mRNA_F-serratus_M_contig753.18795.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 328 bits (841), Expect = 8.760e-98 Identity = 227/703 (32.29%), Postives = 343/703 (48.79%), Query Frame = 1
Query: 136 LSATEKEEQTRRYVAMCAVDLHPFSMLNSAAFQWYLGGYSPSFITEKPHHTTINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHSTEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTRH-LSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALE----------DPVQEIRCLQPWDGPKKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPA-RPDRLARIRAKKNLLVARRST---------IPSASETRMDAGLREFSEYMAEAAFANNSEFDLFEYWRARAVDGVDAS-GKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELESLKEERDGAAGAAFIAKTTDVANNIAL*VEQTD 2178
++ K+ RR+V C +DL P + F+ +LG SP ++T +T N+ LDEL V + +L E +G++GP++ Q+D+T+ E++T + ++ M R+ +AFPG +A++I+PW+ ++T+E F+ +GE +PS +++ TVDQG N +N T +GV V C+ HR T V WALGI+G R +N L+ K+ M GVF HS NNDELKE+Q + +L+ NDTRW SQ M+ RVL L I EYF ++ + R L P EW E+ S+L D + + +M QG VGQA+ ILH +E P + L P P + L + VL L ++M ++G+G A ER++ +DPRL+S NG L++ DD+ A FD VG A +AP+PA P + PA + +L+R+ ++ VA +T S S TR RE Y+AE + F++ YW R D V A+ GKV PA P+L +AR++ GI+ TSCQAERNFS+L ++ LR ++ K+E+++F+RLN HL+ VREL D A A AKT +++A E+ +
Sbjct: 5 MTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGES--VQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGR---------LNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRM-QGSVDTHVGQAM---FILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKFD-------VGPA---------------TAAPAPA---------------PVMNLDRVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAE----VREL-------DAAVVKAKAAKTKVAQSSMAAQEERAN 644
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 330 bits (847), Expect = 1.150e-96 Identity = 228/702 (32.48%), Postives = 342/702 (48.72%), Query Frame = 1
Query: 136 LSATEKEEQTRRYVAMCAVDLHPFSMLNSAAFQWYLGGYSPSFITEKPHHTTINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHSTEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTRH-LSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALE----------DPVQEIRCLQPWDGPKKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLARIRAKKNLLVARRST---------IPSASETRMDAGLREFSEYMAEAAFANNSEFDLFEYWRARAVDGVDAS-GKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELESLKEERDGAAGAAFIAKTTDVANNIAL*VEQTD 2178
++ K+ RR+V C +DL P + F+ +LG SP ++T +T N+ LDEL V + +L E +G++GP++ Q+D+T+ E++T + ++ M R+ +AFPG +A++I+PW+ ++T+E F+ +GE +PS +++ TVDQG N +N T +GV V C+ HR T V WALGI+G R +N L+ K+ M GVF HS NNDELKE+Q + +L+ RNDTRW SQ M+ RVL L I EYF ++ + R L P EW E+ S+L D + + +M QG VGQA+ ILH +E P + L P P + L + VL L ++M ++G+G A ER++ +DPR KS NG L++ DD+ A FD VG A +AP+PA DP P + +L+R+ ++ VA +T S S TR RE Y+AE + F++ YW R D V A+ GKV PA P+L +AR++ GI+ TSCQAERNFS+L ++ LR ++ K+E+++F+RLN HL+ VREL D A A AKT +++A E+ +
Sbjct: 200 MTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGES--VQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGR---------LNPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRM-QGSVDTHVGQAM---FILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKFD-------VGPA---------------TAAPAPAPVMN---------LDPVEPAP-----KKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAE----VREL-------DAAVVKAKAAKTKVAQSSMAAQEERAN 839
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 304 bits (779), Expect = 4.590e-87 Identity = 207/667 (31.03%), Postives = 325/667 (48.73%), Query Frame = 1
Query: 136 LSATEKEEQTRRYVAMCAVDLHPFSMLNSAAFQWYLGGYSPSFITEKPHHTTINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHSTEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTR--HLSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALE------DPVQEIRCLQPWDGPKKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPA-RPDRLARIRAKKNLLVARRSTIPSASETRMDAGL--------REFSEYMAEAAFANNSEFDLFEYWRARAVDGV-DASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELES 2082
L +E R+V C ++L P M + F+ +LG SP ++ + T +++LD L S V+ I L E +G++G ++ Q+D+T+ E++T + +++ + RV +AFPG +AD+I PW+ ++T E F +GE EP +++ TVDQGGN +N +GVPV C+ HR T V WALGI+G R N L+ K+ + GVF HS NND+LKE+Q +L L+ RNDTRW SQ M+ R+L L I EYF H SR+ P EW E+ S+L D + + +M QG + + QA+ I+H +E P++ +P +E+ L + VL L+ ME++ +G+A + ER++ +DPR KS A NG L++ +D+ A FD +P S P+PA A P V PA + +L+R+ ++ VA S ++ + RE Y+AE +F++ +W R D V +G V PA P+L +AR+F GI+ +SCQAERNFS+L ++ LR ++ + K+E+++ +RLN HL+ VREL++
Sbjct: 198 LDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGED--VEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGRR---------NKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQP-EWTITNEVCSLLSDVSEVTIRM-QGAKDTHISQAM---FIIHEVMEMLREDSHPIRAQNATEP-----EEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQFD--VQP----------------------SEPAPAPA-------------PVLNVDPVEPASKRKKLSRLEERRAARVAAASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDE----VRELDA 802
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 301 bits (772), Expect = 4.610e-86 Identity = 245/750 (32.67%), Postives = 370/750 (49.33%), Query Frame = 1
Query: 1 HPAEHKAALKDSRHTSEGKAKRAMDASGVEPPSKRGTPL-------------DLLQC--PLSATEKEEQTRRYVAMCAVDLHPFSMLNSAAFQWYLGGYSPSFITEKPHHTTINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHSTEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQ--------VTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFT-RHLSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALEDPVQEIRCL-QPWDGP---KKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLARIRAKKNLLVARRSTIPSASETRMDAGL-REFSEYMAEAAFANNSEFDLFEYWRARAVDGVDASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELESLKE--ERDGAAGAAFIAKTTDVANNIA 2157
HPA +KA + D T++G+A A + P+ + T D +Q PL A+ + RR+V CA+++ P +M ++ ++G P ++ T N L + + D + L ES K+G+ GP++ Q+D+T+ + E++T S ++I+ + RV T+AFPG +A +IEPW+ + +T E F ++GE +P +++ TVDQGGN +N + V V C+AHR + WALGI+G+ R N +KL+ ++ + GVF HS NNDELK+IQ E +L+ RNDTRW SQHAM+ R+L+L AI EYF + R L EW E+ S+LD A + + +QG + Q + + + V +IR QP++ K+++ L V ++ +MEK+ LG A ERI LDPR K C + +NG L+ + DV + F +G+A XXXXXXXXXXXXX P+P V + + R RL R+ AK A R+ + S R A + RE Y+AE +F L E+W+ R+ A VEP PHL L+AR+F GI++TSCQAERNFS+L ++ LR+S+ K+E+++FLRLN IP E+++L + E + AA A K V A
Sbjct: 120 HPALYKALMDDHTTTAQGRANVAAAVAFDPKPTGKATGKGKGKAGSSTPSIKDYMQTGNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGEN--VQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGE-------NPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVK-IQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF----AEADLGSASSXXXXXXXXXXXXXNQ-PAPK----------------KQKVLSDLEER--RLQRL-AKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIP-------EVKALHDAVEANKAAAARCQEKVAQVEAEAA 827
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 224 bits (570), Expect = 1.280e-60 Identity = 190/540 (35.19%), Postives = 271/540 (50.19%), Query Frame = 1
Query: 562 QVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFT-RHLSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALEDPVQEIRCL-QPWDGP---KKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLARIRAKKNLLVARRSTIPSASETRMDAGL-REFSEYMAEAAFANNSEFDLFEYWRARAVDGVDASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELESLKE--ERDGAAGAAFIAKTTDVANNIA 2157
Q+T E F ++GE +P +++ TVDQGGN +N + V V C+AHR + WALGI+G+ R N +KL+ ++ + GVF HS NNDELK+IQ E +L+ RNDTRW SQHAM+ R+L+L AI EYF + R L EW E+ S+LD A + + +QG + Q + + + V +IR QP++ K+++ L V ++ +MEK+ LG A ERI LDPR K C + +NG L+ + DV + F +G+A XXXXXXXXXXXXX P+P V + + R RL R+ AK A R+ + S R A + RE Y+AE +F L E+W+ R+ A VEP PHL L+AR+F GI++TSCQAERNFS+L ++ LR+S+ K+E+++FLRLN IP E+++L + E + AA A K V A
Sbjct: 2 QLTTEFFADMMGEN--VQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGE-------NPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVK-IQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF----AEADLGSASSXXXXXXXXXXXXXNQ-PAPK----------------KQKVLSDLEER--RLQRL-AKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIP-------EVKALHDAVEANKAAAARCQEKVAQVEAEAA 499
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: D7G031_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G031_ECTSI) HSP 1 Score: 206 bits (523), Expect = 1.160e-51 Identity = 221/813 (27.18%), Postives = 340/813 (41.82%), Query Frame = 1
Query: 133 PLSATEKEEQTRRYVAMCAVD-LHPFSMLNSAAFQWYLGGYSPSF-------------------------ITEKPHHT----TINRHLDELCSGVRDGITAQLVAQYESVKKVGWTGPWVSIQVDVTSTHS--------------TEFVTVSFAWISPDWMRMERVNYCTKAFPGRQSADEIEPWLRQVTIEAFTPVLGEGNPCEPSAIYVGATVDQ----GGNTMN-TFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGA--DSCMNLGCKKLISKVTTMAGVFKH------------------SVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTRHLSRRALFPLEWQAVLELVSILDDPARINKQM-------------VQGGRHA----------------------------------FVGQAINDFAILHAALEDPVQEIR--------------------CLQPWDGPKKEVSASTLQPHVRLVLTELVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLARIRAKKNL----------------------------LVARRSTIPSASETRMDAGLR-EFSEYMAEAAFANNSEFDLFEYWRARAVDGVDA-SGKVVEPARWPHLGLVARVFAGIDTTSCQAERNF-------SSLKSVVSDL-RASLGAEKIEKILFLRLNSHLIP 2049
P+SA + RR+V MCA+ L P S+ + + ++GG +P + +TE + T N L +LC+GVR + + L A ES +++GW+GP+V +QVD T E T S +++S D+ + R+ + F GRQ + E W+R++T + FT + + EP IY+ AT+ GG++ F MGVPV +CS++R + V+ +LG AA+GGA D C N + ++ + +M VF+H AL + TRW HA+ +R+L+L ++ +F + + R+L P EWQA+ E SIL+ + ++ + GR A F+ ++I A LH + P+Q+IR P + L P + +L + + ME+ GLGRA + E +++ LDPR K CC + C++GG L+ VS+Q F P AGXXXXXXXXXXXXXXX XXXX RL ++R + + +P + R+ R E EY+ E A + +L YWR D +D+ +G+VV ARWPHL LVAR++AGID+TS Q ER+F + L + V L R + +IE++L +RLN H++P
Sbjct: 121 PMSAEDCLPHDRRFVLMCALQTLDPGSLCSDLGHRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGARAAGTANAILQDLCAGVRREVASALRAHSESCRRLGWSGPFVGLQVDSTGLPGGEGXXXXXXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRQMSHAKETWIRELTADLFTSICHKS---EPKDIYLAATIGGCSGGGGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLGC-----AAAGGAGEDKCANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAALARARGSTTRWTDSHALFERLLQLAGPLNAHFRQAPTDRSLQPSEWQAIRETASILEPALEVLAKVHAREEGXXXXXXXXEEGRRAAEGVGTSAAAAACNGGDRGAAGAAARDKKKPRGIFLAESIELHANLHCSFIYPLQDIRGDALATAATGEGVAAAPAMVAAGAGAAPFCSKRVAELTPEAQALLEAVAEGMEESGLGRAREDTEAVSMLLDPRFKQCCASTCVDGGSALKLRALKAVSSQLRKFRD-----PASEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-----------------SRLDKMRQAQKMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGEVDNRLSEDARAELEEYLLEPA---SKRHELLSYWRLHGTDTLDSGTGEVVLAARWPHLALVARLYAGIDSTSRQGERHFGGGSGGGAELGAAVRSLQRGGMPPWRIEQMLLVRLNRHVVP 900
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 184 bits (467), Expect = 2.570e-46 Identity = 162/538 (30.11%), Postives = 239/538 (44.42%), Query Frame = 1
Query: 562 QVTIEAFTPVLGEGNPCEPSAIYVGATVDQGGNTMNTFTRMGVPVGICSAHRGGTCVTWALGISGTDRAASGGADSCMNLGCKKLISKVTTMAGVFKHSVGNNDELKEIQLEVLELDQALDLVLRNDTRWGSQHAMLQRVLRLYPAIHEYFTR-------HLSRRALFPLEWQAVLELVSILDDPARINKQMVQGGRHAFVGQAINDFAILHAALE------DPVQEIRCLQPWDGPKKEV-------------SASTLQPHVRLVLTE-------LVKQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPA-RPDRLARIRAKKNLLVARR-------STIPSASETRMDAGL-REFSEYMAEAAFANNSEFDLFEYWRARAVDGV-DASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLI 2046
Q+T E F +GE EPS +++ TVDQGGN +N T +GV V C+ HR + V WALGI+G+ A +C N L+ K+ + GVF S NN LKE+Q +L + +L+ RNDT SQ M+ R+L L I EYF R +R L EW E+ S+L D + I + +QG + + QA+ ++H +E P++ + P +V ST HV + TE L++ ME++G+G+A ER++ LDPR K NG E L+ A D+ F + P P+PA A P V PA + + +RI + P T + RE Y+AE + F+L +W R + V +GKV PA P+L +AR+ GI+ TSCQAERNFS+L ++ LR ++ A K+E+++ +RLN HL+
Sbjct: 6 QLTKEYFGGFMGES--VEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGS-------ATTCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIR-IQGAQDTHISQAM---FLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATFTAESVP------------------------PTPAPA-------------PVVDVQPAEPALKKKKFSRIEEXXXXXXXXXXXXXXXXTVAPQTPVTGRHVLIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLL 489
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5L256_9PHAE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L256_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 7.010e-17 Identity = 76/262 (29.01%), Postives = 119/262 (45.42%), Query Frame = 1
Query: 1297 KQMEKRGLGRATTEAERINLALDPRLKSCCEAVCLNGGEQLQQAVRDDVSAQFLAFDGSARPRPVGAAGXXXXXXXXXXXXXXXSAPSPAGASAGQXXXXXGAADPSTTVPTPVPARPDRLA-----RIRAKK-NLLVARRSTIPSASETRMDAGLREFSEYMAEAAFANNSEFDLFEYWRARAVDGVDASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKV 2064
++ +KR +G + E + L DPR K + VC GGE Q+ + +S + + P GAA P PA A TP P + R+A R +A+K A R++ + D +E EY A ++D+ +WR +D G VV A++P L ++ARV+ ID+TSCQ+ER FS L V ++LR ++ +++E ++FLR N HLIP + K+
Sbjct: 41 EEFKKRNIGTPVEDVEFLALFFDPRSKDFGKGVC--GGEGGQEKALEALSTVSMNLVDTVEPG--GAA----------------DVPVPAAA-------------------TPPPEKRARVATTAYERRQARKVQEAAAARTSARRDQPSVTDRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSNPHLIPEINKL 263
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 3.430e-16 Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 1
Query: 1747 REFSEYMAEAAFANNSEFDLFEYWRARAVDGV-DASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVRELES 2082
RE Y+AE +F++ +W R D V +G V PA P+L +AR+F GI+ +SCQAERNFS+L ++ LR ++ + K+E+++ +RLN HL+ VREL++
Sbjct: 129 REVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDE----VRELDA 237
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Match: A0A6H5L902_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L902_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 1.210e-14 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1747 REFSEYMAEAAFANNSEFDLFEYWRARAVDGVDASGKVVEPARWPHLGLVARVFAGIDTTSCQAERNFSSLKSVVSDLRASLGAEKIEKILFLRLNSHLIPGLGKVVREL-ESLKEERDGAAGAAFI 2124
+E EY A ++D+ +WR +D G VV A++P L ++ARV+ ID+TSCQ+ER FS L V ++LR ++ +++E ++FLR N HLIP + K+ L + L + G A AA +
Sbjct: 160 KEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSNPHLIPEINKLDNGLGKLLAAQAVGKAKAASV 286 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig753.18795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig753.18795.1 >prot_F-serratus_M_contig753.18795.1 ID=prot_F-serratus_M_contig753.18795.1|Name=mRNA_F-serratus_M_contig753.18795.1|organism=Fucus serratus male|type=polypeptide|length=698bp MDASGVEPPSKRGTPLDLLQCPLSATEKEEQTRRYVAMCAVDLHPFSMLNback to top mRNA from alignment at F-serratus_M_contig753:112766..117501- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig753.18795.1 ID=mRNA_F-serratus_M_contig753.18795.1|Name=mRNA_F-serratus_M_contig753.18795.1|organism=Fucus serratus male|type=mRNA|length=4736bp|location=Sequence derived from alignment at F-serratus_M_contig753:112766..117501- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig753:112766..117501- >mRNA_F-serratus_M_contig753.18795.1 ID=mRNA_F-serratus_M_contig753.18795.1|Name=mRNA_F-serratus_M_contig753.18795.1|organism=Fucus serratus male|type=CDS|length=4188bp|location=Sequence derived from alignment at F-serratus_M_contig753:112766..117501- (Fucus serratus male)back to top |