prot_F-serratus_M_contig754.18806.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig754.18806.1
Unique Nameprot_F-serratus_M_contig754.18806.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length646
Homology
BLAST of mRNA_F-serratus_M_contig754.18806.1 vs. uniprot
Match: D7FRL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL8_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 5.200e-129
Identity = 286/706 (40.51%), Postives = 364/706 (51.56%), Query Frame = 0
Query:    5 ESKEEDRPPPQSVVFSQTCWEYKTLLHKEITRPSGTILGKRRXXXXXXXNPHKRQAPDHGGSGRVPLTNNREVKTPTKKR----AKTDSLK---------STPIASLRELRETGITQASQVKWDIFVLVLQTSGLQQITSRAGLDIYVCTLLVADPTSSFFKVTLWRRAAKVGAELIHAGDLVRLNRRAGADNMIGVSTFRGTVQANSTQDTSFRVVWRGDSFTTHHDVAKFTMLPHAQSSRDGSGRRYLPDLAFSEEDPLAVSRERGCDLAAWAKREFPSVT-------------------------VTHADVYEVIQEGAAGQSIS-------------GSLGGVRKGTETTVRACVVQVTAVERLWTWESEKGKRRKDLVARATALLTDGHREMTLQLWGEKASEDTLTKLRAGVIV-GRGAFSTETNTALSGEAGRPVVFEFVRLRPEFSFSCEALVLN-MTGTGNFRILPSESPEAICVANAVARNNRATLGKLSVHLDSDVRMAN-----VGAAWYAENES---TWTRRFPSVAELVTDHGFSGVCLVEGVIVRKV--------GDPSLVGVLEGGKQLSSLPPVLHVFFGDPNESRESKTVSSKSS--YDAVVCVSVNGSALSDLLGGIPWELLTSGGANVGTHGARFGVAATELAQSLVDGLVGGGKQRERFDVILACSATEDANGHMIPGGFRYRLV 639
            E  ++D P PQ+VV SQTCWEYKTLL +E                     P +R+ P HG   R     + E+ TP ++R    AKT +           + P+A+LR   + G +      WD+FVLVLQ SGLQQ+TS+ G ++   TLLVAD + SFF++TLW R A+ G  L+ AGDLVR N        +GVS+FRGTVQA ST+ TSFRVVWRGD+FTT  +    TMLP  +     S R      A S+   L+VSRE  C LAAWAK EFPSVT                          T A V   ++E                     GSLG VR G ETTVRACVV+V+ VERLW W+   GKRRKDLV+RATALLTDG  EMTLQLWG+ AS++T+  LR  VI  G+   S     A  G   RP VFEF RL+P FSFSCEALVLN  +GT     +   S EA+                                   GA  +    +      RRF SVA L++  GFSG   +  V++RKV        G P   G       L S+ P + ++FGDP+E   +       S   +AV+ V+ +G AL +LLGG+P +LL  G  +  + G   G     + Q L+DGL  GG++ ER DV LACSA+ D NG +IPGG  YRL+
Sbjct:    2 EGDQDDEPYPQAVVLSQTCWEYKTLLDQESA-------------------PQQRRQPQHGK--RKEARKSIELGTPAERRWAKKAKTSASSGVREPRCAGTAPLATLRRAGK-GESSKDVGSWDVFVLVLQASGLQQVTSKRGSEVDFGTLLVADQSLSFFRLTLWGRTARAGGRLVRAGDLVRFNG-------VGVSSFRGTVQACSTRSTSFRVVWRGDAFTTPQEAPSTTMLPQGRPP-PASERS-----ALSQGGDLSVSREAACALAAWAKTEFPSVTSPEPPRGXXXXXXXXXXXQDLWNRHATAAGVLPSVEEAEGAXXXXXXXXXXXDAAFRPGSLGAVRNGVETTVRACVVEVSEVERLWIWKYAGGKRRKDLVSRATALLTDGRHEMTLQLWGDMASDETIDSLRGRVITAGKNGVS-----ARDGAMERPAVFEFTRLQPSFSFSCEALVLNGKSGTATH--MDRGSAEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSCAGAPSFLAQGAGAPASARRFESVAALMSADGFSGAGYLANVVIRKVCAPWLSAAGPPGEHGRTASLPSLGSVAPPVVIYFGDPDEPVPAAAAGDARSAGVEAVLGVTADGGALHELLGGVPLDLLAVGSGS-SSRGGMAGDVGRRVVQCLLDGLEVGGRRGERVDVALACSASADENGRLIPGGSSYRLI 664          
BLAST of mRNA_F-serratus_M_contig754.18806.1 vs. uniprot
Match: A0A6H5KGT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT9_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 3.420e-123
Identity = 285/699 (40.77%), Postives = 361/699 (51.65%), Query Frame = 0
Query:   10 DRPPPQSVVFSQTCWEYKTLLHKEITRPSGTILGKRRXXXXXXXNPHKRQAPDHG--GSGRVPLTNNREVKTPT-KKRAKTDSLKST---------PIASLRELRETGITQASQVKWDIFVLVLQTSGLQQITSRAGLDIYVCTLLVADPTSSFFKVTLWRRAAKVGAELIHAGDLVRLNRRAGADNMIGVSTFRGTVQANSTQDTSFRVVWRGDSFTTHHDVAKFTMLPHAQSSRDGSGRRYLPDLAFSEEDPLAVSRERGCDLAAWAKREFPSVTVT------------------HADVYEVI----QEGAAGQSIS------------GSLGGVRKGTETTVRACVVQVTAVERLWTWESEKGKRRKDLVARATALLTDGHREMTLQLWGEKASEDTLTKLRAGVIV-GRGAFSTETNTALSGEAGRPVVFEFVRLRPEFSFSCEALVLNMTGTGNFRILPSESPEAICVANAVARNNRATLG-----KLSVHLDSDVRMANVGAAWYAENEST--WTRRFPSVAELVTDHGFSGVCLVEGVIVRKVGDP--SLVGVLEGGKQLSSLP------PVLHVFFGDPNESRESKTVSSKSSYDA-------VVCVSVNGSALSDLLGGIPWELLTSGGANVGTHGARFGVAATELAQSLVDGLVGGGKQRERFDVILACSATEDANGHMIPGGFRYRLV 639
            D P PQ+VV SQTCWEYKTLL +E   P                   +R+ P+HG     R  +        P   K+AKT +  S          P+A+LR+  + G T      WDIFVLVLQ SGL+Q+TS+ G ++   TLLVAD + SFF++TLW R A+ G  L+ AGDLVR N        IGVS+F+GTVQA ST+ TSFRVVWRGD+FTT  +    TMLP  +     S R  L     S+   LAVSRE  C LAAWAK EFPS+T                    HA    V     +EG  G                GSLG  R G  TTVRACVV+V+ VERLW WES  GKRRKDLV+RATALLTDG  EMTLQLWG+ AS++T+  LR   I  G+   S    T       RP VFEF RL+P FSFSCE LVLN   +G    +   S EA+                    +  V L +         ++ A+        RRF SVA L++  GFSG   ++ V+VRKV  P  S  G  +   + +SLP      P + ++ GD +E   +   ++  + DA       VV V+ +G AL +LLGG+P +LL  G    G+     G     + Q L+DGL  GG++ ER DV LACSA+ D NG  IPGG  YRL+
Sbjct:    7 DDPYPQAVVLSQTCWEYKTLLDQESAPP-------------------QRRQPEHGKRDESRKSIALGTPPSEPRWAKKAKTSASSSVREPWCAGMAPLATLRQAGK-GETSKGVGSWDIFVLVLQASGLEQVTSKRGSEVDFGTLLVADQSLSFFRLTLWGRTARAGGRLVRAGDLVRFNG-------IGVSSFQGTVQACSTRKTSFRVVWRGDAFTTPQEAPSTTMLPLGRPP-PASERSPL-----SQGGDLAVSREAACALAAWAKTEFPSITSPEPPRGXXXXXXXQHLCNRHAAAPGVSPLMEEEGGVGADSGDAAAAGDAAFRPGSLGAARNGVGTTVRACVVEVSEVERLWMWESAGGKRRKDLVSRATALLTDGRHEMTLQLWGDMASDETIDSLRGRAIAAGKNDVSAHDRTM-----ERPAVFEFTRLQPSFSFSCETLVLNGK-SGTVTQMDRGSAEAVSXXXXXXXXXXXXXXXXXDERAPVSLATAKSSCAGSPSFLAQGAGAPASARRFESVAALMSADGFSGAGYLDNVVVRKVCAPWLSAAGSPDEHGRAASLPSLGGVAPPVVIYLGDLDEPVPAAAAAAAGTCDAWSAGVEAVVGVTADGGALHELLGGVPLDLLAVGSGR-GSRRGMAGDVGRGVVQCLLDGLEVGGRRGERVDVALACSASADENGRFIPGGSSYRLI 665          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig754.18806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRL8_ECTSI5.200e-12940.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGT9_9PHAE3.420e-12340.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 106..218
e-value: 2.2E-6
score: 29.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 110..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig754contigF-serratus_M_contig754:96949..99589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig754.18806.1mRNA_F-serratus_M_contig754.18806.1Fucus serratus malemRNAF-serratus_M_contig754 96832..99589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig754.18806.1 ID=prot_F-serratus_M_contig754.18806.1|Name=mRNA_F-serratus_M_contig754.18806.1|organism=Fucus serratus male|type=polypeptide|length=646bp
MEKEESKEEDRPPPQSVVFSQTCWEYKTLLHKEITRPSGTILGKRRQEQH
HHHNPHKRQAPDHGGSGRVPLTNNREVKTPTKKRAKTDSLKSTPIASLRE
LRETGITQASQVKWDIFVLVLQTSGLQQITSRAGLDIYVCTLLVADPTSS
FFKVTLWRRAAKVGAELIHAGDLVRLNRRAGADNMIGVSTFRGTVQANST
QDTSFRVVWRGDSFTTHHDVAKFTMLPHAQSSRDGSGRRYLPDLAFSEED
PLAVSRERGCDLAAWAKREFPSVTVTHADVYEVIQEGAAGQSISGSLGGV
RKGTETTVRACVVQVTAVERLWTWESEKGKRRKDLVARATALLTDGHREM
TLQLWGEKASEDTLTKLRAGVIVGRGAFSTETNTALSGEAGRPVVFEFVR
LRPEFSFSCEALVLNMTGTGNFRILPSESPEAICVANAVARNNRATLGKL
SVHLDSDVRMANVGAAWYAENESTWTRRFPSVAELVTDHGFSGVCLVEGV
IVRKVGDPSLVGVLEGGKQLSSLPPVLHVFFGDPNESRESKTVSSKSSYD
AVVCVSVNGSALSDLLGGIPWELLTSGGANVGTHGARFGVAATELAQSLV
DGLVGGGKQRERFDVILACSATEDANGHMIPGGFRYRLVRFRVCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold