prot_F-serratus_M_contig752.18788.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig752.18788.1
Unique Nameprot_F-serratus_M_contig752.18788.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length316
Homology
BLAST of mRNA_F-serratus_M_contig752.18788.1 vs. uniprot
Match: A0A6H5KSR4_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR4_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.190e-33
Identity = 104/230 (45.22%), Postives = 145/230 (63.04%), Query Frame = 0
Query:    3 GATVAPEEGA-KKELSYVQLKGYVQKARSKIKKLEEEKKVLQGQAEESSAAQRADAGLVASLREEVELWKTNFQQQIEASATASRATESPNGEEAHNGDSESPRLRQALQEAEEAREEAERWKEKALAAQEFQARFLAVEEELNETRVDSQRAEQELRTSHEKKRADLEDANQALLDAKSAIEAQLGQEREAAETSSTELQAQADTLIRNAGALEHHLSTARQERDQAVA 231
            G   AP +GA KK LS  QLK Y++KAR+KI +LEE+ K           A   DAGL++SLREEVE WK  FQ+Q+EA+A A+ A E           S++  + QAL++  +A+EE  RWKEKA+AAQE + RFL +EEEL +T+  S+ A++ L+  H+++ A LE    +L    SA EAQ  ++  AAE +S   Q Q ++L+R+AG LEH L   +QERD+AVA
Sbjct:    7 GEAAAPSDGAAKKGLSNDQLKAYIRKARAKITELEEQNK-----------ASAVDAGLLSSLREEVEAWKAKFQEQVEATAAAATAAEP----------SDADGMEQALRDVVQAQEETSRWKEKAVAAQELEVRFLGMEEELQQTKASSELAQENLKALHQEECARLEAVIDSLRQEISASEAQ--RQASAAEAASKS-QEQVESLLRDAGLLEHRLVGVQQERDEAVA 212          
BLAST of mRNA_F-serratus_M_contig752.18788.1 vs. uniprot
Match: D8LKN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN4_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 4.850e-26
Identity = 82/174 (47.13%), Postives = 118/174 (67.82%), Query Frame = 0
Query:   58 GLVASLREEVELWKTNFQQQIEASATASRATESPNGEEAHNGDSESPRLRQALQEAEEAREEAERWKEKALAAQEFQARFLAVEEELNETRVDSQRAEQELRTSHEKKRADLEDANQALLDAKSAIEAQLGQEREAAETSSTELQAQADTLIRNAGALEHHLSTARQERDQAVA 231
            GL++SLREEVE+WK  FQ+Q+EA+A A+ A E         GD++   L QAL +A +A+EEA RWKEKA+AAQE + RFL +EEEL +T+   + A++ L+ SH+++ A LE   ++L    SA EAQ  ++  AAE +S   Q Q ++ +R+AG+LEH L   +QERD+AVA
Sbjct:    4 GLLSSLREEVEVWKAKFQEQVEATAAAAGAAEP--------GDADG--LEQALSDAAQAQEEASRWKEKAVAAQELEVRFLGMEEELQQTKASGELAQENLKASHQEECARLEAVVESLRQEVSASEAQ--RQASAAEAASKS-QEQVESFLRDAGSLEHRLVGVQQERDEAVA 164          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig752.18788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSR4_9PHAE1.190e-3345.22GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKN4_ECTSI4.850e-2647.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 296..316
NoneNo IPR availableCOILSCoilCoilcoord: 219..281
NoneNo IPR availableCOILSCoilCoilcoord: 18..52
NoneNo IPR availableCOILSCoilCoilcoord: 137..186
NoneNo IPR availableCOILSCoilCoilcoord: 106..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig752contigF-serratus_M_contig752:262352..277817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig752.18788.1mRNA_F-serratus_M_contig752.18788.1Fucus serratus malemRNAF-serratus_M_contig752 262329..277817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig752.18788.1 ID=prot_F-serratus_M_contig752.18788.1|Name=mRNA_F-serratus_M_contig752.18788.1|organism=Fucus serratus male|type=polypeptide|length=316bp
MDGATVAPEEGAKKELSYVQLKGYVQKARSKIKKLEEEKKVLQGQAEESS
AAQRADAGLVASLREEVELWKTNFQQQIEASATASRATESPNGEEAHNGD
SESPRLRQALQEAEEAREEAERWKEKALAAQEFQARFLAVEEELNETRVD
SQRAEQELRTSHEKKRADLEDANQALLDAKSAIEAQLGQEREAAETSSTE
LQAQADTLIRNAGALEHHLSTARQERDQAVAHSEELEKEVGRLEEDLEKD
SKERAELESRREELERALERAQATAAATVKEKEDEGELVAEAFRARDEAL
EGLAAARVELNELKER
back to top