mRNA_F-serratus_M_contig7598.18845.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 283 bits (724), Expect = 6.720e-89 Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 2
Query: 2 RNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG 421
RNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFP LAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG
Sbjct: 457 RNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG 596
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 233 bits (595), Expect = 2.140e-74 Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 2
Query: 86 LERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG 421
++RFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG
Sbjct: 87 IDRFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG 198
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 222 bits (566), Expect = 4.540e-71 Identity = 103/121 (85.12%), Postives = 111/121 (91.74%), Query Frame = 2
Query: 59 VLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG 421
VLMQ VSQE+ER+ +LY+TAEELDTRE+LPWWR TGRK FPYLAPVAQQV GNQAGAAQVERDFS CANLLTRNRSR+DTYWVEMVMFLH N++ IP FKDIPMIAAKDI TCLPPRFNGG
Sbjct: 3 VLMQHVSQEIERYHSLYITAEELDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNGG 123
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE) HSP 1 Score: 204 bits (520), Expect = 1.040e-61 Identity = 109/140 (77.86%), Postives = 111/140 (79.29%), Query Frame = 2
Query: 2 RNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG 421
+NRVRGDT+DVGEGDSEDKVLMQQVSQELERFQALYMTA E VLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYK IPAFKDIPMIAAKDIRTCLPPRFNGG
Sbjct: 187 KNRVRGDTKDVGEGDSEDKVLMQQVSQELERFQALYMTAGE---------------------------VLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIRTCLPPRFNGG 299
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 175 bits (444), Expect = 4.140e-53 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 2
Query: 173 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG 421
MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG
Sbjct: 1 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG 83
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.980e-50 Identity = 82/139 (58.99%), Postives = 107/139 (76.98%), Query Frame = 2
Query: 2 RNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG 418
R R T+D+ + DSED+ L + V+ ELE +++L++ A+ELD REVLPWW+ TG+ +FP+LAPVAQQV GNQA +QVERDFS LL NRSR+DTYWVE+VMFL+ N+ IP K IPM+AAK+IR+CLP RF+G
Sbjct: 146 RGDARSSTDDMADEDSEDRKLGEVVAGELEHYKSLFIKADELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARFHG 284
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 134 bits (336), Expect = 2.500e-32 Identity = 67/137 (48.91%), Postives = 90/137 (65.69%), Query Frame = 2
Query: 8 RVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG 418
R G E+ +GD+ + Q+V+ E+ R++ ++MT+ +L EVL +W TGR FP L VAQQ G+Q AA VERDFS C L NRSR++ YWVEMVMFL+ N+K IP + +IP I +KDIR CLP +F G
Sbjct: 692 RSVGGVEESKQGDA----VEQEVANEIMRYKGVFMTSNDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKG 824
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5JN28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN28_9PHAE) HSP 1 Score: 125 bits (313), Expect = 6.620e-32 Identity = 67/116 (57.76%), Postives = 73/116 (62.93%), Query Frame = 2
Query: 74 VSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGG 421
VSQE+ER+ LY+TAEE R A VERDFS CANLLTRNRSR+DTYWVEMVMFLH N++ IP FKDIPMIAAKDI TCLPPRFN G
Sbjct: 112 VSQEIERYHLLYITAEEGYER-------------------------------AAVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNRG 196
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5JB56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB56_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.600e-30 Identity = 68/139 (48.92%), Postives = 88/139 (63.31%), Query Frame = 2
Query: 2 RNRVRGDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG 418
R +VRGDTED +G++ED+VL+QQV+ ELER+QAL++ AEE VERDFS CA+LLTR+RSR+DTYWVEM+MFLH N+K +P FK+IP+I +K+IR LP RF G
Sbjct: 1160 RTKVRGDTEDGSDGNAEDQVLVQQVTGELERYQALFVKAEE-------------------------------------VERDFSKCADLLTRHRSRVDTYWVEMIMFLHANFKHVPDFKEIPVIESKNIRKALPARFTG 1261
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 121 bits (303), Expect = 2.640e-28 Identity = 64/134 (47.76%), Postives = 86/134 (64.18%), Query Frame = 2
Query: 17 GDTEDVGEGDSEDKVLMQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNG 418
G E G GD D V+ E++R +AL M + +L R+VL +W+ +GR FP L VAQQ G+QA AAQ+ERDFS+ L NR+R+D YWVEMV+FL N++ IP + DIP + +K IR CLP +F G
Sbjct: 350 GAVEQSGSGDDGDL----SVAGEIQRSRALQMNSSDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKG 479 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7598.18845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7598.18845.1 >prot_F-serratus_M_contig7598.18845.1 ID=prot_F-serratus_M_contig7598.18845.1|Name=mRNA_F-serratus_M_contig7598.18845.1|organism=Fucus serratus male|type=polypeptide|length=132bp MQQVSQELERFQALYMTAEELDTREVLPWWRNTGRKMFPYLAPVAQQVLGback to top mRNA from alignment at F-serratus_M_contig7598:3848..4770- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7598.18845.1 ID=mRNA_F-serratus_M_contig7598.18845.1|Name=mRNA_F-serratus_M_contig7598.18845.1|organism=Fucus serratus male|type=mRNA|length=923bp|location=Sequence derived from alignment at F-serratus_M_contig7598:3848..4770- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7598:3848..4770- >mRNA_F-serratus_M_contig7598.18845.1 ID=mRNA_F-serratus_M_contig7598.18845.1|Name=mRNA_F-serratus_M_contig7598.18845.1|organism=Fucus serratus male|type=CDS|length=792bp|location=Sequence derived from alignment at F-serratus_M_contig7598:3848..4770- (Fucus serratus male)back to top |