mRNA_F-serratus_M_contig757.18831.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig757.18831.1
Unique NamemRNA_F-serratus_M_contig757.18831.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig757.18831.1 vs. uniprot
Match: A0A6H5K2H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H6_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 5.180e-43
Identity = 105/202 (51.98%), Postives = 122/202 (60.40%), Query Frame = 1 
Query:    1 EDCGFHNSDIVRRISQDLRAGGALREPSDPVAYALIGGGEWGPRAVARALLDSLYVAWERDTVLLDMEE-AVRLHRSSGLEEAQMWLKENIVKAIERCPQKAAVVLDNVHLLTGRDVLLLDPLLLLFDSTLSQIEFEGRKVSGAGSLFLLLLNEKDESSAGTAGLSGKDRLQQAWEYHIDNAFTPRALIGRIDAAFVLPAAP 603
            E  G    D +  I  DLR G AL +P  P  Y ++GGGEWGPR VA ALLDS+Y  W  D V+LDMEE A     SS L+EAQ  L   +  AI+RC  +A VVLDNVHLL G D+ +LD +L L D   S +E  G KVSG G LFLLLLNE  E S G   LSGKDRL  AWE+     FT RA +GR+D A  L   P
Sbjct:   81 EAAGLAGEDGIANILADLRTG-ALSQPV-PHTYVIVGGGEWGPRVVAEALLDSVYERWSNDVVVLDMEEQAAFWGPSSNLDEAQEQLNRQLCVAIKRCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNE--EGSEGMKRLSGKDRLLSAWEFR-GMEFTTRAFVGRVDVAVSLSKEP 277
[Close]
BLAST of mRNA_F-serratus_M_contig757.18831.1 vs. uniprot
Match: D7FL46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL46_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.750e-22
Identity = 68/134 (50.75%), Postives = 80/134 (59.70%), Query Frame = 1 
Query:  202 EEAVRLHRSSGLEEAQMWLKENIVKAIERCPQKAAVVLDNVHLLTGRDVLLLDPLLLLFDSTLSQIEFEGRKVSGAGSLFLLLLNEKDESSAGTAGLSGKDRLQQAWEYHIDNAFTPRALIGRIDAAFVLPAAP 603
            E+A     SS L++AQ  L   +  AIERC  +A VVLDNVHLL G D+ +LD +L L D   S +E  G KVSG G LFLLLLNE  E S     LSGKDRL  AWE+     FT RA +GR+D A  L   P
Sbjct:    3 EQAAFWGPSSNLDKAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNE--EGSEDMKRLSGKDRLLSAWEFR-GMEFTTRAFVGRVDVAVSLSKEP 133
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig757.18831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2H6_9PHAE5.180e-4351.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL46_ECTSI1.750e-2250.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig757contigF-serratus_M_contig757:367404..380526 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-05_006680.1
Exons7
Model size2086
Cds size1104
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932279.4258485-UTR-F-serratus_M_contig757:367403..3674511622932279.4258485-UTR-F-serratus_M_contig757:367403..367451Fucus serratus maleUTRF-serratus_M_contig757 367404..367451 -
1690964232.269451-UTR-F-serratus_M_contig757:367403..3674511690964232.269451-UTR-F-serratus_M_contig757:367403..367451Fucus serratus maleUTRF-serratus_M_contig757 367404..367451 -
1622932279.4437132-UTR-F-serratus_M_contig757:367475..3676231622932279.4437132-UTR-F-serratus_M_contig757:367475..367623Fucus serratus maleUTRF-serratus_M_contig757 367476..367623 -
1690964232.2793503-UTR-F-serratus_M_contig757:367475..3676231690964232.2793503-UTR-F-serratus_M_contig757:367475..367623Fucus serratus maleUTRF-serratus_M_contig757 367476..367623 -
1622932279.4730394-UTR-F-serratus_M_contig757:367637..3682251622932279.4730394-UTR-F-serratus_M_contig757:367637..368225Fucus serratus maleUTRF-serratus_M_contig757 367638..368225 -
1690964232.2888994-UTR-F-serratus_M_contig757:367637..3682251690964232.2888994-UTR-F-serratus_M_contig757:367637..368225Fucus serratus maleUTRF-serratus_M_contig757 367638..368225 -
1622932279.5907037-UTR-F-serratus_M_contig757:377467..3775911622932279.5907037-UTR-F-serratus_M_contig757:377467..377591Fucus serratus maleUTRF-serratus_M_contig757 377468..377591 -
1690964232.3480325-UTR-F-serratus_M_contig757:377467..3775911690964232.3480325-UTR-F-serratus_M_contig757:377467..377591Fucus serratus maleUTRF-serratus_M_contig757 377468..377591 -
1622932279.6058831-UTR-F-serratus_M_contig757:380452..3805261622932279.6058831-UTR-F-serratus_M_contig757:380452..380526Fucus serratus maleUTRF-serratus_M_contig757 380453..380526 -
1690964232.3596237-UTR-F-serratus_M_contig757:380452..3805261690964232.3596237-UTR-F-serratus_M_contig757:380452..380526Fucus serratus maleUTRF-serratus_M_contig757 380453..380526 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932279.4953442-CDS-F-serratus_M_contig757:368225..3689921622932279.4953442-CDS-F-serratus_M_contig757:368225..368992Fucus serratus maleCDSF-serratus_M_contig757 368226..368992 -
1690964232.298984-CDS-F-serratus_M_contig757:368225..3689921690964232.298984-CDS-F-serratus_M_contig757:368225..368992Fucus serratus maleCDSF-serratus_M_contig757 368226..368992 -
1622932279.5350296-CDS-F-serratus_M_contig757:372094..3722401622932279.5350296-CDS-F-serratus_M_contig757:372094..372240Fucus serratus maleCDSF-serratus_M_contig757 372095..372240 -
1690964232.3096101-CDS-F-serratus_M_contig757:372094..3722401690964232.3096101-CDS-F-serratus_M_contig757:372094..372240Fucus serratus maleCDSF-serratus_M_contig757 372095..372240 -
1622932279.5551012-CDS-F-serratus_M_contig757:375841..3759871622932279.5551012-CDS-F-serratus_M_contig757:375841..375987Fucus serratus maleCDSF-serratus_M_contig757 375842..375987 -
1690964232.3203487-CDS-F-serratus_M_contig757:375841..3759871690964232.3203487-CDS-F-serratus_M_contig757:375841..375987Fucus serratus maleCDSF-serratus_M_contig757 375842..375987 -
1622932279.5725887-CDS-F-serratus_M_contig757:377422..3774671622932279.5725887-CDS-F-serratus_M_contig757:377422..377467Fucus serratus maleCDSF-serratus_M_contig757 377423..377467 -
1690964232.3316345-CDS-F-serratus_M_contig757:377422..3774671690964232.3316345-CDS-F-serratus_M_contig757:377422..377467Fucus serratus maleCDSF-serratus_M_contig757 377423..377467 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig757.18831.1prot_F-serratus_M_contig757.18831.1Fucus serratus malepolypeptideF-serratus_M_contig757 368226..377467 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig757.18831.1

>prot_F-serratus_M_contig757.18831.1 ID=prot_F-serratus_M_contig757.18831.1|Name=mRNA_F-serratus_M_contig757.18831.1|organism=Fucus serratus male|type=polypeptide|length=368bp
MEEAVRLHRSSGLEEAQMWLKENIVKAIERCPQKAAVVLDNVHLLTGRDV
LLLDPLLLLFDSTLSQIEFEGRKVSGAGSLFLLLLNEKDESSAGTAGLSG
KDRLQQAWEYHIDNAFTPRALIGRIDAAFVLPAAPRLSTMDQYALQDDWL
RASQFPNKSKASSLHAVVGEALARIDQGTLRTAAVLLAGIATASVACWAL
SGCFGDSGDEFKEALRKTAAAGDAPPPRGGKTGVNNINSINSVNRGGDAL
NKMGLKSWMRAVVADKRGIVDACRGAVKNVAVAGTASKSKQYQYTSGGDV
GDKTPSTPTPAPTDVGDEAPSTPTPAPIDVRLPSANQGPMTRARARKQAK
GAYTADTTAIIPIIPGY*
back to top

mRNA from alignment at F-serratus_M_contig757:367404..380526-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig757.18831.1 ID=mRNA_F-serratus_M_contig757.18831.1|Name=mRNA_F-serratus_M_contig757.18831.1|organism=Fucus serratus male|type=mRNA|length=13123bp|location=Sequence derived from alignment at F-serratus_M_contig757:367404..380526- (Fucus serratus male)
GAGGATTGCGGATTTCATAATAGCGATATCGTTCGGCGTATCTCCCAGGA
CCTTCGAGCAGGGGGCGCCCTCAGGTACAGTGCAGTACACAGTACAGCTC
ATTACCTAGAATTTATTTAGTACAGGGTAGCTATAGCACAGTGTAGTGGT
CAATTTAGGTTTTTACAAAGAGTACTACGCTGGTCGGGAATATGAGCGCC
CCGTTTGGGCTGTCGTCAAAATATGTCGCGATCGACTGCAAACTGTTGCA
TACTGGTTCGATTCCTACCGTCTTAAGTGTCTTTAGTGTAGTCATTTATT
TCCGCGATTCTCTATTATTTTTAGCCTAAAGCCTAAACGTCCGACCCGAA
AAAGTACTACATACAGTAGTCGGTAGTCGGGCCTAATAATGGCAAAAGCG
CCCCATGGTAACTGTATTAATATTAATAGTATCATCATGTACTCTACTCC
ATACCTTCTCTCTTTCGCTTTCATAGAGATAATATAATACTAGATAATAC
TATACTGTGGTATTAGTAGTCGTGTACTTGGACTACAGTATACCTGAAAG
TCTGTTATATTACTAACTGTTATTTGCACCCAAATTGCATTGCATACAAG
TAGATAATATTTCTTTCTTGTTCCTTATTATTATTAATATAATAGCATCT
ATTACAGTAATACTGGTAATATTAATAGTTAGATTCACCCAATGATGATA
ATTATCAGAGAGCAAAACCTTATCTCCTGCTTTGTCAAACTGCAATTTGC
CTGATGGCTACTAATAAAATAATATAGTATTAATAGTATAATAGTGCTTA
CACCCATCCCATCCCATCCCATCCTATTACAGTAATAGACCCAGTATAAC
AAAATCAAGCTGTATTCGGGCTCATGTCTCTGTTTCGGTCTACCTGTATG
TTATATGGCGATTAATACAAGTTTACAGTATAACGGTGGGTTTCTCCCCG
ACATTATTAGACTATACTGTTGACCTTATGCTACTAACTTCGGGGAATTC
GGTTTTATGCCATGAAGAGGTTTTGTCCTGGCGGTCTATGTTCCCACCTA
AACGTTTTGACAGTTTGCCACCCTGTCTGGGGGATGCTCATGCGTTCAGA
TTTTTATTTTACAAAACTATCTAGACCGTGCTTTTACTAGGTTGTTTTCA
GTGGTGGTCGAGAGAGCCAGGGAACAGGGGACAAAAAAACGGGGGAAAAC
GATTTTCTGTTACTTTCGGAGCTTATCAAAACTACATTTTAGAGAGAGAA
ATTCCTAAAAACGTGGCGTTCTGGCAAGGTGCTTCAATGTTTGAAAGGGA
TGGGTAGTCTACACGCAGATGTTAATTTGAGCTTCAATGTTCGCAGGGAC
GAGTACTACTCCCAAATTGTTAATAGTGAAATCCGGGTATGTTTTGTAAA
TATCCCCGGGTTTTCAGATATATTTTTCAACCGAGCGTTTTCTCTGGTGT
TATGGGGTCTTGAGAAAACGATTTACTTGTCTAACTCTTTACATATACCG
TCAACATGTACCGTCAACCGACATCAATCGACATCGACTCAGTTCCGAGT
TTATCAGGTCACGTAATTGCGTCCCGATGGCATTCGCCGCCGAGAGTCCG
CCGGCACAGGGCCAGTAGTCCTTAAGCTGCTGTAGTTCGAGTAACAGGCG
CTTTTTTTATGGACACCCCGTGACCAAATTATGTGCGCCCCTCTTTGCAT
TGTGGTGACGTGCATCATGTGCGATACCGACCGTAGACTGTATCCAAGGC
ATATAAGTGGGGATTCGATATGTGCCTTGGACGCATGTCACAAATTTTGT
ACTGCTGTTTGTGCCTACTACTATACTGTATAGAGTGGGAGCCGGAGGAC
ATGCTTGCAATGAATGGTAGTACAGTGTTGCCGGGTTGCAATAAGTAAAA
AATCCAGCCCGTGGCCACAAGGTAGAAAAACACCATCTGGAAGGAAAGAA
CCTACCGGTACGACATACTCTCCATACTATCAATAAGAGAAGCCGATAAT
GGTACAAAACGATACTCGGAAAAAGCGATATCTCCACAAAAAAGGGGGGA
AGCACGTGTGGCTATCGGGGCATCTGCAAACGAAACGCCCGGAGGATACA
AATTGGTGCCACCTGTGGTTATAATAGTCAACAAGGGCGAACGAACCAGC
ACGAGTCCGCTTGCTTTGGGCTATCCTCTTATTGGTCCTTCCCATCACGT
TCGGGCATACCACTGCGTGCCGTAGTCCAGCCCTGGCTTTCGCTGCAGCG
ATCCATTCCACCATGAAATGTTACGCCGTTCTGCGCCATTCCTCCTCGTC
CTGGGCTGCAGTCGTCCACTAGTCGGCGTTGATGCCGAAAGCTCTGAGGT
CGTCCGGGAAACACCCCATCCACTCTTTTTCCTGCCCCCCCCACACACAG
CCCGCGTCCCCTACCATTTCTCCGAACATCACGCACTTCGGCAGTCTTGT
ATCATTCATGCGCGCCACAAATCCCGCAAACAAGATCCGCCTCCTGCGTA
AAGTTGCCTCCATGCTCTCACTTCCCGTCTTGACAAGCGTATACATCATT
ACGTTACTGTGCTGCGTTGTGTGGAAAAAATGGAAAACGTTGAAACGGTT
GCGAAAATATTAGATAGTATTAATAAGACTGTGTCAAACCTTTGATACAC
AATGCTCTTTCCACTGGAATGGATTGAAATAATTTCGTGACAAGTCCTGA
TGGAATTCGGCAGTACACGGTAACACAGATAATAAAAACAAAGCAAGAAG
CAAATAAAGACAAAAACAATATCACACGCAAAGAAAGATGAAGCTCCCAT
TTTTTGTCAAGTTTTAAGTCTGTCAAACAATGTCAATATTGATGTATACC
TAATACTGAACTATTACATACTGGTACGGTGTATGCCATATGCTATGTGG
TATGTGGTATGTGGTATACCGTTGGTGTCCTGCAGAGAGCCAAGCGATCC
GGTGGCGTATGCTTTGATTGGTGGAGGGGAATGGGGGCCTCGGGCAGTCG
CTCGAGCGTTGCTGGATTCTCTTTACGTTGCCTGGGAGAGGGACACCGTA
CTGCTCGACATGGAGGAGGCCGTCCGTCTGCACCGCTCCAGCGGGCTGGA
AGAGGTAAATTTTGAGACAGGACCATTTTTATGTTTCCATGTTTTCCGTT
TTTTTTCTAACAAGTTGAGAACGATTAATCTGTTAGTACACAAAATTCGA
CTTCGCGATCGACGAGGGAAAGGAACGGCTGAATCCTTCTCGCGAGAAAA
ATTAAGGCAAGTACCACAGAAGGAAGGTGGGTGAGAAATCCTGTGTGACC
CCGTCTGCTACGTCCATAAGCCTGACGTCCAGAATAAATGGGAAGACAAC
AAACACATCGAGGTGCATATGACCATATCATACGGATGAACCGTTGCTCC
AAATATCTGTACATCATACAAGCATGCTATTTCACAGAATTAGTTTATTA
TTCTTGATTTATTTATTTTTTGCCATCATAACAATTGCACACAGCTACAG
TGCTGTATGGCTGGTATTCATATGAAATAGCCATGGAGTATTTGATACAA
GGCTTACAAAAACCACAAATTTGTTTTTTTCACACCCGAGTTAAGAAAGA
GCTATAGAGTTTGGAATATGATATCTAGACGGATTGAATCTATTAATAGA
CAGATTGAATGTTTTGTTCGTGACAGACTGATTTATTTATTTATTTCAGG
ACAGATTGATTGGTATTAATAGTGGAAAGCAGGCAAAGCTAAGGGTGAAT
CGTTGGTTAACGAGGTATGATACTGTACCAGTATAGTACCAGGTATAAGA
ATAGAGATACTGTATTTTACTGTACTGTACTGCACTGCATCGCGATGCAA
AGGAAAACATAGGAAGGCCCGTAGTCACCTCAGGCTGGATGTCAAAAGGT
TTCTTACTATGCTCAAGAATTTGAAATTTCCAGCCAAGATTGTCCAAGAA
ACTATGTAACGATATATATATATATAGGATATAGTAATTCTTGCGTCGCT
GGTATAGACTATTAGTAATATTTATAGTCGGGATGGCGATGTCGATGGCG
ATGGCTGGCGGTCACGCGAATACGAAAAAGTGGTCTAACGGTTAACGTAG
GCTCTTATATGTTTTCAACTGAAGTTCGAATGCCGGTGTTGCCAACTTTT
TTTTGAGACCCCAGGTGGGTACCGTAGACCAAACCCCCATACCCCAGCTG
AACGCGTAATCCAAAATCGTGGCTAGCGCTCGGTTACAGCACCTTGGCTC
ATTCGACTCCAGATCGAGCGCAGCGCTTGATTCGCCTCTTTCTGTGTTCG
TTGCTCGACGGGCCCGGGACTGTCGTTATTCGTAGGGCAAGAACCGGAGA
CAGATGAGTAGATCCTTCGTGACCACAAGCAGGGTGTGATAGCAATATTG
CTGCAGTAGGTGCATCGGCCGTCGAGGTCGAGATACAAACCTCTCTGTCA
ACACCCAACCAGTTATCAATCAGTTGTCAGTCAGTCAATCCCCAATAATT
GCATTTTGACGCCGGCACTCGGCGAACCTACCCCACCAGGCGCAGATGTG
GCTCAAGGAAAACATTGTTAAGGCGATCGAGCGATGTCCCCAAAAGGCGG
CGGTCGTGTTGGACAACGTTCACCTCCTCACAGGCCGTGACGTGCTGCTG
CTCGATCCGCTGTTGCTACTCTTCGACTCCACCTTGTGAGTACCGCTAAA
CTCTATCTACCCCATACGTTTCCCTATTCTGTACCCAAGTACCAGTATCG
TTTGGTATAATATTAATAGTAGCCATTCCCGCTGTAGCCGAATCAACCAA
ATGAAACCAAATGAAACCATCCAATCAGACTGAGAATGCTTTAGCAGAAG
CTTTCAATCAATGATCTAGCTCTTCTAGATCTTGTAGGCTACAGATAAGA
TGGAATAAAAATATGCAGTCGGCGTGGAGGGCCAGAGTTCCCCACGATGG
TCATAGGTGTACACTTTTACGCCATTATACGAAGATAGGCGCATATTAAT
TGGTCCATGGTGACCTGCCAAGGCAGCACTCATTCGGAACTACCTTGAGG
TGTACTGGCCCTGTGCCGGTGGACTTTCGGCAGTCAACGCCATCGTTACG
CTATTGCGTGACCGGATAAACTCGGGGCTGACCCGACGGCGTATGGCGGT
TTCATAAAAATAAATGGACGCTGCCGCGGAACTCGGGAGGAATCCCGTAA
GTAAGCACCATATTTACCCTGTATGGCGATGAGCAGACTGACGCGGGACG
GGACGGCTGAACCCGTCGCGCGAGGCCAAATTCCTAGGCACGTACGGGGA
CAGGGGAATGCTCATTTTCCCTTTTCAGCTGACCACAAGCAGGATTGGCA
ACCTTACCCGCTTGATCCATACTCTGCTATATGTGATGACCATACATACA
TACGTACATACTATTACACGGCCATATTGCACTTACTCGTTGCACGGGCT
CTATAATCACGTAGTATAATATAATGCTCAGAAGGTCTAGGTGCGTTCTG
TATTTTTCTTCAAATATAATATAATAGTAAGATGTAGCACAGTCAGTATC
TGGTATCATGTTTGGGTAAATGGGACAAAAATAAACTATTTTCTCCGATG
AGACTGTCTAGCCATTTAAAATCTTTTGTTAAGATGAAACATTCAACGCT
TCGCATCTTTCGGAAACTACCTTAAAAACTGTCAAGGTGTGTTATAATGT
GTTTGTTATAAGGACTTCTTGGTCATCACTTTCATTTATTGTAAATTTAG
CATATTTAGCATATTTAGCATACTGGACATCAACCGTGTATCATATGTCT
GCCAATACTGGTTGTGGTCAGTTCTATCCCAGTTCGCGCGTGAGAATTTG
ATCTCGCGAGGCAGGTTGTGCCTGCGTCAGCCCGGTCATTGTGCACACTC
GGGCTAAATGTTGTGGCTCATGTCCTTCCTGATTTCCGTCACGATATCCA
TCTATACCGCTAACCGCCATGGGCTCAGACCCGAGTTTATTAGGTCACGC
AGTTGCGTATTATACCTATGGCGTTCACTTGCTACGAGAGTCCACCGGCA
CAGGGTCAGGAGCACTCGAGATAGCTTGAGTAACGGTAGATGCCTATTCA
AGTTTCCCCATTAGACTAGCCAATTAAAGTATGCCCCTCTTTTCCAACAC
CCACTATTACAGTACTGTTGGTACATTGATGTATTAATAGGTATACCCTG
TACAAAATAAGTACCAGTACTGTAGCATGTCGAAACAAAAATAAAGCTTG
AGTGGTATTACGGTACCTGTATACCTGGTATACTAGACTATAACAACAGC
CGTGTGCCGTACCTGATTACTCAAAATACCTATTAATATTAAAAGCTTAG
ATCTACGGTATTATACCGGTAGCTGTATTGCCTTAGCATCACTGTAATGC
CAACTACAGGTCAGGTCAGGTCAGTACAGTACAGTACAGTACAGTACAGT
ACCTGGTGAATGCGAGCACGAGTACTGCACGACGAACCTGTGTGGATAAT
TACTGTATTAGTGGCTAAACCGCGGTACATTACGTTGGGCTTGCCTCTGA
AGATGTTACTAAAGATGTTGCTGAAAATGTTGCATGTCAGTGAAGATGCT
ATAGGCGGCGCGGTACCGGTGTAGCTCTAGAGGTGTAGAGGTGTTCTCAG
GCAGCGTAATGGTCGGGAATGATCGGATTCCAGCATCTTTCTACGGTATG
ATAATGACATTTTGCTATACTATACTGGTATAAGATAAACGACGTTGAAC
ATAGCGCCATCGATGTACCTGGTAATATAGACTAGCAGGGTAGAGTAGAG
TAGAGGTTTCTCTTCACCCCAAGAAGTGTTGTGCAGTACCGTACAAGGTA
AGTAAGTACCTACCAGATAGACCAACTACGGTCCTGCACCGCCGTACCCT
TATTAGACGGTAAGAGACGCTTACAGACGGTATCATAGGAGAAGTTACGA
GATGGGCGACATCAACAAACCACAGGTGCCTCTTGTAGATGGCGTTACCC
TAGGAATAGCTTCCAGTAATAATAACGCAACTATAGTATTGATAGTTCTA
CAGTATTACACAAAACTCTCAGGCAGGGACGGGGACAGGAAAAATTATTG
TTCTTTGTTCAGCTGACCACGTGCAGGATTGGCAATCTTACCCGGTTGAT
CCATACTCTATTACTGCTATGTGACGATGTGTGACCACATACATTGCGTC
AGTTATTCCGTCCCGCGACACTAATTACGAACGAAAGCTCTAGTAACGAT
ATCTTATGTTTACCACATCACCTCTCAGTTAGTTCCCTTCGAAGACATAT
TCTCTTCCCTCTTGTCGAAATATATTCTGTACCTGGTATATTTTGAAGGA
CGTTTGTGCCCTACTGACCTCATGACGGTTTACGGTATAAATAAATGGAC
GCGATCGCGTAAAGAGGGCTTAATCCCGCGTGTAAGCACCAGATTCAGCT
TGAGGGTGGGGAATAAGGAGGCTGACGCAGTACGGGACGCTGAACCTGTC
TCGCGAGACCAAATTTTGAGGCGCGAACGGGGACAGGAAAAATTCACGAG
CAGGATTGGCAACCTTGCCCGGTTGTTCCATCGACTGCTTTCCTACAAGT
GATGGTCACACATACTATACCATTCTGTATACCGTGTACCGTGGATGCTG
CGAAATTGAAAAAAAATATTAATATATATATATATCTATAGGAATGTCTA
CCCACGGAGGGTGTTGTTGAACGTTTGTATGTTGTATCAAGTGTACCGCA
GCAGTGTATGTTGTATGGCAAAAGGGAGCAGCAGTGTATGTTGTATGTTG
TATCAAGTGTACCGCAGCAGTGTATGTTGTATGGCAAAAGGGAGGGAGCC
AAGAGTCGAGGCAACACTGCACTGGGCATGCTACGATGGAACCGATAGAC
CCATTGGATAAAGGAGTGTTGCTAAAAATAATATAGTACTATTTAACCAA
GGAATTAACTATTAATATGTTATTAACTAAGTAAGATATATCTAGCCCAT
GCATTACTCTCAACACAGCTACGTCTTGGAAATAGCCAATACACCATTCT
GCAATTTCTAGAGGATTGCCAATTCCTGTCTACGCTAGCTAGAGACTGTT
TTGATGAACACTCTCCTTGCGATTTATACAAAAAAAATGGGGATATCTTC
AAGTTTTCCGTTTGCTCCATCGATACCTGGTATTTGACACTTCATTTCTG
TTTCTTTGCTTTGAACCCCTTAAATAGTTGCGACGCATACTTGGAACAAA
AATAAAACATCTGTTGTGCCCTGTTGTGTGTGGCAGGTCTCAGATCGAGT
TCGAGGGAAGAAAGGTCAGCGGCGCCGGATCTCTGTTCCTGCTCCTGCTG
AATGAGAAAGACGAGTCTTCCGCGGGAACAGCAGGATTATCGGGGAAGGA
TCGTCTACAGCAGGCGTGGGAGTACCATATAGGTGCGTCGAATTATAGTA
CTTGTATTTTCAGTGTAATCGTTGTTTCCCTTGAAAAACTATTATAATAG
CCTGTACCTCAAACAGAGAAAAATCGTGTTATACCACATTTTAGCAATAT
CTTAGTATCTTGATATCGTAATTGTTGTTGTGTGGTTGTTGTCTTCACAT
TAAAAAACGTTCCGATCTCTGCTCAGTGCCTTCCAACATCCGTACTGGTC
CAACTGACGCGAACGCCTTCCGTGGTCACAGGCTAACTTCCCCCAAAAGG
GTACATATTTTGAGAAATAAAAGAGAAATTAAAGGACCCAGAAAAGTCAA
CACACACGCGATAATAGGAACCTCCCCCCCCCCCGGAAAAATGAGGCTCC
AGACAGTCAGCCGTCGCAGGCGACGTGTCGGACAAAGGGGATAGTTGAGC
CCATCGCTCCCACTCGACACGCGAGGCCAAGCAAAATAAGACAAACAAAA
ATAATCAAGGATCACCAACCAAGACAATAATAATATCACATGATTCTATC
CTTGTACCCCTATTAGGCCGGGGTGTATTCGCCGCCGGGTTTGCACCGGC
CGGGCCATTACTAAGTGGATGAGGCCTTTCAACTTTCAAGTTGCCATTAT
TAATACAAGTAGGTCAAATATTAACAGGTTCAATTCGTAAAGAAGTATTT
CATACTTCATACCAGTACTGGTACTTGAGTGTTCTTGAGTGTTCTTGGTA
CAATAGGTACATACCAATGCGGCCTACCTGTAGGTCGCTTCCGTCTTATC
AATAGATATAGAAAACTACAGTATTATACAGTATAGTCTTAGATTATCTA
CATCTAGCCACTGCTCGATGCTGGATGCTCCTTCCTCCTTACTTAATCTA
ATTATACGATCATGAGTACCTGACACTGAATATAACACAACACTGGAGTT
GTTATTCTGGGTATAAGTGGGGGGCATCGTTAATATATCGAAAGCGAGTA
ATACTAAATATACTGGTAACAATGAGAAGGGCATATTGCTACTTGTATGG
ATAATGTTATTTAATATTAATGGTTATTTAATACTGTATTATCCTAATGA
AGCCTACAAACAAGTTGTTATTGTTATTTTTGTTATTATTATTAATGCTG
TTGTTATTTAATACTGTTATTATGCTAATGGAACAGGGGTGGGCGACCAA
AGTATTCTGCTGTACGTCCTTATATCAATTTAGGTTTACTTGGCTAATAG
ACACTCTTTCCACGCTGATCGTGTGCTTTTACGGAGTGACCGTTTGATTG
GCATGATTACTATTGGATTACCTTAGACTATTATTATTATACTTCTATAC
TACTATACTGTTCCAGGTACAATTTGTTGTTCGGTAATATCAAGCCAAAT
ATGGCCCTATATACTCCGGCGCCACCCATTCAACTAGGTTCAAAGCTACA
ACTATGACCGTTGGAGTGGTTACAATTATATTGGATTCCTTTAAACTATA
CTAGTATACTGTTCCAGGTACAATTTGTTGGTCTGTAATATGAAGCCAAA
TACGGCCCTCAGAGCCATCGTGGTGGAGCACGGTCGACGTAATTGTGAAG
GTTAAGTTTGCTCCGAAACTAATTAATGTTAGTACTTCCTTCTGTTACAG
CAGTACTGTACCCTCTACATTTCTACTGTATAAAACTGCATACCAGTATA
CTATATACTATACTAGGTTTGAAGCTACAACTGTAACCATTGTATTGTCC
AGTAAAATCGCAATGTACCAGGTACGATGGTAATAACGATGGTAATTGTA
TTAGAAAACACTTTCGCTGTTGGCCTCTGAAATGTAGTCCACACCTTGGA
CATGTTAGATACCTTAGATACCTTAGATAGGGCAACATGACAAATTTTAA
TGCGACATGTTACATGTGTTGAAGGGACAATGTGCCCCAGAGAATCGCAA
GCACTACGATGTCGCATCACCAAAATACTCTCAACGAAAAAAACTTTAAT
CTCGCGTATGGGGTGCAAAATAAATACATAGCCTGGTACATAAATAAATA
CACACACCTATAAAGAGATGCTGGCCCTGTGCCGACGGACTCTCGGCTGT
GAACGCCATCGGTACGCAATATTGCGTGACCCGATAAACTTGGGACTTAC
CCGATGACGTATGGCGGTTTAATATAAATATATGGACGCCGCCGCGGAAC
TCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGAGTATGGAGAT
GAGCAGGCTGACGCGGGACGGAACTGCCGAAACCGTCTCGCGAGACCAAA
TTCCCAGGCACGAACGCGGACAGGGGAATATTATTTTCTCTGTTCAGCTG
ACCACGAGCAGGATTGGCAACCTTAACAGGTTGATCCAAACTCTTGCTAT
ATGTGTGACCATACATGGTACATAAATAAATACATACATATATGTAACTT
GGGTTAGTATCGATACTATCCTGAGTGGCACCGGCATCGATACCATATTG
CTCACTTCAACGTGTCACTTACGGGCAACACAAGACATTTTGGGTCTTGA
TCAAACAATCAGGCGCAATGCAATACTGTACTGTACTCATTGGTACTACC
GCCGTAATATACCTTGACATTGTTGATTAATAGTACGGACAATACTTCAA
TACGTATGATATTATCGAAGGTGTTTCATTCCCACCTACTGTACTGTACT
AGAGTGTTTCACCATTAGTGATAAGGGTACATTAACATCAATATTATTGC
TGTATTTTCGAAGACAAGCTTTCATTTCACACCTCGTCTTGGTTGGTGTG
ACTTTCACACCTCGTTTCGATTGGTGTGACTTTCACACCTCGTTTCGATT
GGTTTCGATTGGTGTTACTCTTGTGACTCTTCCCATGTACAACAGTACTT
GTCAGCAAAACAAGTAACACTAATCTGAACCAGGGTTTCAATTCCCCCCT
CCAACCCTCCAACCCTAACCCTCTACCATCCCAAGAATGCCTGCCTCGAA
CACCGACACCACATAACTTGAACAATTTAGAGAAGAAGTTAATGTTGTGC
TGTCTCCTGCATTCATCTCCACCTGTCCTCGTCTCAAACCTGATGACGAT
TGCCGACGATTGTTTTCGTGGCCTCACCTCCCAGACAACGCATTCACACC
AAGGGCACTGATCGGACGCATCGACGCAGCCTTCGTACTACCAGCGGCGC
CCCGCCTTTCCACCATGGACCAATATGCTCTGCAAGATGATTGGCTGAGG
GCGAGCCAATTTCCAAACAAGAGCAAGGCTTCATCATTACATGCCGTGGT
CGGCGAAGCTCTCGCGAGGATCGATCAAGGCACCCTGCGGACTGCCGCCG
TCCTTCTGGCGGGGATTGCTACGGCCTCCGTGGCTTGCTGGGCATTGTCG
GGCTGCTTTGGCGATTCCGGTGACGAGTTCAAGGAAGCGCTGCGAAAGAC
AGCAGCTGCGGGCGACGCACCACCTCCACGCGGCGGAAAGACAGGCGTTA
ATAACATCAATAGTATTAATAGTGTAAATAGAGGTGGAGATGCTCTCAAC
AAAATGGGCTTGAAGAGCTGGATGAGAGCGGTGGTGGCAGATAAAAGGGG
CATCGTGGATGCATGCAGAGGTGCCGTGAAGAACGTAGCCGTTGCTGGTA
CTGCAAGTAAGAGTAAGCAGTACCAGTATACGTCTGGTGGTGATGTAGGT
GATAAGACACCATCCACTCCTACCCCTGCCCCCACCGATGTAGGTGATGA
GGCACCATCCACTCCTACCCCTGCCCCCATCGATGTACGCCTCCCAAGCG
CTAATCAAGGCCCGATGACCCGAGCCAGGGCGCGAAAACAAGCAAAGGGT
GCGTACACTGCAGACACCACCGCGATCATCCCGATCATTCCGGGCTACTG
ACCTAACAGGCTAACAGGGGGTGGAGTACAAGTAGCAACAGATCCAACCG
GCATCTCCAGTAGCAGAGTAGCAGTAGCAGATTAGCAGAGTATCAGAATC
AGTACCCTGTAATTGGGTTTCGAGTACACCACCGCCCACACGTTCTCTTG
ATTATTGATTTGAGCTCGACAAAATTTGTTCTATTCTATACTACTAATAA
TAGAAAAGGAGGAAATGATGGTGCCGTCCCTCCTGTAATGTAATCAAGAG
AACATTTCTCGAAGGCATTTCTACACCACACTCGAAAGGGCATTCACGTT
AACCGGTAATGGAGATAAAAGTTGTGTAACTGTAGTATACTACATATCAG
GTACTGAAGCGTAGATGACGTTTTCATATGGGGGTTGATGGCGTTCATGG
ATACATGTAGTACTAAAGACACATCAATGTGTCGCGGGAGTTTCCCATGG
GGGAGGCGTTCCGCTACAAACTACAATAAGCGGTGTAGTGTGCAGTAGTA
CAGCGTTGTTTCCACTCCATCTTGGCGTGTGCCGATACTGCATCTTTGGT
CTGTACAAGGTAGCTCTAAGCTAAGCGTTTGCAAATATCCACGTGCAAAT
ATCACGGCATTAAAGGATCCTAACTGAGGTAATGCCTAGGTAACGTTTTC
CCTTGTCCTTCAGAGCGGTTAAACACGCATGCTACGTACAAATTCTATGT
GGGCAAGCGATGAAACTTTGCCGTTATTTCGCTATAAAACCATATGAACA
TTTCGCTATAAAACTATATGAACATATTGCCACGTTTTGTACAGCACTGG
AAACGCCTGATAATTCTTTCCGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig757:367404..380526-

>mRNA_F-serratus_M_contig757.18831.1 ID=mRNA_F-serratus_M_contig757.18831.1|Name=mRNA_F-serratus_M_contig757.18831.1|organism=Fucus serratus male|type=CDS|length=2208bp|location=Sequence derived from alignment at F-serratus_M_contig757:367404..380526- (Fucus serratus male)
ATGGAGGAGGCCGTCCGTCTGCACCGCTCCAGCGGGCTGGAAGAGATGGA
GGAGGCCGTCCGTCTGCACCGCTCCAGCGGGCTGGAAGAGGCGCAGATGT
GGCTCAAGGAAAACATTGTTAAGGCGATCGAGCGATGTCCCCAAAAGGCG
GCGGTCGTGTTGGACAACGTTCACCTCCTCACAGGCCGTGACGTGCTGCT
GCTCGATCCGCTGTTGCTACTCTTCGACTCCACCTTGCGCAGATGTGGCT
CAAGGAAAACATTGTTAAGGCGATCGAGCGATGTCCCCAAAAGGCGGCGG
TCGTGTTGGACAACGTTCACCTCCTCACAGGCCGTGACGTGCTGCTGCTC
GATCCGCTGTTGCTACTCTTCGACTCCACCTTGTCTCAGATCGAGTTCGA
GGGAAGAAAGGTCAGCGGCGCCGGATCTCTGTTCCTGCTCCTGCTGAATG
AGAAAGACGAGTCTTCCGCGGGAACAGCAGGATTATCGGGGAAGGATCGT
CTACAGCAGGCGTGGGAGTACCATATAGGTCTCAGATCGAGTTCGAGGGA
AGAAAGGTCAGCGGCGCCGGATCTCTGTTCCTGCTCCTGCTGAATGAGAA
AGACGAGTCTTCCGCGGGAACAGCAGGATTATCGGGGAAGGATCGTCTAC
AGCAGGCGTGGGAGTACCATATAGACAACGCATTCACACCAAGGGCACTG
ATCGGACGCATCGACGCAGCCTTCGTACTACCAGCGGCGCCCCGCCTTTC
CACCATGGACCAATATGCTCTGCAAGATGATTGGCTGAGGGCGAGCCAAT
TTCCAAACAAGAGCAAGGCTTCATCATTACATGCCGTGGTCGGCGAAGCT
CTCGCGAGGATCGATCAAGGCACCCTGCGGACTGCCGCCGTCCTTCTGGC
GGGGATTGCTACGGCCTCCGTGGCTTGCTGGGCATTGTCGGGCTGCTTTG
GCGATTCCGGTGACGAGTTCAAGGAAGCGCTGCGAAAGACAGCAGCTGCG
GGCGACGCACCACCTCCACGCGGCGGAAAGACAGGCGTTAATAACATCAA
TAGTATTAATAGTGTAAATAGAGGTGGAGATGCTCTCAACAAAATGGGCT
TGAAGAGCTGGATGAGAGCGGTGGTGGCAGATAAAAGGGGCATCGTGGAT
GCATGCAGAGGTGCCGTGAAGAACGTAGCCGTTGCTGGTACTGCAAGTAA
GAGTAAGCAGTACCAGTATACGTCTGGTGGTGATGTAGGTGATAAGACAC
CATCCACTCCTACCCCTGCCCCCACCGATGTAGGTGATGAGGCACCATCC
ACTCCTACCCCTGCCCCCATCGATGTACGCCTCCCAAGCGCTAATCAAGG
CCCGATGACCCGAGCCAGGGCGCGAAAACAAGCAAAGGGTGCGTACACTG
CAGACACCACCGCGATCATCCCGATCATTCCGGGCTACTGAACAACGCAT
TCACACCAAGGGCACTGATCGGACGCATCGACGCAGCCTTCGTACTACCA
GCGGCGCCCCGCCTTTCCACCATGGACCAATATGCTCTGCAAGATGATTG
GCTGAGGGCGAGCCAATTTCCAAACAAGAGCAAGGCTTCATCATTACATG
CCGTGGTCGGCGAAGCTCTCGCGAGGATCGATCAAGGCACCCTGCGGACT
GCCGCCGTCCTTCTGGCGGGGATTGCTACGGCCTCCGTGGCTTGCTGGGC
ATTGTCGGGCTGCTTTGGCGATTCCGGTGACGAGTTCAAGGAAGCGCTGC
GAAAGACAGCAGCTGCGGGCGACGCACCACCTCCACGCGGCGGAAAGACA
GGCGTTAATAACATCAATAGTATTAATAGTGTAAATAGAGGTGGAGATGC
TCTCAACAAAATGGGCTTGAAGAGCTGGATGAGAGCGGTGGTGGCAGATA
AAAGGGGCATCGTGGATGCATGCAGAGGTGCCGTGAAGAACGTAGCCGTT
GCTGGTACTGCAAGTAAGAGTAAGCAGTACCAGTATACGTCTGGTGGTGA
TGTAGGTGATAAGACACCATCCACTCCTACCCCTGCCCCCACCGATGTAG
GTGATGAGGCACCATCCACTCCTACCCCTGCCCCCATCGATGTACGCCTC
CCAAGCGCTAATCAAGGCCCGATGACCCGAGCCAGGGCGCGAAAACAAGC
AAAGGGTGCGTACACTGCAGACACCACCGCGATCATCCCGATCATTCCGG
GCTACTGA
back to top