mRNA_F-serratus_M_contig756.18813.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: A0A6H5KVK0_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK0_9PHAE) HSP 1 Score: 213 bits (541), Expect = 2.100e-67 Identity = 96/173 (55.49%), Postives = 125/173 (72.25%), Query Frame = 1
Query: 19 RVMYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTIDGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPEQYLGI 537
R+ YNGHKR HA KFQG + PDG+ V L+GPV G RHD+++ SGL + + + G Y +YGDPAYGLS HL P+ A+S LTP+M +FN+RMS CRV+VEW F E++ WAF + K QQK LLSPVA QYRV+ L+N H+C+NGGN+IS YFG+ PPT E+Y+ +
Sbjct: 9 RLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 181
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.520e-65 Identity = 96/173 (55.49%), Postives = 125/173 (72.25%), Query Frame = 1
Query: 19 RVMYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTIDGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPEQYLGI 537
R+ YNGHKR HA KFQG + PDG+ V L+GPV G RHD+++ SGL + + + G Y +YGDPAYGLS HL P+ A+S LTP+M +FN+RMS CRV+VEW F E++ WAF + K QQK LLSPVA QYRV+ L+N H+C+NGGN+IS YFG+ PPT E+Y+ +
Sbjct: 158 RLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 330
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: A0A6H5KY46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY46_9PHAE) HSP 1 Score: 209 bits (532), Expect = 1.710e-65 Identity = 94/173 (54.34%), Postives = 123/173 (71.10%), Query Frame = 1
Query: 19 RVMYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTIDGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPEQYLGI 537
R+ YNGHKR HA KFQG + PDG+ V L+GPV G RH +++ GL + + + G Y +YGDPAYGLS HL P+ A+S LTP+M +FN+RMS CRV+VEW F E++ WAF + K QQK LLSPVA QYRV+ L+N H+C+NGGN+IS YFG+ PPT E+Y+ +
Sbjct: 58 RLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHHSFILAQFGLMEKLSMQNSPIGHPYYLYGDPAYGLSNHLVCPFSASSAGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 230
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI) HSP 1 Score: 212 bits (539), Expect = 5.370e-65 Identity = 98/178 (55.06%), Postives = 124/178 (69.66%), Query Frame = 1
Query: 7 VRQPRVMYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTI-DGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPEQYLGI 537
VR R YNGHKR HA KFQG + PDG+ V ++GPV G RHD+Y+ SGL Q + H G Y +YGDPAYGLS HL P+ A+S+ LTP M +FNQRMS CRV+VEW F E++ W F + K QQK LLSPV QY V+ L+N+H+CLNGGNQIS +F ++PPT ++YL +
Sbjct: 173 VRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVEWGFKEMTSKWTFVDMKPQQKYLLSPVGKQYLVATLLSNIHSCLNGGNQISQFFDVQPPTLQEYLKV 350
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE) HSP 1 Score: 218 bits (555), Expect = 4.350e-64 Identity = 100/176 (56.82%), Postives = 125/176 (71.02%), Query Frame = 1
Query: 10 RQPRVMYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTIDGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPEQYLGI 537
R R+ YN HK HAFKFQG V PDG+ L+GPV G RHD Y+ SGL Q + + G+ Y +YGDPAYGLS HL P+ A+S LTP++ +FN+R+SACRV+VEW F E+ WAF N K QQK LLSPVA QYRV+ L+N H+CLNGGN+IS YFG+ PP+ E+YLG+
Sbjct: 522 RWQRLFYNDHKGKHAFKFQGVVTPDGLFADLWGPVVGTRHDNYILAQSGLMQKLAMLNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVEWGFKEICNYWAFVNMKQQQKSLLSPVAVQYRVATLLSNWHSCLNGGNEISQYFGVGPPSFEEYLGV 697
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: A0A6H5JM46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM46_9PHAE) HSP 1 Score: 204 bits (519), Expect = 4.290e-62 Identity = 95/178 (53.37%), Postives = 121/178 (67.98%), Query Frame = 1
Query: 7 VRQPRVMYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTI-DGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPEQYLGI 537
+R R YNG+KR HA KFQG V PDG+ V LYG V G RHD ++ S L + +Q HM G Y +YG+PAYG + H+ P+ + N LTP M FN+ MS CRV+VEW F E++ WAF + K Q K LLSPVATQY+V+ L+N H+CLNGGNQIS YFG++PPT E+YL +
Sbjct: 164 IRNQRFFYNGYKRKHAIKFQGVVTPDGLFVELYGAVVGTRHDGHLLAQSALLEKLQTHMNSPSGHRYCLYGNPAYGQTDHIQCPFSVSVNGPLTPAMRNFNKSMSRCRVTVEWGFKEMTSKWAFIDMKCQHKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKL 341
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE) HSP 1 Score: 205 bits (522), Expect = 1.220e-61 Identity = 97/178 (54.49%), Postives = 121/178 (67.98%), Query Frame = 1
Query: 7 VRQPRVMYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTI-DGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPEQYLGI 537
+R R YNG+KR HA KFQG V PDG+ V LY G HD Y+ S L + +Q HM G Y VYGDPAYG + H+ P+ A+ N LTP M +FN+ MS CRV+VEW F E++ WAF + K QQK LLSPVATQY+V+ L+N H+CLNGGNQIS YFG++PPT E+YL +
Sbjct: 243 IRNKRFFYNGYKRKHAIKFQGVVTPDGLFVDLYDAEVGTTHDGYLLAESTLLEKLQTHMNSPSGHPYCVYGDPAYGQTDHIQCPFSASVNGPLTPAMRKFNKSMSQCRVTVEWGFKEMTSKWAFVDMKCQQKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 420
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: A0A6H5K0J0_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J0_9PHAE) HSP 1 Score: 198 bits (504), Expect = 6.670e-61 Identity = 92/168 (54.76%), Postives = 116/168 (69.05%), Query Frame = 1
Query: 19 RVMYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTIDGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPE 522
R+ YNGHKR HA KFQG + PDG+ V L+GPV G RHD++M SGL + + + G Y +YGDPAYGL HL P+ A+S TP+M +FN+R S CRV+VEW F E++ WAF N K QQK LLSPVA QYRV+ L+N H+C+NGGN+I YFG+ P T E
Sbjct: 88 RLFYNGHKRKHAMKFQGIITPDGLFVDLWGPVAGTRHDSFMLAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLRNHLVCPFSASSVGPFTPEMADFNKRTSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEIWQYFGVVPSTFE 255
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: A0A6H5JJ08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ08_9PHAE) HSP 1 Score: 201 bits (510), Expect = 2.010e-60 Identity = 91/173 (52.60%), Postives = 120/173 (69.36%), Query Frame = 1
Query: 19 RVMYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTIDGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPEQYLGI 537
R+ YNGHKR HA KFQG + PDG+ V L+GPV G RHD+++ SGL + + + G Y +YGDPAYGLS +L P+ A+S TP+M +FN+RMS CRV+VEW F E++ W N K QQK LSP+A QYRV+ L+N H+C+NGGN+IS YFG+ P T E+YL +
Sbjct: 196 RMFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNYLVCPFSASSVGPRTPEMADFNKRMSHCRVTVEWGFKEMTGKWVLVNMKPQQKFSLSPIAKQYRVATLLSNWHSCMNGGNEISQYFGVVPLTFEEYLAV 368
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Match: A0A6H5KH29_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH29_9PHAE) HSP 1 Score: 200 bits (509), Expect = 7.950e-60 Identity = 94/164 (57.32%), Postives = 115/164 (70.12%), Query Frame = 1
Query: 49 HAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQEHMTI-DGEAYQVYGDPAYGLSQHLCTPYKATSNSALTPQMCEFNQRMSACRVSVEWAFGEVSRLWAFCNYKHQQKCLLSPVATQYRVSVFLTNLHTCLNGGNQISDYFGMKPPTPEQYLGI 537
HA KFQG V PDG+ V L+G V G RHD+Y+ SGL Q + H G Y +YGDPAYGLS HL P+ A S LTP+M +FNQRMS CRV+VEW F E++ WAF + K QQK LLSPV QYRV+ L+N+H+CLNGGNQIS YF ++PPT E+YL +
Sbjct: 245 HAIKFQGVVTPDGLFVDLWGLVLGTRHDSYLLAQSGLMQKLAAHFNSPSGRPYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMADFNQRMSHCRVTVEWGFKEMTSKWAFVDMKSQQKYLLSPVGKQYRVATLLSNMHSCLNGGNQISQYFNLQPPTLEEYLKV 408 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig756.18813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig756.18813.1 >prot_F-serratus_M_contig756.18813.1 ID=prot_F-serratus_M_contig756.18813.1|Name=mRNA_F-serratus_M_contig756.18813.1|organism=Fucus serratus male|type=polypeptide|length=172bp MYNGHKRCHAFKFQGTVKPDGVIVSLYGPVEGARHDAYMYQISGLGQLMQback to top mRNA from alignment at F-serratus_M_contig756:86358..86897- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig756.18813.1 ID=mRNA_F-serratus_M_contig756.18813.1|Name=mRNA_F-serratus_M_contig756.18813.1|organism=Fucus serratus male|type=mRNA|length=540bp|location=Sequence derived from alignment at F-serratus_M_contig756:86358..86897- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig756:86358..86897- >mRNA_F-serratus_M_contig756.18813.1 ID=mRNA_F-serratus_M_contig756.18813.1|Name=mRNA_F-serratus_M_contig756.18813.1|organism=Fucus serratus male|type=CDS|length=1032bp|location=Sequence derived from alignment at F-serratus_M_contig756:86358..86897- (Fucus serratus male)back to top |