCGAGCTAGCCATGCGCACAAACAGCGGTCTCAACGTCACCGACTTCGCC AACATCGTCGTGGGCCGGGCGCATTATCTTCTATCCGGCGAGAAACGGGC GCGAGGAACGGGCGCGACGCTTGAGCGGACAGGGTGGGCATCGATCACGG GGGAGCCTGAGAACGACTTCCGTGAGAGTCGTGGCGACAGCGGTGGTGGT GATGGTGGCGATCGCAGGGTGTGGCACGATGAGCGATGGAAAGTGTTCGC CCTGGAGAAGATAGCGGCGGCGTTGCGAGATCTATCGACCGCACCTTTCG TTGACCACGTGTTCTTGGACGATGCCGGTCTAATCAATGACGCCGGTGTC GGCACGCCTGATGAGCACACCGATGACGGGCTGCGCAAAGATGCTCGCGC AGGAAGGAGAAGCGTTGGAGCAACGCTAGCGTGCGTTGAAAGGTACCTGC ACTGCAGTCCAGACACGGACGACAGGGAAGACTAGCCTGGCAAGGTCTAG GTTCGGCTCTCACCAGACCTTGAGCAATAAGATACGAATGAATTTCAATA ACACGTGCTGTAAGTCGTGTTGAATCAGAGAGCCTGGTGTTGCGGCTGAT GCGTACTTGTTGTTGATCCGAGAAGACGTACTGACGGCCATTGAATATTG CTGCCCGCAAGCGGTGGCAAACTGATCGATCGATATATGCTGTAATTGTT GAGCGATTGGCATATTGGTGAGCATATATATATTTCTACCGACG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig76:515297..522190+

>mRNA_F-serratus_M_contig76.18867.1 ID=mRNA_F-serratus_M_contig76.18867.1|Name=mRNA_F-serratus_M_contig76.18867.1|organism=Fucus serratus male|type=CDS|length=2760bp|location=Sequence derived from alignment at F-serratus_M_contig76:515297..522190+ (Fucus serratus male)
ATGACATCAAATCATCCGATGACATCAAATCATCCGGCGATTCTCTACAA
CTTCGAAGAACTTCTTCCTTCATTCAAACGGTGGCAAAGACAGGGTAAAG
CTGACGTCGACTTTTTGCGAGGAGCTTTCGGAAACATGGTAGTACCGGCG
ATTCTCTACAACTTCGAAGAACTTCTTCCTTCATTCAAACGGTGGCAAAG
ACAGGGTAAAGCTGACGTCGACTTTTTGCGAGGAGCTTTCGGAAACATGG
TAGTACCGGTTGTCGAGTGCTCTTCTGAAGGATATGGAGAGGAACGACAC
ATGTCCATGACTCTCCGTTGTCGAGTGCTCTTCTGAAGGATATGGAGAGG
AACGACACATGTCCATGACTCTCCTCGAGTACCTAGACGCAGTTCACGGT
GGCCGTCGAGACGGAGACGGCCATAGCCCTCGGTCCGATGGCAGCCAGGA
GGCCTCTGGCGGCGCCGTCCTCTACCTGAAAGACTGGCATTTTCAGAGAC
TACGACGAGACGGAGGGAGGGATTCGGCCGACGGAGAAAGCGTGGAGACG
CCCTTCTTCTTCGCGGACGACTGGCTCAATTGGTGTCGAGTACCTAGACG
CAGTTCACGGTGGCCGTCGAGACGGAGACGGCCATAGCCCTCGGTCCGAT
GGCAGCCAGGAGGCCTCTGGCGGCGCCGTCCTCTACCTGAAAGACTGGCA
TTTTCAGAGACTACGACGAGACGGAGGGAGGGATTCGGCCGACGGAGAAA
GCGTGGAGACGCCCTTCTTCTTCGCGGACGACTGGCTCAATTGGTGGTGC
GACGAGCAAGGTCAGAAAGACTACCGCTTCGTATACATCGGGCCACGAGG
TTCGTGGACCCCGCTCCACCACGACGTGCGACGAGCAAGGTCAGAAAGAC
TACCGCTTCGTATACATCGGGCCACGAGGTTCGTGGACCCCGCTCCACCA
CGACTACCGTAATTTTTTCCATACCGTAATTTTTTCCACTGGTCGTTCAA
TGTTTGCGGCGGCAAGCACTGGACACTGTTCCCGAAGGAGGCCTCGCCAC
TTCTGTATGACAGCTGGTCGTTCAATGTTTGCGGCGGCAAGCACTGGACA
CTGTTCCCGAAGGAGGCCTCGCCACTTCTGTATGACAGACATGGCCGAAA
CTTGGCCACAGATGTCCGCAAGGACGCCCTGGATCCCGAAAACTTCCCCG
AGCTGGAGGGCGCACCCAGGCTCGAGGTTGTGCAGGCTCCAGGGGAAGCA
ATTTTTGTTCCTTCGGGATGGCACCATCAGACATGGCCGAAACTTGGCCA
CAGATGTCCGCAAGGACGCCCTGGATCCCGAAAACTTCCCCGAGCTGGAG
GGCGCACCCAGGCTCGAGGTTGTGCAGGCTCCAGGGGAAGCAATTTTTGT
TCCTTCGGGATGGCACCATCAGGTCGTTAACCTCGGAGACGGGGGGTTGC
ACGGCGGATTGACCATATCGGTCAACAACAACTGGTTCAACGGCTTCAGT
TTGGACAGCGTGCGGTCCTTTCTTTCTTCGGAACTCGTGGCCGTCAGAGC
CGCCCTCGAACATCTCCGACGAGACATGTTAGGGGAAGGGGAGTGGGAGA
GGCAGTGCGAGCTAGCCATGCGCACAAACAGCGGTCTCAACGTCACCGAC
TTCGCCAACATCGTCGTGGGCCGGGCGCATTATCTTCTATCCGGCGAGAA
ACGGGCGCGAGGAACGGGCGCGACGCTTGAGCGGACAGGGTGGGCATCGA
TCACGGGGGAGCCTGAGAACGACTTCCGTGAGAGTCGTGGCGACAGCGGT
GGTGGTGATGGTGGCGATCGCAGGGTGTGGCACGATGAGCGATGGAAAGT
GTTCGCCCTGGAGAAGATAGCGGCGGCGTTGCGAGATCTATCGACCGCAC
CTTTCGTTGACCACGTGTTCTTGGACGATGCCGGTCTAATCAATGACGCC
GGTGTCGGCACGCCTGATGAGCACACCGATGACGGGCTGCGCAAAGATGC
TCGCGCAGGAAGGAGAAGCGTTGGAGCAACGCTAGCGTGCGTTGAAAGGT
ACCTGCACTGCAGTCCAGACACGGACGACAGGGAAGACTAGGTCGTTAAC
CTCGGAGACGGGGGGTTGCACGGCGGATTGACCATATCGGTCAACAACAA
CTGGTTCAACGGCTTCAGTTTGGACAGCGTGCGGTCCTTTCTTTCTTCGG
AACTCGTGGCCGTCAGAGCCGCCCTCGAACATCTCCGACGAGACATGTTA
GGGGAAGGGGAGTGGGAGAGGCAGTGCGAGCTAGCCATGCGCACAAACAG
CGGTCTCAACGTCACCGACTTCGCCAACATCGTCGTGGGCCGGGCGCATT
ATCTTCTATCCGGCGAGAAACGGGCGCGAGGAACGGGCGCGACGCTTGAG
CGGACAGGGTGGGCATCGATCACGGGGGAGCCTGAGAACGACTTCCGTGA
GAGTCGTGGCGACAGCGGTGGTGGTGATGGTGGCGATCGCAGGGTGTGGC
ACGATGAGCGATGGAAAGTGTTCGCCCTGGAGAAGATAGCGGCGGCGTTG
CGAGATCTATCGACCGCACCTTTCGTTGACCACGTGTTCTTGGACGATGC
CGGTCTAATCAATGACGCCGGTGTCGGCACGCCTGATGAGCACACCGATG
ACGGGCTGCGCAAAGATGCTCGCGCAGGAAGGAGAAGCGTTGGAGCAACG
CTAGCGTGCGTTGAAAGGTACCTGCACTGCAGTCCAGACACGGACGACAG
GGAAGACTAG
back to top