prot_F-serratus_M_contig756.18817.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig756.18817.1
Unique Nameprot_F-serratus_M_contig756.18817.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length188
Homology
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BLAST of mRNA_F-serratus_M_contig756.18817.1 vs. uniprot
Match: A0A6H5JTK7_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.580e-41
Identity = 80/146 (54.79%), Postives = 94/146 (64.38%), Query Frame = 0 
Query:    3 NSLVDDFRGCYETGCLPEYVLDGLLNDLPDSRWSCELAIVSAISECYMTFDLQQPFILDGLTVYFFKSDDLDRATNPFNISISEDEVTGYVYSFTGVNTAGTPLGTGENFSFPATSRGRYVRFTPILDDDQWCSINEVEIYVSSET 148
            ++   D  GC   GC P+ + DG LND+P+SRWSCE A+     ECY TFDL     L  LT+YF+K DD+DRATNPF +S S D  T Y  SF  VNT  T +G GE+F+FP  S GRYVRFT  L DDQW SINE EIYV   T
Sbjct:   41 DTRASDSNGCGTDGCSPDLMNDGDLNDVPESRWSCETALAGTEFECYATFDLGSSQSLTKLTIYFYKCDDVDRATNPFIVSTSTDGTT-YTTSFEDVNTIPTAIGAGEDFAFPTGSSGRYVRFTGELADDQWLSINEAEIYVDVAT 185
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BLAST of mRNA_F-serratus_M_contig756.18817.1 vs. uniprot
Match: D7FRB9_ECTSI (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB9_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 7.970e-40
Identity = 73/125 (58.40%), Postives = 85/125 (68.00%), Query Frame = 0 
Query:   24 DGLLNDLPDSRWSCELAIVSAISECYMTFDLQQPFILDGLTVYFFKSDDLDRATNPFNISISEDEVTGYVYSFTGVNTAGTPLGTGENFSFPATSRGRYVRFTPILDDDQWCSINEVEIYVSSET 148
            DG LND+PDSRWSCE A+     ECY TFDL     L  LT+YF+KS++ DR TNPF +S S D  T +  SF  +NT  TPLG GE+F+FP  S GRYVRFT  L DDQW S+NEVEIYV   T
Sbjct:    3 DGNLNDVPDSRWSCETALEGTEFECYATFDLGSSQSLIKLTIYFYKSNEEDRVTNPFVVSTSTDGTT-FTTSFEDINTIPTPLGEGEDFAFPTGSSGRYVRFTGDLADDQWLSVNEVEIYVDVAT 126
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig756.18817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTK7_9PHAE1.580e-4154.79F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
D7FRB9_ECTSI7.970e-4058.40F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 12..148
e-value: 3.5E-14
score: 55.0
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 13..143
IPR000421Coagulation factor 5/8 C-terminal domainPFAMPF00754F5_F8_type_Ccoord: 20..140
e-value: 8.7E-7
score: 29.1
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 1..145
score: 9.267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig756contigF-serratus_M_contig756:121574..130028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig756.18817.1mRNA_F-serratus_M_contig756.18817.1Fucus serratus malemRNAF-serratus_M_contig756 121573..130028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig756.18817.1 ID=prot_F-serratus_M_contig756.18817.1|Name=mRNA_F-serratus_M_contig756.18817.1|organism=Fucus serratus male|type=polypeptide|length=188bp
RTNSLVDDFRGCYETGCLPEYVLDGLLNDLPDSRWSCELAIVSAISECYM
TFDLQQPFILDGLTVYFFKSDDLDRATNPFNISISEDEVTGYVYSFTGVN
TAGTPLGTGENFSFPATSRGRYVRFTPILDDDQWCSINEVEIYVSSETLG
LTSAPTVAPTPLVTTVEEAADVTNVTVTASKYDNRTNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf
IPR000421FA58C