prot_F-serratus_M_contig7582.18837.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7582.18837.1
Unique Nameprot_F-serratus_M_contig7582.18837.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length102
Homology
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: D8LC11_ECTSI (COX assembly mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC11_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 4.050e-44
Identity = 73/97 (75.26%), Postives = 87/97 (89.69%), Query Frame = 0
Query:    1 MATVGDGGRNDRLSWSKRAEQRLQDELKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTNKESFERYKLDREMELYRASLEEKS 97
            MAT+ DGGRNDRLSWSKRAE RL++ELKEIALK+CD SVAKFAACA+EKGMLVVFSCR+Q+ LMN CL+QHTN+ESF+RYK +RE+EL+R +   KS
Sbjct:    1 MATLKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMLVVFSCREQNALMNSCLNQHTNEESFDRYKFEREIELHRETQAAKS 97          
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: A0A7S2US42_9STRA (COX assembly mitochondrial protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US42_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.120e-22
Identity = 43/80 (53.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    9 RNDRLSWSKRAEQRLQDELKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTNKESFERYKLDREMEL 88
            RN RLSWS +A+ RLQ EL E+AL+KC   V  FA C+K+ G LV++SCR+Q++ MNECLH +T++E  E Y+ +RE +L
Sbjct:    8 RNSRLSWSNQAQYRLQQELNEVALQKCADQVKAFADCSKDSGFLVIWSCREQNKAMNECLHSYTSQECLEAYQREREQQL 87          
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: A0A8K1C5Z8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Z8_PYTOL)

HSP 1 Score: 92.0 bits (227), Expect = 3.090e-22
Identity = 42/80 (52.50%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    9 RNDRLSWSKRAEQRLQDELKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTNKESFERYKLDREMEL 88
            R+ RLSWS +AE +L+ EL +IA+ KC  +  KFA CA+E G++V+F CR+Q++ MN+CLHQ+TN E F  YK  RE E+
Sbjct:   15 RSSRLSWSNQAEHKLRQELNDIAIAKCRDTTEKFAVCARESGLMVIFRCREQNKAMNDCLHQYTNDEQFRVYKEKREKEI 94          
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: A0A6G0WRQ8_9STRA (COX assembly mitochondrial protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRQ8_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.170e-20
Identity = 40/80 (50.00%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    9 RNDRLSWSKRAEQRLQDELKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTNKESFERYKLDREMEL 88
            R++RL WS +AE +L+ EL  IAL+KC    + F  C+KE GM+VVF CR+Q+R++NECLHQ+TNKE+ E  + ++  E+
Sbjct:   19 RSERLQWSNQAENKLKQELNAIALQKCREYTSAFVECSKENGMMVVFKCREQNRVLNECLHQYTNKEALEALRAEKLNEI 98          
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: A0A485L188_9STRA (COX assembly mitochondrial protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L188_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.180e-18
Identity = 38/80 (47.50%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    9 RNDRLSWSKRAEQRLQDELKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTNKESFERYKLDREMEL 88
            R  RL+WS +AE +++ EL  IAL  C    A F  C+KE GM+VVF CR+Q+R++NECLH++T+KE+ E  K ++  E+
Sbjct:   19 RTGRLTWSNQAENKVKQELNAIALANCRDKTAAFVECSKEHGMMVVFKCREQNRILNECLHEYTSKEALEALKANKMNEI 98          
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: UPI0009F62553 (uncharacterized protein DDB_G0275933 n=2 Tax=Epidendroideae TaxID=158332 RepID=UPI0009F62553)

HSP 1 Score: 63.5 bits (153), Expect = 3.890e-11
Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 0
Query:   17 KRAEQRLQDELKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTNKESFERYK 81
            K+ E+ L+ ++K+ ALK+CD  VAK+A CA  + + VV+ CR+Q++L+NECLH +TN    E  K
Sbjct:   14 KKVEEALRSKMKQKALKECDHYVAKYAECASGRTLSVVWLCRKQAKLLNECLHDYTNDSVLEEMK 78          
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: A0A7S0ENB6_9CRYP (COX assembly mitochondrial protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ENB6_9CRYP)

HSP 1 Score: 60.5 bits (145), Expect = 9.220e-10
Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = 0
Query:    2 ATVGDGGRNDRLSWSKRAEQRLQDELKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTNKESFERYKLDREME 87
            A   D  R  RL  +   E+R+ D +K  A+  C   + +FA+C K  G+ V+F+CR Q+ +MNEC+ +H  +E  ++ +  RE E
Sbjct:   11 ARKDDSNRESRLRKTFPEEKRIADIVKSDAVAACKKEIEEFASCEKANGLFVIFNCRLQNEMMNECMKRHMTQEDHDKVRSKREQE 96          
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: A0A7S2RG50_9STRA (COX assembly mitochondrial protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RG50_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 9.670e-10
Identity = 23/70 (32.86%), Postives = 48/70 (68.57%), Query Frame = 0
Query:   15 WSKRAEQRLQDELKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTNKESFERYKLDR 84
            WSK A+++++ +    + + CD  V  F  C+KE G++V+F CR+++++MNEC+  +T  E +E+++ ++
Sbjct:   13 WSKAADEKIRKQFLAESRRICDDKVRAFVDCSKENGLMVIFRCREENKIMNECVQNYTTDEKWEQFRKEK 82          
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: UPI001E69030B (uncharacterized protein DDB_G0275933 n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E69030B)

HSP 1 Score: 55.5 bits (132), Expect = 6.570e-8
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   17 KRAEQRLQDELKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTNKESFERYK 81
            K+ E+ L+ ++K  ALK+CD    K+A CA  + + VV+ CR Q++++N CLHQ TN    E  K
Sbjct:   14 KKVEEALRSKMKVKALKECDEYTKKYAECALGRTLSVVWKCRGQAKVLNNCLHQFTNDSVLEEMK 78          
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Match: A0A2N9GGN0_FAGSY (COX assembly mitochondrial protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GGN0_FAGSY)

HSP 1 Score: 53.9 bits (128), Expect = 1.530e-7
Identity = 23/47 (48.94%), Postives = 36/47 (76.60%), Query Frame = 0
Query:   27 LKEIALKKCDASVAKFAACAKEKGMLVVFSCRQQSRLMNECLHQHTN 73
            +K+ ALK+CD  V+K+A CA  +   VV+ CR+Q++++N CLHQ+TN
Sbjct:    1 MKQKALKECDQYVSKYAQCASGRTFSVVWVCRKQAKVLNNCLHQYTN 47          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7582.18837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LC11_ECTSI4.050e-4475.26COX assembly mitochondrial protein n=2 Tax=Ectocar... [more]
A0A7S2US42_9STRA2.120e-2253.75COX assembly mitochondrial protein n=1 Tax=Fibroca... [more]
A0A8K1C5Z8_PYTOL3.090e-2252.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0WRQ8_9STRA3.170e-2050.00COX assembly mitochondrial protein n=1 Tax=Aphanom... [more]
A0A485L188_9STRA4.180e-1847.50COX assembly mitochondrial protein n=1 Tax=Aphanom... [more]
UPI0009F625533.890e-1146.15uncharacterized protein DDB_G0275933 n=2 Tax=Epide... [more]
A0A7S0ENB6_9CRYP9.220e-1034.88COX assembly mitochondrial protein n=1 Tax=Hanusia... [more]
A0A7S2RG50_9STRA9.670e-1032.86COX assembly mitochondrial protein n=1 Tax=labyrin... [more]
UPI001E69030B6.570e-841.54uncharacterized protein DDB_G0275933 n=1 Tax=Trifo... [more]
A0A2N9GGN0_FAGSY1.530e-748.94COX assembly mitochondrial protein n=1 Tax=Fagus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePFAMPF08583Cmc1coord: 24..87
e-value: 3.4E-15
score: 55.8
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePANTHERPTHR22977COX ASSEMBLY MITOCHONDRIAL PROTEINcoord: 9..81
NoneNo IPR availablePANTHERPTHR22977:SF5COX ASSEMBLY MITOCHONDRIAL PROTEIN HOMOLOGcoord: 9..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7582contigF-serratus_M_contig7582:4378..14742 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7582.18837.1mRNA_F-serratus_M_contig7582.18837.1Fucus serratus malemRNAF-serratus_M_contig7582 4378..14742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7582.18837.1 ID=prot_F-serratus_M_contig7582.18837.1|Name=mRNA_F-serratus_M_contig7582.18837.1|organism=Fucus serratus male|type=polypeptide|length=102bp
MATVGDGGRNDRLSWSKRAEQRLQDELKEIALKKCDASVAKFAACAKEKG
MLVVFSCRQQSRLMNECLHQHTNKESFERYKLDREMELYRASLEEKSSAP
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013892Cyt_c_biogenesis_Cmc1-like