mRNA_F-serratus_M_contig76.18862.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 175 bits (444), Expect = 7.880e-50 Identity = 82/138 (59.42%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 1 GHVYLMEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGGAWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQPP-KGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHWV 411
GHVYLM P SRNF+ TD FQ + I CPHC QSRGP AVR R E NT VL+ YG G WP +YER E+ NGN+ E ++ISVRHGICGDPEQ +G+N YG+EN YPV Y EG +I++K+VVSTYHWV
Sbjct: 6 GHVYLMVPVSRNFWATDAFQESSYSDINWCPHCFQSRGPSAVRERGEENTEEAVLAMYGRGEWPHLFSYERNEVHGNGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWV 143
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 142 bits (357), Expect = 2.760e-37 Identity = 69/137 (50.36%), Postives = 87/137 (63.50%), Query Frame = 1
Query: 1 GHVYLMEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGGAWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQPP-KGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHW 408
GHVY+M P SR + T+ FQ I CPHC QSRGP A+RAR G WP + GE A NGN++E D+++ RHG+CGDPEQ +GSN YG+EN NYPVL TY EG ++++K+VVSTYHW
Sbjct: 25 GHVYMMNPVSRQLWGTEAFQEPGSPDINYCPHCFQSRGPAAIRARG------------GDQPWP----HFNGERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHW 145
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 139 bits (351), Expect = 3.080e-37 Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 1
Query: 70 FEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGGAWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQ-PPKGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHW 408
FE + CP C +RGP V+ R NT VL+EYG G WPL+ AYE+GE+A+NGN+LE+D+I+ RHGICGDPEQ +G+N Y NG++P+L TYQEG V+++K+ ++ YHW
Sbjct: 11 FERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHW 124
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 140 bits (353), Expect = 6.170e-36 Identity = 67/138 (48.55%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 1 GHVYLMEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGG-AWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQ-PPKGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHW 408
GH+ M P SR + Y VF+ WDF I CPHC +RGP V+ RA+A T VL+EYGGG +PL G+ ADNGN+LE D+I+ RHGICGDPEQ +GSN Y N + VL +++ G V++M ++++ YHW
Sbjct: 24 GHIMQMYPISRQYSYGPVFKEWDFPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYF----GDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLGSFKSGEVLEMDIIMNAYHW 157
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 134 bits (338), Expect = 1.250e-35 Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 1 GHVYLMEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGGAWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQPP-KGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHW 408
HVY+M P SR + T FQ+ I CPHC QSRGP AVRAR G WP + GE A+NGN++E ++++ RHGICGDPEQ + SN YG+EN NYPV TY EG ++++K+VVSTYHW
Sbjct: 28 SHVYMMTPVSRQLWGTSAFQDAGSPDINYCPHCFQSRGPAAVRARG------------GDKPWP----HFNGERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHW 148
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 138 bits (347), Expect = 3.910e-35 Identity = 66/138 (47.83%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 1 GHVYLMEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGG-AWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQ-PPKGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHW 408
GH+ M P SR + Y VF+ WDF I CPHC +RGP V+ RA+A T VL+EYGGG +PL G+ ADNGN+LE D+I+ RHGICGDPEQ +GSN Y N + VL +++ G V+++ ++++ YHW
Sbjct: 24 GHIMQMYPISRQYSYGPVFKEWDFPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYF----GDFADNGNYLETDEIAKRHGICGDPEQNADEGSNVYSTANIGWDVLDSFKSGEVLEIDIIMNAYHW 157
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: D7G892_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G892_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.390e-33 Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 1 GHVYLMEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGGAWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQ-PPKGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTY 402
G Y++ P SR ++ VFQ+ E CP CL S GP V+ + T +L+EYG G WPL AY +GE+ DNGNF ERD+IS RHGICGDP+Q + +NAY ++ L T +EG V+ +KVVV+ Y
Sbjct: 21 GGTYVLTPTSRPVLHSAVFQSETAEKFEDCPGCLDSGGPVYVKEKGIGYTNGGLLAEYGDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFALESTNAYSSSLSDWSALETLKEGGVLDIKVVVAEY 155
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 131 bits (330), Expect = 6.650e-33 Identity = 66/137 (48.18%), Postives = 82/137 (59.85%), Query Frame = 1
Query: 1 GHVYLMEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGGAWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQPP-KGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHW 408
H Y+M P SR + T FQ I CPHC QSRGP A+RAR G WP + GE A+NGN++E ++++ RHGICGDPEQ + SN YG EN NYPVL TY EG +++ K+VVSTYHW
Sbjct: 27 SHAYMMIPVSRQLWGTSAFQEVGSPDINYCPHCFQSRGPAAIRARG------------GDKPWP----HFNGERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHW 147
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 129 bits (323), Expect = 6.550e-32 Identity = 66/137 (48.18%), Postives = 81/137 (59.12%), Query Frame = 1
Query: 1 GHVYLMEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGGAWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQPP-KGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTYHW 408
H Y+M P SR + T FQ I CPHC QSRG AVRAR G WP + G+ A NGN++E ++++ RHGICGDPEQ +GSN YG EN NYPVL TY EG +++ K+VVSTYHW
Sbjct: 27 SHAYMMIPVSRQLWGTTAFQEAGSPNINYCPHCFQSRGAAAVRARG------------GDQPWP----HFNGDRAANGNYIESEEVAQRHGICGDPEQTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHW 147
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE) HSP 1 Score: 123 bits (309), Expect = 2.500e-30 Identity = 61/133 (45.86%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 7 VYLMEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLSEYGGGAWPLKIAYERGELADNGNFLERDDISVRHGICGDPEQ-PPKGSNAYGRENGNYPVLATYQEGSVIKMKVVVSTY 402
Y++ P SR ++ VFQ+ E CP CL S GP V+ + T +L+EYG G WPL AY +GE+ DNGNF ERD+IS RHGICGDP+Q + +NAY ++ L T +EG V+ +KVVV+ Y
Sbjct: 23 TYVLTPTSRPVLHSAVFQSETAEKFEDCPGCLNSGGPVYVKEKGIGYTNGGLLAEYGDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFSLESTNAYSSSLSDWSALETLKEGGVLDIKVVVAEY 155 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig76.18862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig76.18862.1 >prot_F-serratus_M_contig76.18862.1 ID=prot_F-serratus_M_contig76.18862.1|Name=mRNA_F-serratus_M_contig76.18862.1|organism=Fucus serratus male|type=polypeptide|length=133bp MEPYSRNFYYTDVFQNWDFEYITSCPHCLQSRGPGAVRARAEANTPADVLback to top mRNA from alignment at F-serratus_M_contig76:402894..403803+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig76.18862.1 ID=mRNA_F-serratus_M_contig76.18862.1|Name=mRNA_F-serratus_M_contig76.18862.1|organism=Fucus serratus male|type=mRNA|length=910bp|location=Sequence derived from alignment at F-serratus_M_contig76:402894..403803+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig76:402894..403803+ >mRNA_F-serratus_M_contig76.18862.1 ID=mRNA_F-serratus_M_contig76.18862.1|Name=mRNA_F-serratus_M_contig76.18862.1|organism=Fucus serratus male|type=CDS|length=798bp|location=Sequence derived from alignment at F-serratus_M_contig76:402894..403803+ (Fucus serratus male)back to top |