mRNA_F-serratus_M_contig76.18863.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI) HSP 1 Score: 289 bits (740), Expect = 4.760e-89 Identity = 178/321 (55.45%), Postives = 208/321 (64.80%), Query Frame = 1
Query: 1 GSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVT-LDPPSCGKGDAYPEEFWNCADIKITVGGSSTYGGSTSSDDGSTLAPVSEPETP----APVTPSAVXXXXXXXXXXXXXXXXXXXXXXXXXKDVLDDDDHDDDEDCADPVSAYEQCGGSGWTGSMCCCPGYECNLVDEFYHQCQLASHGDDGCSYLW 948
GSN YG+EN NYPVL TY EG ++++K+VV+TYHWGH+E F+CD+DD+ DG D +VTQSCFN YPL RA DD SPID + GR+ LDPPCR ETDQ G+ AG V T R+QLP G+TC+RC+VQMVYYTGNSC GY F P S PS CAPS +DW+ + CG GDAYPEEFWNCAD+ IT SD G ETP A XXXXXXXXXXXXXXXXXXXXXXXXX D DC DPV A+ QCGG+G+ GS CC GYEC + + Y +C+ DGCS W
Sbjct: 62 GSNRYGQENSNYPVLETYAEGGILEVKIVVATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPEEFWNCADVSIT------------SDGGPXXXXXXXXETPKETKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTDPDCEDPVDAFAQCGGAGYDGSTCCTAGYECEEMADCYSECRPRG---DGCSESW 367
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 282 bits (722), Expect = 1.360e-86 Identity = 146/316 (46.20%), Postives = 175/316 (55.38%), Query Frame = 1
Query: 1 GSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVTLDPPSCGKGDAYPEEFWNCADIKITVGGSSTYGGSTSSDDGSTLAPVSEPETPAPVTPSAVXXXXXXXXXXXXXXXXXXXXXXXXXKDVLDDDDHDDDEDCADPVSAYEQCGGSGWTGSMCCCPGYECNLVDEFYHQCQLASHGDDGCSYLW 948
G+N Y NG++P+L TYQEG V+++K+ ++ YHWGH+EFFIC++D+M D DG+ Q CFN YPLTRA D + SPID N+PGRYY+DP CR ETDQTKP G+ GYV+ YQLP GLTCDRCI+QM YYTGNSC GYE F P S PS CAP DW+ LD CG+ +YPEEFW CAD IT G + TPAP P A DC DPV Y+QCGG + GS CC GYEC + Y QC+ GCS W
Sbjct: 90 GANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMED-PDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAITPDGMAN-------------------PTPAPTEPLA---------------------------------------DCLDPVGPYDQCGGEDYEGSDCCREGYECTEMASCYSQCRPIP---GGCSEDW 343
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 273 bits (698), Expect = 1.660e-81 Identity = 176/371 (47.44%), Postives = 206/371 (55.53%), Query Frame = 1
Query: 1 GSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVTLDPPSCGKGDAYPEEFWNCADIKITV-GGSSTYGGSTSSDDGSTLAPVSEPETPAP------------------------VTPSAVXXXXXXXXXXXXXXXXXXXXXXXXXKDVLDDDDH------------------------------DDDEDCADPVSAYEQCGGSGWTGSMCCCPGYECNLVDEFYHQCQLASHGDDGCSYLW 948
GSN YG+EN NYPVL TY EG ++++K+VVSTYHWGH+E F+CD+DD+ DG D +VTQSCFN YPL RA DD PID + GR+ LDPPCR ETDQ G+ AG V T R+QLP G+TC+RC+VQM YYTGNSC GY F P S PS CAPS +DW+ CG GDAYPEEFWNCAD+ IT GG APV E P+P +TPS XXXXXXXXXXXXXXXXXXXXX D DC DPV A+ QCGG+G+ GS CC GYEC + + Y +C+ D CS W
Sbjct: 111 GSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGPXXXXXXXPETPQKPEAPVDEATEPSPAPTAVVEEYXXXXXXXXXXXHEEPMTPSPTTAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSTDPDCEDPVGAFAQCGGAGYDGSTCCRAGYECEKMADCYSECRPRG---DRCSEGW 478
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 266 bits (679), Expect = 2.260e-78 Identity = 121/192 (63.02%), Postives = 139/192 (72.40%), Query Frame = 1
Query: 1 GSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVTLDPPSCGKGDAYPEEFWNCADIKITVGG 576
G N YGREN NYPVL TY EG V+++K++VSTYHWGH+E F+CD+ D+ +GED +VTQSCFN YPL RA DD PID + GR+ LDPPCR ETDQ G+ G V T RYQLP G+ CDRC+VQMVYYTGNSC GY F PES PS CAPS +DW+ CG GDAYPEEFWNCADI IT G
Sbjct: 118 GDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDG 309
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 258 bits (660), Expect = 9.300e-74 Identity = 125/220 (56.82%), Postives = 147/220 (66.82%), Query Frame = 1
Query: 4 SNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVTLDPPSCGKGDAYPEEFWNCADIKITVGGSSTYGGSTSSDDGSTLAPVSEPETPAPVT 663
SN YG EN NYPVL TY EG +++ K+VVSTYHWGH+E F+CD+DD+ G D VTQSCFN +PL R DD SPID ++ GR+ LDPPCR ETDQ G+ G V T R++LP GLTC+RC+VQMVYYTGNSC GY F PES PS CAP+ +DW+ CG GDAYPEEFWNCADI IT G +T T AP + ET P T
Sbjct: 114 SNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADISITSDGDPAPSPTTVL----TPAPTAPEETEPPAT 329
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 244 bits (623), Expect = 2.160e-72 Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 1
Query: 4 SNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVTLDPPSCGKGDAYPEEFWNCADIKITVGG 576
SN YG+EN NYPV TY EG ++++K+VVSTYHWGH+E F+C++ ++ G D VTQSCFN +PL RA DD P D ++ GR+ LDPPCR ETDQ G+ V T R++LP GL+C+RC+VQMVYYTGNSC GY F P S PS CAPS +DW+ CG GDAYPEEFWNCADI IT G
Sbjct: 115 SNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDG 305
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 246 bits (628), Expect = 1.490e-71 Identity = 112/192 (58.33%), Postives = 135/192 (70.31%), Query Frame = 1
Query: 1 GSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVTLDPPSCGKGDAYPEEFWNCADIKITVGG 576
GSN YG+EN YPVL TY EG ++++K+VVSTYHWGH+E F+CD+DD+ DG D +VTQSCFN +PL RA DD PID + GR+ LDPPCR ETDQ G+ G V T R+QLP G+TC+RC+VQM Y+ NSC GY F P S P CAPS +DW+ CG GDAYPEEFWNCAD+ IT G
Sbjct: 82 GSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVSITSDG 271
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 252 bits (644), Expect = 3.760e-70 Identity = 114/192 (59.38%), Postives = 138/192 (71.88%), Query Frame = 1
Query: 1 GSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVTLDPPSCGKGDAYPEEFWNCADIKITVGG 576
GSN YG EN NYPVL TY EG +++ K+VVSTYHWGH+E F+CD++D+ G D VTQSCFN +PL R DD SPID ++ GR+ LDPPCR ETDQ G+ G V T R++LP G++C+RC+VQMVYYTGNSC GY F P+S PS CAP+ +DW+ CG GDAYPEEFWNCADI IT G
Sbjct: 113 GSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADISITSDG 304
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 242 bits (617), Expect = 1.810e-69 Identity = 145/288 (50.35%), Postives = 170/288 (59.03%), Query Frame = 1
Query: 106 GHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVTLDPPSCGKGDAYPEEFWNCADIKITVGGSSTYGG-----STSSDDGSTLAPVSEPETPAPVTPSAVXXXXXXXXXXXXXXXXXXXXXXXXXKDVLDDDDHDDDEDCADPVSAYEQCGGS-GWTGSMCCCPGYECNLVDEFYHQCQLA-SHGDDGCSYLW 948
GHLEFFIC+++DM+D DG+VTQ CFNM+PL RA DDGDASPID +H GRYYLDPPCR ETDQ G+ G V T RY+LP+GLTC RCI+QMVYYTGN+C PGY+ F P SVP GCAP+ DWV CG+ YPEEFWNCADI+IT S GG + S D L+P EP P P XXXXXXXXXXX C DP YEQCGG + G CC EC + + Y +C+ A + +D CS W
Sbjct: 214 GHLEFFICNAEDMSD-PDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEIT---SDEDGGGPAPTTPSPTDEEELSPTPEPSVPTVELPRTPXXXXXXXXXXXSGMESTPVPSVAPASPTA--------TSCDDPAEVYEQCGGDDSYDGRTCCVENSECVELADCYSECRPAETTPEDNCSGEW 489
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 225 bits (573), Expect = 2.040e-63 Identity = 105/193 (54.40%), Postives = 134/193 (69.43%), Query Frame = 1
Query: 1 GSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDASPIDLNHPGRYYLDPPCRVDETDQTKPTGSAAGYVVTGRYQLPAGLTCDRCIVQMVYYTGNSCTQPGYEFFAPESVPSGCAPSASDWVTLDPPSCGKGDAYPEEFWNCADIKITVGGS 579
G+N Y N N+ L ++ G V++M +V++ YHWGH EFF+C++DDM D DG+ TQ CFNM+PLTRA DDGDASPID N+PGRYY+DP CR +ET+Q+ + S GY + RY LP + C+ CI+QMVYYTGN+C GYE F P S PS CAP+ DW+ LD CG YPEEFW C+D +T GS
Sbjct: 119 GTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDM-DDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQS--SNSIEGYNIKMRYVLP-DIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDGS 307 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig76.18863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig76.18863.1 >prot_F-serratus_M_contig76.18863.1 ID=prot_F-serratus_M_contig76.18863.1|Name=mRNA_F-serratus_M_contig76.18863.1|organism=Fucus serratus male|type=polypeptide|length=327bp MKVVVSTYHWGHLEFFICDSDDMADGEDGLVTQSCFNMYPLTRATDDGDAback to top mRNA from alignment at F-serratus_M_contig76:403693..406777+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig76.18863.1 ID=mRNA_F-serratus_M_contig76.18863.1|Name=mRNA_F-serratus_M_contig76.18863.1|organism=Fucus serratus male|type=mRNA|length=3085bp|location=Sequence derived from alignment at F-serratus_M_contig76:403693..406777+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig76:403693..406777+ >mRNA_F-serratus_M_contig76.18863.1 ID=mRNA_F-serratus_M_contig76.18863.1|Name=mRNA_F-serratus_M_contig76.18863.1|organism=Fucus serratus male|type=CDS|length=1962bp|location=Sequence derived from alignment at F-serratus_M_contig76:403693..406777+ (Fucus serratus male)back to top |