prot_F-serratus_M_contig757.18822.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig757.18822.1
Unique Nameprot_F-serratus_M_contig757.18822.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1819
Homology
BLAST of mRNA_F-serratus_M_contig757.18822.1 vs. uniprot
Match: D8LU71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU71_ECTSI)

HSP 1 Score: 776 bits (2004), Expect = 7.540e-256
Identity = 434/785 (55.29%), Postives = 553/785 (70.45%), Query Frame = 0
Query:  462 DRVFRQQMRQTIKACMKTLHILMKHAWVRSSPPVLGIRKDLLTALVTCGVSSTEAAETAMATMCNLTNDVCCDLDMLEEAGALQHIFSQAFCDNRVVLTHVAGTLANLASVLEPTAT--GGRAFDPKGLTIFDVVVRLANFDDQRLAFRISAFLYGLTRKRDCVKILYDLRGLSDVIFKIFRSGVFYTQNYCLQTFFNLTRNREFAMSIV-DPDLMEGFIVASMVHSNGARIKELSSQVLFHLISNPSTRTAVLRGQGLWTLVQLAKVSRSVTSMRFALLALFNLACDLRENSKWLDEHALAAVMEFDDEVLGAPAYPGLLYLASTQNGRLSEILVSTRVAREAMAKIEGAKFLKRDRALEEDEKSMARATAAVIPGSIHQEDSSFDEDNLS---RDTLEDVV---RERSRLRSSFVATHLLPTLSTVYNLCCKSAKAARLFLREGVVEYIASLLAEMRATEERSRYHPQVEIMCAAVLSCMIDDVALVPRLIESGVTLSIVQGLRSRFVPVRLVSLWSLLMLSIP-------TTETRPSSSSGHRSR--SKLRMWMLMCRQAVTQCKAVLALWTLWEGTKASLDSEASKDVRFAIATVLQMFLMDQTVAVAVVQQRGTELAAIMMMDSTDA-SITELSLHSFPEIPENDSGFDERSDAISKVATISCAVPTVYLPGIP---VGSVCEGCLRVFLGVLPTHDENVRDLCSLAMRGLVGNEDLLQDLIMEPRFTDVLKLLLQDATPIGKAHIRAILQRVVVRSSAPGIADLSPTLLDLTDCVFQRK 1224
            D VF++QMR T KAC+++LH ++KH WVR  P + G+++DLL  LV+C V+ T                                   QA     VVL HV+G L NL+ V+  +++  GG       +T+FD + RLA  DDQRLAFR SA LYGLTRKRD V IL DLRGL DVIFK+FRSGV  TQNYCLQ F N+  N++FA SI  DPDLMEGFIV  MVH+N + +KE+SS+VL++LISNPSTR   L+GQGLW LVQLA  + S  SMR ALLALFNLACDLREN++WL+E+ +AAV++FDDEVLGAPA+ GLLYLAST + RLS++L+STR+A EA  KIEGAKFLKRDRALEED+K MAR TAA+ PG     DSS +E+N +   R   +      +++ RLR +FVA+HL+PTL+TVYNLCCKS KA +LF R+ + E +  LL EMR  ++ + YHPQVEIMC AVLS MI++ ALVP+LIE  VT +I QGL SR V VRL SLWSLL+L IP       TT   P+S+    +   +++RMWML CR+AV +CKAV ALWTLWE T A+L++ A + +R+AI+TV ++F MD+  A A V+QRG EL A+ M  S D+ +++ LSL     + E+DS +DE S A+ KV+ + CAV TV+LP +P   V SVCEGCL VFL VLPT +  VRDLCSLAMR L GNE+LL DL+ +PRFT VLK+LL++AT +G  HI A+L+RVVV S+ PG+ADLSP LL+LTD VFQR+
Sbjct:   59 DEVFQRQMRATAKACLRSLHAILKHKWVRLDPLLEGMKEDLLRMLVSCSVAGT-----------------------------------QALSPRLVVLRHVSGVLGNLSRVIVASSSDEGGPPRWKSRITLFDALKRLACVDDQRLAFRTSAILYGLTRKRDYVNILPDLRGLGDVIFKLFRSGVPQTQNYCLQAFCNMAHNKDFAASIASDPDLMEGFIVGCMVHTNSSYMKEMSSEVLYYLISNPSTRLTALKGQGLWALVQLADANGSTVSMRLALLALFNLACDLRENARWLNENTVAAVLDFDDEVLGAPAFTGLLYLASTHHRRLSQMLISTRMALEARVKIEGAKFLKRDRALEEDKKFMARTTAALKPGDDEGNDSSSEEENATDRQRSFSKSKYFGYKQQGRLRRTFVASHLMPTLATVYNLCCKSGKATKLFFRKNIPEAVTGLLEEMRKAQDETYYHPQVEIMCVAVLSTMIENAALVPKLIERHVTPAITQGLDSRIVAVRLASLWSLLLLGIPGSGNNDDTTTAAPASAGKDHAGGGTQVRMWMLFCREAVVECKAVSALWTLWESTAATLEAGAREHMRYAISTVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVSALSL-----VGEDDSDYDETSSALVKVSALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDPRFTTVLKVLLEEATSVGGMHIEAVLKRVVVLSAVPGVADLSPALLNLTDYVFQRR 803          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig757.18822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU71_ECTSI7.540e-25655.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 852..1199
e-value: 1.5E-7
score: 32.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 326..577
e-value: 2.2E-6
score: 28.6
NoneNo IPR availableGENE3D1.25.10.110coord: 646..768
e-value: 3.5E-5
score: 25.6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1021..1818
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..960
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 961..980
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1001..1020
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 981..1000
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 496..758
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 876..1197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig757contigF-serratus_M_contig757:38477..95788 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig757.18822.1mRNA_F-serratus_M_contig757.18822.1Fucus serratus malemRNAF-serratus_M_contig757 37572..105586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig757.18822.1 ID=prot_F-serratus_M_contig757.18822.1|Name=mRNA_F-serratus_M_contig757.18822.1|organism=Fucus serratus male|type=polypeptide|length=1819bp
MRQALFSPGAVTLALETLFLEGEKHGDQGGGGQVDRESRVAARCRQGGAT
ALVAIFAGAEASQATSLVQEGFLFEVECFLHQAEAAQDRKAQELLVYSMW
HLTLTLTNARPFAHPREARRTTPGDNFVPEINAAYNRRISCWSMAPADDE
PLTSTLLRSLPGLGYRKNSSGELYLAGFMSDAGSLSGGLDRIRRRSSTSG
SKSGGSSKIRGTSLQSQRYSGRVPSAHDGTARDKEPPINREIDASQSSFQ
NLEDDNQEITTRKHSSDESALLTGARILPEMSQEGRTLSQDEESKALKGK
QRFFSGVEKRSVFDEQGFQENPKVPHVISCGIMARLLHLAEFGMTGFIRE
CCMGALCNLARKTWINDEVLKDARLLKTLLNGIRASLTRAEEGTPALAAK
GVWNVISRMVQDRLYIDDCVQSGVVGSLCGAAKGAADLLTATDESADDVN
VEGAGATDEEGDRVFRQQMRQTIKACMKTLHILMKHAWVRSSPPVLGIRK
DLLTALVTCGVSSTEAAETAMATMCNLTNDVCCDLDMLEEAGALQHIFSQ
AFCDNRVVLTHVAGTLANLASVLEPTATGGRAFDPKGLTIFDVVVRLANF
DDQRLAFRISAFLYGLTRKRDCVKILYDLRGLSDVIFKIFRSGVFYTQNY
CLQTFFNLTRNREFAMSIVDPDLMEGFIVASMVHSNGARIKELSSQVLFH
LISNPSTRTAVLRGQGLWTLVQLAKVSRSVTSMRFALLALFNLACDLREN
SKWLDEHALAAVMEFDDEVLGAPAYPGLLYLASTQNGRLSEILVSTRVAR
EAMAKIEGAKFLKRDRALEEDEKSMARATAAVIPGSIHQEDSSFDEDNLS
RDTLEDVVRERSRLRSSFVATHLLPTLSTVYNLCCKSAKAARLFLREGVV
EYIASLLAEMRATEERSRYHPQVEIMCAAVLSCMIDDVALVPRLIESGVT
LSIVQGLRSRFVPVRLVSLWSLLMLSIPTTETRPSSSSGHRSRSKLRMWM
LMCRQAVTQCKAVLALWTLWEGTKASLDSEASKDVRFAIATVLQMFLMDQ
TVAVAVVQQRGTELAAIMMMDSTDASITELSLHSFPEIPENDSGFDERSD
AISKVATISCAVPTVYLPGIPVGSVCEGCLRVFLGVLPTHDENVRDLCSL
AMRGLVGNEDLLQDLIMEPRFTDVLKLLLQDATPIGKAHIRAILQRVVVR
SSAPGIADLSPTLLDLTDCVFQRKEVEESSPKLSAVDGADVAVARPCQGY
SVRLSARRTVSAHAGINASGGGVGAAAGRKDRGRKCETDPDCMDTTIDKK
MAKIVCSGPQQGSNGPDRLLSSPAAASSVGSASRPAKRSRLASARAQRMI
RARRLRTARCGMLHEITDVQASSNGSSAVHSSSRYPGSGEVGCKDSAERD
SAANGLFASNFDVFQEMKTAIDIHQHRGRACQGEDNNRERTGRTPRSPSP
KDDHQVIVNTTATGVSHTGRSSTVPKAGSRLEACASLQRSTSSTVGIVGL
GAHDQAVKMRGLPGDDLSNNVNEDLILAAEEEVVEEDDSEDESSESSTPN
EELMKIDYNADEVRQVQRLVFRVVEAELAVTTEETAVEVISQLKETTRRH
SAAYQEASKEIRKEIMRTRRGQALALPRAMRAGVKEPVPSPRTVKTDSEA
RQRAGGTAEPPTDPQSQQYYWDPAKEVLGLAGLEGLEMTPAWNFSRKENL
SITKFTDDGNIPCTLEMAIPVPLPEDLTPRPKDSKTLCTRALLLELCVLG
SLERPVPEIPSEPSAAINNDSDPSNYGSDHTSTVASASEGGDSSKHDVSK
NATPSLPLRPAEVRPPNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold